BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016033
         (1145 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23877.3| unnamed protein product [Vitis vinifera]              223   7e-56
ref|XP_002276553.1| PREDICTED: 50S ribosomal protein L18-like [V...   223   7e-56
ref|XP_004135173.1| PREDICTED: 50S ribosomal protein L18, chloro...   216   1e-53
gb|AFK37698.1| unknown [Lotus japonicus]                              211   3e-52
ref|XP_003613814.1| 50S ribosomal protein L18 [Medicago truncatu...   209   8e-52

>emb|CBI23877.3| unnamed protein product [Vitis vinifera]
          Length = 164

 Score =  223 bits (568), Expect = 7e-56
 Identities = 113/166 (68%), Positives = 134/166 (80%)
 Frame = +1

Query: 163 MALTTVPSLLHLKTSLLFQTHSNPFPFIPLPLSYTSLSYKPLVVVQARANTRKESAKVRN 342
           M   T P+L   K+S LF THSN   F+ +P++    S+   +V++ARAN +K+SAK+RN
Sbjct: 1   MTPVTAPTL-QFKSSGLFGTHSNSISFLSMPITN---SFTKAMVIEARANAKKDSAKIRN 56

Query: 343 RRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIRDNPSCSTIEAA 522
           RRL +KFNGS  +PRLSVFCS KQLYA LVDDQNK+CLFYGSTLQKSI  N  CS IEAA
Sbjct: 57  RRLQRKFNGSPTKPRLSVFCSAKQLYAMLVDDQNKRCLFYGSTLQKSIHGNNPCSAIEAA 116

Query: 523 QRVGEELVKACIDLKINEISSYDRNGFSRGEKMQAFEVAISRHGFL 660
           +RVGEELVKACID +INEISSYDRNGF+RGE+MQAFE+AISRHGFL
Sbjct: 117 ERVGEELVKACIDHQINEISSYDRNGFARGERMQAFEIAISRHGFL 162


>ref|XP_002276553.1| PREDICTED: 50S ribosomal protein L18-like [Vitis vinifera]
          Length = 177

 Score =  223 bits (568), Expect = 7e-56
 Identities = 113/166 (68%), Positives = 134/166 (80%)
 Frame = +1

Query: 163 MALTTVPSLLHLKTSLLFQTHSNPFPFIPLPLSYTSLSYKPLVVVQARANTRKESAKVRN 342
           M   T P+L   K+S LF THSN   F+ +P++    S+   +V++ARAN +K+SAK+RN
Sbjct: 14  MTPVTAPTL-QFKSSGLFGTHSNSISFLSMPITN---SFTKAMVIEARANAKKDSAKIRN 69

Query: 343 RRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIRDNPSCSTIEAA 522
           RRL +KFNGS  +PRLSVFCS KQLYA LVDDQNK+CLFYGSTLQKSI  N  CS IEAA
Sbjct: 70  RRLQRKFNGSPTKPRLSVFCSAKQLYAMLVDDQNKRCLFYGSTLQKSIHGNNPCSAIEAA 129

Query: 523 QRVGEELVKACIDLKINEISSYDRNGFSRGEKMQAFEVAISRHGFL 660
           +RVGEELVKACID +INEISSYDRNGF+RGE+MQAFE+AISRHGFL
Sbjct: 130 ERVGEELVKACIDHQINEISSYDRNGFARGERMQAFEIAISRHGFL 175


>ref|XP_004135173.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Cucumis
           sativus] gi|449478396|ref|XP_004155307.1| PREDICTED: 50S
           ribosomal protein L18, chloroplastic-like [Cucumis
           sativus]
          Length = 180

 Score =  216 bits (549), Expect = 1e-53
 Identities = 114/167 (68%), Positives = 131/167 (78%)
 Frame = +1

