BLASTX nr result

ID: Coptis25_contig00016031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016031
         (1491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281292.2| PREDICTED: uncharacterized protein LOC100259...   603   e-170
ref|XP_002331736.1| predicted protein [Populus trichocarpa] gi|2...   592   e-167
ref|XP_002324974.1| predicted protein [Populus trichocarpa] gi|2...   590   e-166
ref|XP_002331740.1| predicted protein [Populus trichocarpa] gi|2...   589   e-166
ref|XP_003532491.1| PREDICTED: leucine-rich repeat extensin-like...   580   e-163

>ref|XP_002281292.2| PREDICTED: uncharacterized protein LOC100259389 [Vitis vinifera]
          Length = 752

 Score =  603 bits (1554), Expect = e-170
 Identities = 290/375 (77%), Positives = 325/375 (86%)
 Frame = +1

Query: 124  SSQETFISSTSDLTDAQVKYIRHRQLLYYRDEFGDRGENVSTDPSLVFENPRIKNAYIAL 303
            S+++  ISS   LTDA+V YI+ RQLLYYRDEFGDRGE+V+ DPSLVFENPR +NAYIAL
Sbjct: 26   SAEQISISSHGHLTDAEVMYIKRRQLLYYRDEFGDRGEDVTVDPSLVFENPRQRNAYIAL 85

Query: 304  QAWKQAIISDPLNQTGNWVGSDVCSYTGVFCTNATDDSTIQTVAGIDLNHGDIAGYLPEE 483
            QAWKQAI+SDPLN T NWVGS+VC+YTGV+C  A D+S+I+TVAGIDLNHGDIAGYLPEE
Sbjct: 86   QAWKQAILSDPLNLTLNWVGSNVCNYTGVYCAQAPDNSSIRTVAGIDLNHGDIAGYLPEE 145

Query: 484  LGLLVDLALFHINSNRFCGTVPHXXXXXXXXXXXDLSNNRFAGRFPGVVLQLPSLKFLDL 663
            LGLL DLALFHINSNRFCGTVPH           DLSNNRFAG+FP VVL LP+LKFLDL
Sbjct: 146  LGLLTDLALFHINSNRFCGTVPHKFAKLKILFELDLSNNRFAGKFPEVVLHLPTLKFLDL 205

Query: 664  RFNEFEGSVPSELFDKDLDAIFINNNQFAFDLPSNFGNSPVSVIVLANNKFHGCLPASLG 843
            RFNEFEG+VP ELFDKDLDAIFIN+N+FAFDLP NFGNSPVSVIV+ANNK HGC+PASLG
Sbjct: 206  RFNEFEGTVPKELFDKDLDAIFINHNRFAFDLPDNFGNSPVSVIVVANNKLHGCVPASLG 265

Query: 844  NMAGTLNEIILMNNGLRSCFPEEIGLLTNLTVLDVSFNQLMGPLPDTIGGMVSLEQLNVA 1023
            NMA TLNEIILMNN  RSC P EIGLL NLTVLDVS+N L+GPLP  IGGMV LEQLNVA
Sbjct: 266  NMADTLNEIILMNNQFRSCLPVEIGLLKNLTVLDVSYNGLLGPLPKEIGGMVELEQLNVA 325

Query: 1024 NNMLSGTIPSSICLLPNLQNFTYSYNFFTGEPPVCLRLSEFDDRKNCLPGRPAQRSAKQC 1203
            +NMLSG+IP+SIC LPNL+NFT+SYNFFTGEPP CL L++F+DR+NCLPGRP QRSA QC
Sbjct: 326  HNMLSGSIPASICKLPNLENFTFSYNFFTGEPPACLGLADFEDRRNCLPGRPEQRSAGQC 385

Query: 1204 KGFSSHPVDCNSFKC 1248
              F S PVDC+SF+C
Sbjct: 386  NSFLSRPVDCSSFRC 400


>ref|XP_002331736.1| predicted protein [Populus trichocarpa] gi|222874139|gb|EEF11270.1|
            predicted protein [Populus trichocarpa]
          Length = 420

 Score =  592 bits (1527), Expect = e-167
 Identities = 284/356 (79%), Positives = 311/356 (87%)
 Frame = +1

