BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016047
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511787.1| DNA binding protein, putative [Ricinus commu...   374   e-101
ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vit...   374   e-101
ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago...   373   e-101
ref|XP_004144985.1| PREDICTED: flap endonuclease GEN-like 1-like...   355   1e-95
ref|XP_002889348.1| hypothetical protein ARALYDRAFT_311256 [Arab...   353   4e-95

>ref|XP_002511787.1| DNA binding protein, putative [Ricinus communis]
           gi|223548967|gb|EEF50456.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 609

 Score =  374 bits (960), Expect = e-101
 Identities = 188/275 (68%), Positives = 224/275 (81%), Gaps = 3/275 (1%)
 Frame = +2

Query: 119 MGVGGGFWEILKPYARNENFDFLQNKKVAVDLSYWIVQHETALKNKARNPHLRLTFFRTI 298
           MGVGG FW+ILKPY R+E  DFL+ K+VA+DLSYWIVQHETA+K+ AR PHLRLTFFRTI
Sbjct: 1   MGVGGKFWDILKPYTRHEGPDFLREKRVAIDLSYWIVQHETAIKSYARKPHLRLTFFRTI 60

Query: 299 NLFSKLGAFPVFVTDGTPSPLKARARMERFYRLTGLDVRKV---EDGVSVERNRAFQKCV 469
           NLFSK GAFPVFV DGTPSPLK+RAR+ RF+R +G+D   +   E+GVSVERN AF KCV
Sbjct: 61  NLFSKFGAFPVFVVDGTPSPLKSRARISRFFRSSGIDSSVLPTPEEGVSVERNGAFLKCV 120

Query: 470 RECVXXXXXXGIPVLKARCEAEELCAQLNSEGHVDACITADSDAFLYGAKCVIKCLRPSS 649
           +ECV      G+PVLKA  EAE LCAQLNS+G VDACITADSDAFL+GAKCVIK ++P+S
Sbjct: 121 KECVELLELFGMPVLKANGEAEALCAQLNSQGLVDACITADSDAFLFGAKCVIKSIKPNS 180

Query: 650 KEPFECYYMSDLEAGLGLKQVHLVAISLLVGNDHDLGGVSGIGIETALRFVRMFPEEEIL 829
           KEPFECY MSD+E+GL LK+ HL+AI+LLVGNDHDL GV GIG++TALRFV+ F E+EIL
Sbjct: 181 KEPFECYQMSDIESGLALKRKHLIAIALLVGNDHDLNGVQGIGVDTALRFVQTFHEDEIL 240

Query: 830 NRLHDIGNGDIPLFQIDSRSVGDCDLPNPNENSPK 934
           N L +IG G+  +F   SR V D  + +P+ENS K
Sbjct: 241 NCLREIGKGNTNIFLGVSRVVEDL-MIDPHENSLK 274


>ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vitis vinifera]
           gi|296089141|emb|CBI38844.3| unnamed protein product
           [Vitis vinifera]
          Length = 667

 Score =  374 bits (959), Expect = e-101
 Identities = 188/275 (68%), Positives = 224/275 (81%), Gaps = 3/275 (1%)
 Frame = +2

Query: 119 MGVGGGFWEILKPYARNENFDFLQNKKVAVDLSYWIVQHETALKNKARNPHLRLTFFRTI 298
           MGVGG FWE+LKPYAR E FD+++NK+VAVDLS+WIVQ ETA K   RNPHLRLTFFRTI
Sbjct: 1   MGVGGSFWELLKPYARPEGFDYIRNKRVAVDLSFWIVQQETATKANVRNPHLRLTFFRTI 60

Query: 299 NLFSKLGAFPVFVTDGTPSPLKARARMERFYRLTGLDVRK---VEDGVSVERNRAFQKCV 469
           NLFSK GAFPVFV DGTPSPLK++AR+ RF+R +G+D+     VE+GVSVERN  F + V
Sbjct: 61  NLFSKFGAFPVFVVDGTPSPLKSQARIARFFRGSGIDLSGLPVVEEGVSVERNAEFSRRV 120

Query: 470 RECVXXXXXXGIPVLKARCEAEELCAQLNSEGHVDACITADSDAFLYGAKCVIKCLRPSS 649
           +ECV      GIPVLKAR EAE LCAQLNSEGHVDACITADSDAFL+GAKCVIKCLRP+ 
Sbjct: 121 QECVELLELLGIPVLKAREEAEALCAQLNSEGHVDACITADSDAFLFGAKCVIKCLRPNC 180

