BLASTX nr result

ID: Coptis25_contig00016025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016025
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526937.1| hypothetical protein RCOM_0530880 [Ricinus c...    70   2e-10
ref|XP_003571445.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    63   3e-08
ref|XP_002271204.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    62   6e-08
gb|EEE68111.1| hypothetical protein OsJ_26174 [Oryza sativa Japo...    61   8e-08
gb|EEC82956.1| hypothetical protein OsI_27949 [Oryza sativa Indi...    61   8e-08

>ref|XP_002526937.1| hypothetical protein RCOM_0530880 [Ricinus communis]
           gi|223533689|gb|EEF35424.1| hypothetical protein
           RCOM_0530880 [Ricinus communis]
          Length = 367

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
 Frame = -3

Query: 329 QKMRVGCNAKMDVKRSSDGKWIVQKFVEEHNHECVSLGETHLLRSHRGRQVTXXXXXXXX 150
           Q+ R GC A+M + R  +GK+ V +FV +HNHE ++    H+L S +             
Sbjct: 166 QETRTGCLAQMTIARQPNGKFRVTRFVTQHNHEFLAPSTAHMLPSQK-------RLTFAQ 218

Query: 149 XXELDLA-DELSNRKPSVGMEFESHHKAFLYYNAYARVLGFVVRKD 15
             E DLA D + +  P +GM FES   A+ +YNAYA  +GF VRKD
Sbjct: 219 AVEADLAKDFVMDGVPKLGMGFESEDHAYEFYNAYAGQVGFSVRKD 264


>ref|XP_003571445.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Brachypodium
           distachyon]
          Length = 854

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 38/119 (31%), Positives = 54/119 (45%)
 Frame = -3

Query: 359 IEMKRRAEVLQKMRVGCNAKMDVKRSSDGKWIVQKFVEEHNHECVSLGETHLLRSHRGRQ 180
           +E K+  +    +R GCNA ++V R  D KW+V K V+EHNHE       H + +     
Sbjct: 143 VEGKKTRKRPASIREGCNAMLEVLRRGDNKWVVTKLVKEHNHEVGMPSTVHYIATESDTV 202

Query: 179 VTXXXXXXXXXXELDLADELSNRKPSVGMEFESHHKAFLYYNAYARVLGFVVRKDKTRK 3
           V                       P +GMEFES   A  +Y +YA  +GF  R  ++RK
Sbjct: 203 V----------------------DPYIGMEFESLESAKTFYYSYAIRVGFEARVRQSRK 239


>ref|XP_002271204.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 885

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/105 (35%), Positives = 54/105 (51%)
 Frame = -3

Query: 329 QKMRVGCNAKMDVKRSSDGKWIVQKFVEEHNHECVSLGETHLLRSHRGRQVTXXXXXXXX 150
           Q+ R GC A M + R  +G + V  F   HNHE V+    ++L SH  +++T        
Sbjct: 209 QETRTGCLAHMTIARQPNGNFRVTHFETRHNHELVTPTTAYMLPSH--KRLTFAQAVEAN 266

Query: 149 XXELDLADELSNRKPSVGMEFESHHKAFLYYNAYARVLGFVVRKD 15
                + D +    P +GM F+S   A+ +YNAYA  +GF VRKD
Sbjct: 267 SANSSVTDGV----PRLGMGFDSEDLAYEFYNAYAGRVGFSVRKD 307


>gb|EEE68111.1| hypothetical protein OsJ_26174 [Oryza sativa Japonica Group]
          Length = 1058

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/107 (34%), Positives = 48/107 (44%)
 Frame = -3

Query: 323 MRVGCNAKMDVKRSSDGKWIVQKFVEEHNHECVSLGETHLLRSHRGRQVTXXXXXXXXXX 144
           +R GCNA ++V R  D KWIV K V+EHNHE       H +       V           
Sbjct: 160 IREGCNAMLEVLRRGDSKWIVTKLVKEHNHEVGMPSRVHYIAMEGDTVV----------- 208

Query: 143 ELDLADELSNRKPSVGMEFESHHKAFLYYNAYARVLGFVVRKDKTRK 3
                       P +GMEFES   A  +Y +YA  +GF  R  ++RK
Sbjct: 209 -----------DPYIGMEFESLEAAKTFYYSYATRVGFEARVRQSRK 244


>gb|EEC82956.1| hypothetical protein OsI_27949 [Oryza sativa Indica Group]
          Length = 980

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/107 (34%), Positives = 48/107 (44%)
 Frame = -3

Query: 323 MRVGCNAKMDVKRSSDGKWIVQKFVEEHNHECVSLGETHLLRSHRGRQVTXXXXXXXXXX 144
           +R GCNA ++V R  D KWIV K V+EHNHE       H +       V           
Sbjct: 160 IREGCNAMLEVLRRGDSKWIVTKLVKEHNHEVGMPSRVHYIAMEGDTVV----------- 208

Query: 143 ELDLADELSNRKPSVGMEFESHHKAFLYYNAYARVLGFVVRKDKTRK 3
                       P +GMEFES   A  +Y +YA  +GF  R  ++RK
Sbjct: 209 -----------DPYIGMEFESLEAAKTFYYSYATRVGFEARVRQSRK 244


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