Query: 181  YIRHRQLLYYRDEFGDRGENVSTDPSLVFENPRIKNAYIALQAWKQAIISDPLNQTGNWV 360
            YI  RQLLYY+DEFGDRGE V+ DPSLVFENPR+KNAY+ALQAWKQAI SDPLN T NWV
Sbjct: 2    YIDKRQLLYYKDEFGDRGERVTVDPSLVFENPRLKNAYMALQAWKQAIFSDPLNLTANWV 61

Query: 361  GSDVCSYTGVFCTNATDDSTIQTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCG 540
            GS VC+Y GVFC+ A D+ TI+TVAGIDLNHGDIAGYLPEELG LVDLALFHINSNRFCG
Sbjct: 62   GSQVCNYEGVFCSRAPDNKTIRTVAGIDLNHGDIAGYLPEELGFLVDLALFHINSNRFCG 121

Query: 541  TVPHXXXXXXXXXXXDLSNNRFAGRFPGVVLQLPSLKFLDLRFNEFEGSVPSELFDKDLD 720
            T+PH           DLSNNRFAG+FP VVL+LPSLKFLDLRFNEFEG+VP ELFDKDLD
Sbjct: 122  TIPHKFKKLRLLFELDLSNNRFAGKFPQVVLKLPSLKFLDLRFNEFEGTVPKELFDKDLD 181

Query: 721  AIFINNNQFAFDLPSNFGNSPVSVIVLANNKFHGCLPASLGNMAGTLNEIILMNNGLRSC 900
            AIFIN+N+F FDLP NFGNSPVSVIVLANNKFHGC+P+SLGNM+  LNEIILMNNG RSC
Sbjct: 182  AIFINHNRFVFDLPVNFGNSPVSVIVLANNKFHGCVPSSLGNMS-NLNEIILMNNGFRSC 240

Query: 901  FPEEIGLLTNLTVLDVSFNQLMGPLPDTIGGMVSLEQLNVANNMLSGTIPSSICLLPNLQ 1080
             P EIGLL NLTV DVSFNQL+GPLPDT+GGMVSLEQLNVA+NMLSG IP+SIC LPNL+
Sbjct: 241  LPAEIGLLKNLTVFDVSFNQLIGPLPDTVGGMVSLEQLNVAHNMLSGKIPASICQLPNLE 300

Query: 1081 NFTYSYNFFTGEPPVCLRLSEFDDRKNCLPGRPAQRSAKQCKGFSSHPVDCNSFKC 1248
            NFT+SYNFFTGEPPVCL L +F DR+NCLPGRP QRSA QCK F S PVDC+SF+C
Sbjct: 301  NFTFSYNFFTGEPPVCLSLPDFSDRRNCLPGRPEQRSAAQCKAFLSMPVDCSSFRC 356


>ref|XP_002324974.1| predicted protein [Populus trichocarpa] gi|222866408|gb|EEF03539.1|
            predicted protein [Populus trichocarpa]
          Length = 509

 Score =  590 bits (1520), Expect = e-166
 Identities = 288/379 (75%), Positives = 316/379 (83%), Gaps = 2/379 (0%)
 Frame = +1

Query: 118  CISS--QETFISSTSDLTDAQVKYIRHRQLLYYRDEFGDRGENVSTDPSLVFENPRIKNA 291
            C+S+  Q   ISS   L+DA   YI+ RQLLYY+DEFGDRGE V+ DPSLVF NPR++NA
Sbjct: 24   CLSAAKQAPTISSYGGLSDADAMYIKKRQLLYYKDEFGDRGERVTVDPSLVFPNPRLRNA 83

Query: 292  YIALQAWKQAIISDPLNQTGNWVGSDVCSYTGVFCTNATDDSTIQTVAGIDLNHGDIAGY 471
            YIALQAWKQAI SDPLN T NWVGS VC+Y GVFC  A D+ TI+TVAGIDLNHGDIAGY
Sbjct: 84   YIALQAWKQAIFSDPLNLTANWVGSQVCNYEGVFCAPAPDNKTIRTVAGIDLNHGDIAGY 143

