BLASTX nr result

ID: Coptis25_contig00016019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016019
         (2293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314123.1| predicted protein [Populus trichocarpa] gi|2...   362   2e-97
ref|XP_002280403.1| PREDICTED: uncharacterized protein LOC100244...   362   2e-97
ref|XP_002525595.1| DNA binding protein, putative [Ricinus commu...   361   5e-97
ref|XP_002299827.1| predicted protein [Populus trichocarpa] gi|2...   353   1e-94
gb|AFH03060.1| R2R3-MYB transcription factor MYB8 [Epimedium sag...   351   4e-94

>ref|XP_002314123.1| predicted protein [Populus trichocarpa] gi|222850531|gb|EEE88078.1|
            predicted protein [Populus trichocarpa]
          Length = 308

 Score =  362 bits (929), Expect = 2e-97
 Identities = 191/309 (61%), Positives = 218/309 (70%), Gaps = 7/309 (2%)
 Frame = -1

Query: 1618 MKWGMEILSP-----YSNWLLGGTKITKWTQQENKLFENALAIYDKETPDRWQKVADMIP 1454
            MKW  EILSP      SNWL   +K TKWT  ENK FENALAIYDKET DRW KVA MIP
Sbjct: 1    MKWETEILSPGSYLSSSNWLAEESKNTKWTIAENKAFENALAIYDKETSDRWHKVAAMIP 60

Query: 1453 GKSVNDVFNQYKELENDVSDIEAGLIPIPGYTTSSFSFEWMNENG-DFDGLKQSYGAGVK 1277
            GK+V DV  QYKELE DVS IEAGLIP+PGY++S F+ +W+N NG  +DG KQSYG G K
Sbjct: 61   GKTVEDVIKQYKELELDVSYIEAGLIPVPGYSSSPFTLDWVNGNGYGYDGFKQSYGLGGK 120

Query: 1276 RTSSTRPSDHERKKGVPWTEEEHXXXXXXXXXXXXGDWRNISRNFVITRTPTQVASHAQK 1097
            R+S+ RP+D ERKKGVPWTEEEH            GDWRNISRNFVI+RTPTQVASHAQK
Sbjct: 121  RSSTGRPTDQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVISRTPTQVASHAQK 180

Query: 1096 YFIRQHSGGKDKRRSSIHDITTVNCLE-NAPSPDNNKPRSPDQSTMPSQQPKESHAAKPQ 920
            YFIRQ SGGKDKRR+SIHDITTVN  E   PSPD NK  SPDQS   SQQP  +   +  
Sbjct: 181  YFIRQLSGGKDKRRASIHDITTVNLNETRTPSPD-NKRTSPDQSGAISQQPNSAAMPRTH 239

Query: 919  FGWNHPHNRANMTFNSNHGNMFMVPPYAITSNEMKLMGQNFSRGTLHGSQVIPQRTVVQL 740
            F WN P++ A M FNS + NMFM  PY I S  +K+ GQN  RG +H S +  Q    Q+
Sbjct: 240  FQWNQPNSGATMAFNSTNANMFMSSPYGINSYGLKMQGQNPHRGAVHDSYIGQQTMGFQM 299

Query: 739  HSSQCHPNG 713
             S+Q +P+G
Sbjct: 300  QSAQHYPHG 308


>ref|XP_002280403.1| PREDICTED: uncharacterized protein LOC100244960 [Vitis vinifera]
            gi|147844863|emb|CAN81229.1| hypothetical protein
            VITISV_033664 [Vitis vinifera]
          Length = 307

 Score =  362 bits (929), Expect = 2e-97
 Identities = 183/308 (59%), Positives = 218/308 (70%), Gaps = 6/308 (1%)
 Frame = -1

