BLASTX nr result

ID: Coptis25_contig00016040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016040
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABP98984.1| DMC1 [Hieracium caespitosum] gi|145952328|gb|ABP9...   137   7e-31
ref|XP_004134116.1| PREDICTED: meiotic recombination protein DMC...   136   2e-30
sp|P37384.1|DMC1_LILLO RecName: Full=Meiotic recombination prote...   136   2e-30
ref|NP_001238425.1| meiotic recombination protein DMC1 homolog [...   135   4e-30
gb|ADN85965.1| disrupted meiotic cDNA 1 protein [Leymus karelinii]    132   3e-29

>gb|ABP98984.1| DMC1 [Hieracium caespitosum] gi|145952328|gb|ABP98985.1| DMC1
           [Hieracium caespitosum]
          Length = 343

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/68 (94%), Positives = 68/68 (100%)
 Frame = +2

Query: 2   YMTNQVIADPGGGMFISDPKKPAGGHVLAHAATVRLMFRKGKGEQRVCKVFDSPNLPESE 181
           YMTNQVIADPGGG+FISDPKKPAGGHVLAHAATVRLMFRKGKGEQRVCKVFD+PNLPESE
Sbjct: 269 YMTNQVIADPGGGVFISDPKKPAGGHVLAHAATVRLMFRKGKGEQRVCKVFDAPNLPESE 328

Query: 182 AVFQITAG 205
           A+FQIT+G
Sbjct: 329 AIFQITSG 336


>ref|XP_004134116.1| PREDICTED: meiotic recombination protein DMC1 homolog [Cucumis
           sativus] gi|449504138|ref|XP_004162263.1| PREDICTED:
           meiotic recombination protein DMC1 homolog [Cucumis
           sativus]
          Length = 345

 Score =  136 bits (342), Expect = 2e-30
 Identities = 62/68 (91%), Positives = 67/68 (98%)
 Frame = +2

Query: 2   YMTNQVIADPGGGMFISDPKKPAGGHVLAHAATVRLMFRKGKGEQRVCKVFDSPNLPESE 181
           YMTNQV+ADPGGG+F+SDPKKPAGGHVLAHAATVRLMFRKGKGEQR+CKVFD+PNLPESE
Sbjct: 271 YMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLMFRKGKGEQRICKVFDAPNLPESE 330

Query: 182 AVFQITAG 205
           AVFQIT G
Sbjct: 331 AVFQITPG 338


>sp|P37384.1|DMC1_LILLO RecName: Full=Meiotic recombination protein DMC1 homolog
           gi|431168|dbj|BAA04845.1| RAD51-like protein [Lilium
           longiflorum]
          Length = 349

 Score =  136 bits (342), Expect = 2e-30
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +2

Query: 2   YMTNQVIADPGGGMFISDPKKPAGGHVLAHAATVRLMFRKGKGEQRVCKVFDSPNLPESE 181
           YMTNQVIADPGGGMFISDPKKPAGGHVLAHAATVRLM RKGKGEQRVCK+FD+PNLPESE
Sbjct: 275 YMTNQVIADPGGGMFISDPKKPAGGHVLAHAATVRLMLRKGKGEQRVCKIFDAPNLPESE 334

Query: 182 AVFQITAG 205
           AVFQIT G
Sbjct: 335 AVFQITPG 342


>ref|NP_001238425.1| meiotic recombination protein DMC1 homolog [Glycine max]
           gi|3219787|sp|Q96449.1|DMC1_SOYBN RecName: Full=Meiotic
           recombination protein DMC1 homolog
           gi|1518157|gb|AAB07025.1| RecA/Rad51/DMC1-like protein
           [Glycine max]
          Length = 345

 Score =  135 bits (339), Expect = 4e-30
 Identities = 61/68 (89%), Positives = 68/68 (100%)
 Frame = +2

Query: 2   YMTNQVIADPGGGMFISDPKKPAGGHVLAHAATVRLMFRKGKGEQRVCKVFDSPNLPESE 181
           YMTNQVI+DPGGG+F++DPKKPAGGHVLAHAATVRLMFRKGKGEQR+CKVFD+PNLPE+E
Sbjct: 271 YMTNQVISDPGGGVFVTDPKKPAGGHVLAHAATVRLMFRKGKGEQRICKVFDAPNLPEAE 330

Query: 182 AVFQITAG 205
           AVFQITAG
Sbjct: 331 AVFQITAG 338


>gb|ADN85965.1| disrupted meiotic cDNA 1 protein [Leymus karelinii]
          Length = 160

 Score =  132 bits (332), Expect = 3e-29
 Identities = 61/68 (89%), Positives = 65/68 (95%)
 Frame = +2

Query: 2   YMTNQVIADPGGGMFISDPKKPAGGHVLAHAATVRLMFRKGKGEQRVCKVFDSPNLPESE 181
           Y+TNQVIADPGGGMFI+DPKKPAGGHVLAHAATVRLM RKGKGEQRVCK+FD+PNLPE E
Sbjct: 92  YITNQVIADPGGGMFITDPKKPAGGHVLAHAATVRLMLRKGKGEQRVCKIFDAPNLPEGE 151

Query: 182 AVFQITAG 205
           AVFQIT G
Sbjct: 152 AVFQITTG 159


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