Query: 472  LPEELGLLVDLALFHINSNRFCGTVPHXXXXXXXXXXXDLSNNRFAGRFPGVVLQLPSLK 651
            LPEELGLLVD+ALFHINSNRFCGTVP            DLSNNRFAG+FP VVL+LPSLK
Sbjct: 144  LPEELGLLVDIALFHINSNRFCGTVPRKFKDMRLLFELDLSNNRFAGKFPQVVLKLPSLK 203

Query: 652  FLDLRFNEFEGSVPSELFDKDLDAIFINNNQFAFDLPSNFGNSPVSVIVLANNKFHGCLP 831
            FLDLRFNEFEG+VP ELFDKDLDAIFIN+N+F FDLP N GNSPVSVIVLANNKFHGC+P
Sbjct: 204  FLDLRFNEFEGTVPKELFDKDLDAIFINHNRFVFDLPENLGNSPVSVIVLANNKFHGCVP 263

Query: 832  ASLGNMAGTLNEIILMNNGLRSCFPEEIGLLTNLTVLDVSFNQLMGPLPDTIGGMVSLEQ 1011
            +SLGNM+  LNEIILMNNG RSC P EIGLL +LTVLDVSFNQLMGPLPD  GGM SLEQ
Sbjct: 264  SSLGNMS-NLNEIILMNNGFRSCMPAEIGLLKDLTVLDVSFNQLMGPLPDAFGGMASLEQ 322

Query: 1012 LNVANNMLSGTIPSSICLLPNLQNFTYSYNFFTGEPPVCLRLSEFDDRKNCLPGRPAQRS 1191
            LNVA+NMLSG IP+SIC LPNL NFT+SYNFFTGEPPVCL L +F DR+NCLP RP QRS
Sbjct: 323  LNVAHNMLSGKIPASICKLPNLDNFTFSYNFFTGEPPVCLSLPDFSDRRNCLPARPLQRS 382

Query: 1192 AKQCKGFSSHPVDCNSFKC 1248
            A QC  F S PVDC+SF+C
Sbjct: 383  AAQCNAFLSRPVDCSSFRC 401


>ref|XP_002331740.1| predicted protein [Populus trichocarpa] gi|222874266|gb|EEF11397.1|
            predicted protein [Populus trichocarpa]
          Length = 415

 Score =  589 bits (1519), Expect = e-166
 Identities = 282/352 (80%), Positives = 309/352 (87%)
 Frame = +1

Query: 193  RQLLYYRDEFGDRGENVSTDPSLVFENPRIKNAYIALQAWKQAIISDPLNQTGNWVGSDV 372
            RQLLYY+DEFGDRGE V+ DPSLVFENPR+KNAY+ALQAWKQAI SDPLN T NWVGS V
Sbjct: 1    RQLLYYKDEFGDRGERVTVDPSLVFENPRLKNAYMALQAWKQAIFSDPLNLTANWVGSQV 60

Query: 373  CSYTGVFCTNATDDSTIQTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPH 552
            C+Y GVFC+ A D+ TI+TVAGIDLNHGDIAGYLPEELG LVDLALFHINSNRFCGT+PH
Sbjct: 61   CNYEGVFCSRAPDNKTIRTVAGIDLNHGDIAGYLPEELGFLVDLALFHINSNRFCGTIPH 120

Query: 553  XXXXXXXXXXXDLSNNRFAGRFPGVVLQLPSLKFLDLRFNEFEGSVPSELFDKDLDAIFI 732
                       DLSNNRFAG+FP VVL+LPSLKFLDLRFNEFEG+VP ELFDKDLDAIFI
Sbjct: 121  KFKKLRLLFELDLSNNRFAGKFPQVVLKLPSLKFLDLRFNEFEGTVPKELFDKDLDAIFI 180

Query: 733  NNNQFAFDLPSNFGNSPVSVIVLANNKFHGCLPASLGNMAGTLNEIILMNNGLRSCFPEE 912
            N+N+F FDLP NFGNSPVSVIVLANNKFHGC+P+SLGNM+  LNEIILMNNG RSC P E
Sbjct: 181  NHNRFVFDLPVNFGNSPVSVIVLANNKFHGCVPSSLGNMS-NLNEIILMNNGFRSCLPAE 239