Query: 163 MALTTVPSLLHLKTSLLFQTHSNPFPFIPLPLSYTSLSYKPLVVVQARANTRKESAKVRN 342
           MA   V  LL LKTS+ F   S PF F  L   +  +  KPL + QAR N++ ESAKVRN
Sbjct: 18  MAFQNVSGLL-LKTSMPFGLQSKPFDFRSLKTKHCDV--KPLTI-QARGNSKTESAKVRN 73

Query: 343 RRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIRDNPSCSTIEAA 522
           RR+ KK+NG+  RPRLSVFCSDKQLYA LVDDQNKKCLFYGSTLQKS+R  PSC+TIEAA
Sbjct: 74  RRMQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPTPSCTTIEAA 133

Query: 523 QRVGEELVKACIDLKINEISSYDRNGFSRGEKMQAFEVAISRHGFLK 663
           Q VGEELVK C+DL I+EIS YDRNGF+ GEKMQAFE+AISR+GFL+
Sbjct: 134 QHVGEELVKVCMDLNIHEISLYDRNGFACGEKMQAFEIAISRYGFLQ 180


>gb|AFK37698.1| unknown [Lotus japonicus]
          Length = 164

 Score =  211 bits (537), Expect = 3e-52
 Identities = 112/167 (67%), Positives = 129/167 (77%)
 Frame = +1

Query: 163 MALTTVPSLLHLKTSLLFQTHSNPFPFIPLPLSYTSLSYKPLVVVQARANTRKESAKVRN 342
           MA    P+L H K+S +F    NP  FI        L  KPLVV +ARANTR ES K+RN
Sbjct: 1   MAQLNAPAL-HFKSSSVFGI--NPKSFIYFQGQSRCLIKKPLVV-EARANTRTESPKIRN 56

Query: 343 RRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIRDNPSCSTIEAA 522
           RR+ KKFNG++  PRLSVFCSDKQLYA LVDD+NKKCLFYGSTL KS R+NP CST+EAA
Sbjct: 57  RRMQKKFNGTARHPRLSVFCSDKQLYAMLVDDKNKKCLFYGSTLHKSFRENPPCSTVEAA 116

Query: 523 QRVGEELVKACIDLKINEISSYDRNGFSRGEKMQAFEVAISRHGFLK 663
           QRVGE LVKAC DLKINEISSYDRNGF RG+++ AFE+AIS +GFL+
Sbjct: 117 QRVGEALVKACTDLKINEISSYDRNGFGRGQRLDAFEIAISSYGFLQ 163


>ref|XP_003613814.1| 50S ribosomal protein L18 [Medicago truncatula]
           gi|355515149|gb|AES96772.1| 50S ribosomal protein L18
           [Medicago truncatula]
          Length = 189

 Score =  209 bits (533), Expect = 8e-52
 Identities = 105/143 (73%), Positives = 117/143 (81%)
 Frame = +1

Query: 232 PFPFIPLPLSYTSLSYKPLVVVQARANTRKESAKVRNRRLHKKFNGSSVRPRLSVFCSDK 411
           P PFI      TSL  K LV  +A+AN RKESAK+RNR++ KKFNG++  PRLSVFCSDK
Sbjct: 23  PKPFISFQPQTTSLIKKSLVT-KAKANARKESAKIRNRKMQKKFNGTATHPRLSVFCSDK 81

Query: 412 QLYATLVDDQNKKCLFYGSTLQKSIRDNPSCSTIEAAQRVGEELVKACIDLKINEISSYD 591
           QLYA LVDDQNKKCLFYGSTLQK  R+NP CSTIEAAQRVGE LVKAC+DL INEISSYD
Sbjct: 82  QLYAMLVDDQNKKCLFYGSTLQKLFRENPPCSTIEAAQRVGEALVKACVDLNINEISSYD 141

Query: 592 RNGFSRGEKMQAFEVAISRHGFL 660
           RNGF RGE++ AFE+AIS  GFL
Sbjct: 142 RNGFGRGERLNAFEIAISNFGFL 164