Query: 650 KEPFECYYMSDLEAGLGLKQVHLVAISLLVGNDHDLGGVSGIGIETALRFVRMFPEEEIL 829
           KEP ECY+MSD+E+GLGLK+ HL+AISLLVGND+DL GV GIG++TA+RFV+ F E+EIL
Sbjct: 181 KEPLECYHMSDIESGLGLKRKHLIAISLLVGNDYDLNGVQGIGLDTAVRFVQGFSEDEIL 240

Query: 830 NRLHDIGNGDIPLFQIDSRSVGDCDLPNPNENSPK 934
           NRL + GNG   +F    +S+ D  +P  +E SP+
Sbjct: 241 NRLQEKGNG-ATVFDGAVKSMDD-SIPCLDEKSPR 273


>ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago truncatula]
           gi|124360235|gb|ABN08248.1| Helix-hairpin-helix motif,
           class 2 [Medicago truncatula]
           gi|355498862|gb|AES80065.1| Flap endonuclease GEN-like
           protein [Medicago truncatula]
          Length = 612

 Score =  373 bits (957), Expect = e-101
 Identities = 179/273 (65%), Positives = 218/273 (79%), Gaps = 3/273 (1%)
 Frame = +2

Query: 119 MGVGGGFWEILKPYARNENFDFLQNKKVAVDLSYWIVQHETALKNKARNPHLRLTFFRTI 298
           MGVGG FWE+LKPY+RNE FDFL+NK+VA+DLS+WIVQH  A+K   + PHLRLTFFRTI
Sbjct: 1   MGVGGNFWELLKPYSRNEGFDFLRNKRVAIDLSFWIVQHNNAIKTHVKKPHLRLTFFRTI 60

Query: 299 NLFSKLGAFPVFVTDGTPSPLKARARMERFYRLTGLDVRKV---EDGVSVERNRAFQKCV 469
           NLFSK GAFPVFV DGTPSPLK++AR+ RF+R +G++   +   E+GVS  RN  F +CV
Sbjct: 61  NLFSKFGAFPVFVVDGTPSPLKSQARIARFFRSSGIESTSLPVAEEGVSAGRNSTFSRCV 120

Query: 470 RECVXXXXXXGIPVLKARCEAEELCAQLNSEGHVDACITADSDAFLYGAKCVIKCLRPSS 649
           +ECV      GIPVLKA+ EAE LCAQLNSEGHVDACIT DSDAFL+GAKC+IK   P+S
Sbjct: 121 QECVELAKLLGIPVLKAKGEAEALCAQLNSEGHVDACITPDSDAFLFGAKCIIKSFSPNS 180

Query: 650 KEPFECYYMSDLEAGLGLKQVHLVAISLLVGNDHDLGGVSGIGIETALRFVRMFPEEEIL 829
           KEPFECY MSD+EAGLGLK+ HL+AISLLVGNDHDL GV GIGI++ALRFV+ F E++IL
Sbjct: 181 KEPFECYNMSDIEAGLGLKRKHLIAISLLVGNDHDLSGVQGIGIDSALRFVQAFGEDDIL 240

Query: 830 NRLHDIGNGDIPLFQIDSRSVGDCDLPNPNENS 928
           NRLH+IG G+     ID ++  + D+   + N+
Sbjct: 241 NRLHEIGKGNAFQVPIDIKAEENMDIDGNSPNT 273


>ref|XP_004144985.1| PREDICTED: flap endonuclease GEN-like 1-like [Cucumis sativus]
           gi|449472478|ref|XP_004153607.1| PREDICTED: flap
           endonuclease GEN-like 1-like [Cucumis sativus]
           gi|449516535|ref|XP_004165302.1| PREDICTED: flap
           endonuclease GEN-like 1-like [Cucumis sativus]
          Length = 606

 Score =  355 bits (910), Expect = 1e-95
 Identities = 169/250 (67%), Positives = 207/250 (82%), Gaps = 3/250 (1%)
 Frame = +2