Query: 913  IGLLTNLTVLDVSFNQLMGPLPDTIGGMVSLEQLNVANNMLSGTIPSSICLLPNLQNFTY 1092
            IGLL NLTV DVSFNQL+GPLPDT+GGMVSLEQLNVA+NMLSG IP+SIC LPNL+NFT+
Sbjct: 240  IGLLKNLTVFDVSFNQLIGPLPDTVGGMVSLEQLNVAHNMLSGKIPASICQLPNLENFTF 299

Query: 1093 SYNFFTGEPPVCLRLSEFDDRKNCLPGRPAQRSAKQCKGFSSHPVDCNSFKC 1248
            SYNFFTGEPPVCL L +F DR+NCLPGRP QRSA QCK F S PVDC+SF+C
Sbjct: 300  SYNFFTGEPPVCLSLPDFSDRRNCLPGRPEQRSAAQCKAFLSMPVDCSSFRC 351


>ref|XP_003532491.1| PREDICTED: leucine-rich repeat extensin-like protein 4-like [Glycine
            max]
          Length = 735

 Score =  580 bits (1496), Expect = e-163
 Identities = 279/367 (76%), Positives = 308/367 (83%)
 Frame = +1

Query: 148  STSDLTDAQVKYIRHRQLLYYRDEFGDRGENVSTDPSLVFENPRIKNAYIALQAWKQAII 327
            S S L+DA+  Y++ RQLLYYRDEFGDRGENV  DPSL FEN R++NAYIALQAWKQAI+
Sbjct: 30   SASSLSDAEAMYVKQRQLLYYRDEFGDRGENVIVDPSLAFENDRLRNAYIALQAWKQAIL 89

Query: 328  SDPLNQTGNWVGSDVCSYTGVFCTNATDDSTIQTVAGIDLNHGDIAGYLPEELGLLVDLA 507
            SDP NQT +WVGSDVCSYTGV+C  A D   I+TVAGIDLNH DIAGYLPEELGLL+DLA
Sbjct: 90   SDPRNQTADWVGSDVCSYTGVYCAPALDIPKIRTVAGIDLNHCDIAGYLPEELGLLLDLA 149

Query: 508  LFHINSNRFCGTVPHXXXXXXXXXXXDLSNNRFAGRFPGVVLQLPSLKFLDLRFNEFEGS 687
            LFH+NSNRFCGTVPH           DLSNNRFAG FP VVL+LPSLKFLDLRFNEFEG+
Sbjct: 150  LFHVNSNRFCGTVPHKFERLKLLYELDLSNNRFAGNFPEVVLRLPSLKFLDLRFNEFEGT 209

Query: 688  VPSELFDKDLDAIFINNNQFAFDLPSNFGNSPVSVIVLANNKFHGCLPASLGNMAGTLNE 867
            VP ELFDKDLDAIFIN+N+F FDLP NFGNSPVSVIVLANN+FHGC+PASLGNM+  LNE
Sbjct: 210  VPRELFDKDLDAIFINDNRFVFDLPDNFGNSPVSVIVLANNRFHGCIPASLGNMS-NLNE 268

Query: 868  IILMNNGLRSCFPEEIGLLTNLTVLDVSFNQLMGPLPDTIGGMVSLEQLNVANNMLSGTI 1047
            IILMNN  RSC P EIGLL NLTV DVSFNQL+GP+P+ +G  VSLEQLNVA+N+LSG I
Sbjct: 269  IILMNNAFRSCLPSEIGLLKNLTVFDVSFNQLLGPIPNAVGNAVSLEQLNVAHNLLSGQI 328

Query: 1048 PSSICLLPNLQNFTYSYNFFTGEPPVCLRLSEFDDRKNCLPGRPAQRSAKQCKGFSSHPV 1227
            P+SIC+LP+LQNFTYS+NFFTGEPP CL L  FDDR NCLP RP QR   QCK F S PV
Sbjct: 329  PASICMLPHLQNFTYSFNFFTGEPPACLALPAFDDRVNCLPARPLQRPPAQCKSFLSKPV 388

Query: 1228 DCNSFKC 1248
            DCNSFKC
Sbjct: 389  DCNSFKC 395


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