Query: 119 MGVGGGFWEILKPYARNENFDFLQNKKVAVDLSYWIVQHETALKNKARNPHLRLTFFRTI 298
           MGVGG FW++LKP AR E FDFL+NK+VAVDLS+WIVQHETA+K+ AR+PHLRLTFFRTI
Sbjct: 1   MGVGGHFWDLLKPNARTEGFDFLRNKRVAVDLSFWIVQHETAIKSTARSPHLRLTFFRTI 60

Query: 299 NLFSKLGAFPVFVTDGTPSPLKARARMERFYRLTGLDVR---KVEDGVSVERNRAFQKCV 469
            LF+K GAFPVFV DGTPSPLK++AR+ RF RL+G+D     KVED +SV RNR F KCV
Sbjct: 61  TLFAKFGAFPVFVVDGTPSPLKSKARIARFSRLSGVDTSDLPKVEDRISVHRNRKFAKCV 120

Query: 470 RECVXXXXXXGIPVLKARCEAEELCAQLNSEGHVDACITADSDAFLYGAKCVIKCLRPSS 649
           +ECV      G+PVL+A+ EAE LCA+LN +G VDACITADSDAFL+GAKCVIK   P+S
Sbjct: 121 KECVELLELFGVPVLEAKGEAEALCAELNQKGFVDACITADSDAFLFGAKCVIKSFNPNS 180

Query: 650 KEPFECYYMSDLEAGLGLKQVHLVAISLLVGNDHDLGGVSGIGIETALRFVRMFPEEEIL 829
           KEP ECY+MSD+EA LG  + HL+AISLLVGNDHDL GV G+G++TA+ FV+ + ++EIL
Sbjct: 181 KEPLECYFMSDIEAALGFNRNHLIAISLLVGNDHDLNGVQGVGLDTAVCFVQDYTDDEIL 240

Query: 830 NRLHDIGNGD 859
           N+L++IGN D
Sbjct: 241 NKLYEIGNED 250


>ref|XP_002889348.1| hypothetical protein ARALYDRAFT_311256 [Arabidopsis lyrata subsp.
           lyrata] gi|297335190|gb|EFH65607.1| hypothetical protein
           ARALYDRAFT_311256 [Arabidopsis lyrata subsp. lyrata]
          Length = 590

 Score =  353 bits (905), Expect = 4e-95
 Identities = 173/263 (65%), Positives = 210/263 (79%), Gaps = 3/263 (1%)
 Frame = +2

Query: 119 MGVGGGFWEILKPYARNENFDFLQNKKVAVDLSYWIVQHETALKNKARNPHLRLTFFRTI 298
           MGVGG FW++L+PYA+   FD+L+NK+VAVDLS+WIVQHETA+K     PHLRLTFFRTI
Sbjct: 1   MGVGGNFWDLLRPYAQQRGFDYLRNKRVAVDLSFWIVQHETAVKGFVLKPHLRLTFFRTI 60

Query: 299 NLFSKLGAFPVFVTDGTPSPLKARARMERFYRLTGLDVRK---VEDGVSVERNRAFQKCV 469
           NLFSK GA+PVFV DGTPSPLK++AR+ RF+R +G+D      ++DGVSVERN+ F + V
Sbjct: 61  NLFSKFGAYPVFVVDGTPSPLKSQARISRFFRSSGIDTCNLPVIKDGVSVERNKLFCEWV 120

Query: 470 RECVXXXXXXGIPVLKARCEAEELCAQLNSEGHVDACITADSDAFLYGAKCVIKCLRPSS 649
           +ECV       IPVLKA  EAE LCAQLNSEG+VDACIT DSDAFL+GAKCVIK ++P+S
Sbjct: 121 KECVELLELLSIPVLKANGEAEALCAQLNSEGYVDACITPDSDAFLFGAKCVIKDIKPNS 180

Query: 650 KEPFECYYMSDLEAGLGLKQVHLVAISLLVGNDHDLGGVSGIGIETALRFVRMFPEEEIL 829
           +EPFECY+MSD+E+GLGLK+ HL+AISLLVGND+D GGV GIG++ ALR VR F E+EIL
Sbjct: 181 REPFECYHMSDIESGLGLKRKHLIAISLLVGNDYDSGGVLGIGVDKALRIVREFSEDEIL 240

Query: 830 NRLHDIGNGDIPLFQIDSRSVGD 898
            RL DIG G  P      +SV D
Sbjct: 241 ERLQDIGKGLKPTVPGGIKSVDD 263