Query: 1618 MKWGMEILSPYS-----NWLLGGTKITKWTQQENKLFENALAIYDKETPDRWQKVADMIP 1454
            MKW MEILSP S     N LL  +K ++WT +ENK FENALA+YD++TPDRWQKVA MIP
Sbjct: 1    MKWEMEILSPASYLSNSNCLLEESKSSRWTPEENKTFENALAVYDRDTPDRWQKVAAMIP 60

Query: 1453 GKSVNDVFNQYKELENDVSDIEAGLIPIPGYTTSSFSFEWMNENGDFDGLKQSYGAGVKR 1274
            GK+V DVF QYKELE DV  IEAGL+PIPGY+TS F+ EW   +G ++GLKQ YG G KR
Sbjct: 61   GKTVGDVFKQYKELELDVGKIEAGLVPIPGYSTSPFTLEWTTNHG-YEGLKQPYGLGGKR 119

Query: 1273 TSSTRPSDHERKKGVPWTEEEHXXXXXXXXXXXXGDWRNISRNFVITRTPTQVASHAQKY 1094
             SSTRP+D ERKKGVPWTEEEH            GDWRNISRNFV+TRTPTQVASHAQKY
Sbjct: 120  PSSTRPTDQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 179

Query: 1093 FIRQHSGGKDKRRSSIHDITTVNCLE-NAPSPDNNKPRSPDQSTMPSQQPKESHAAKPQF 917
            FIRQ SGGKDKRR+SIHDITTVN  +   PSP+N +P SPDQS    +QP  +   +  F
Sbjct: 180  FIRQLSGGKDKRRASIHDITTVNLTDTRTPSPENKRPPSPDQSIGVPKQPNSAPMNRTTF 239

Query: 916  GWNHPHNRANMTFNSNHGNMFMVPPYAITSNEMKLMGQNFSRGTLHGSQVIPQRTVVQLH 737
             W+ P++ A M FN  HGN+FM  PY + S  +K+ GQN  R   + S + PQ  V Q+ 
Sbjct: 240  QWSQPNSGAPMAFNPTHGNIFMSSPYGMNSYGLKMQGQNLHRAAFNESYIGPQSMVFQMQ 299

Query: 736  SSQCHPNG 713
            S+   P+G
Sbjct: 300  STPHFPHG 307


>ref|XP_002525595.1| DNA binding protein, putative [Ricinus communis]
            gi|223535031|gb|EEF36713.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 307

 Score =  361 bits (926), Expect = 5e-97
 Identities = 182/308 (59%), Positives = 218/308 (70%), Gaps = 6/308 (1%)
 Frame = -1

Query: 1618 MKWGMEILSPYS-----NWLLGGTKITKWTQQENKLFENALAIYDKETPDRWQKVADMIP 1454
            MKW + +LSP S     NWL+  +K TKWT  ENK+FENALA+YDK+TPDRW KVA MIP
Sbjct: 1    MKWDIGVLSPTSYLSSTNWLIEESKNTKWTPAENKMFENALAVYDKDTPDRWHKVAAMIP 60

Query: 1453 GKSVNDVFNQYKELENDVSDIEAGLIPIPGYTTSSFSFEWMNENGDFDGLKQSYGAGVKR 1274
            GK+V DV  QY+ELE DV++IEAGL+PIPGY TS+F+ +W+N N  +DG K SY  G KR
Sbjct: 61   GKTVGDVIKQYRELEVDVNNIEAGLVPIPGYNTSAFTLDWVNSNS-YDGFKPSYAFGGKR 119

Query: 1273 TSSTRPSDHERKKGVPWTEEEHXXXXXXXXXXXXGDWRNISRNFVITRTPTQVASHAQKY 1094
            +SS RP+D ERKKGVPWTEEEH            GDWRNISRNFV+TRTPTQVASHAQKY
Sbjct: 120  SSSGRPADQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 179

Query: 1093 FIRQHSGGKDKRRSSIHDITTVNCLE-NAPSPDNNKPRSPDQSTMPSQQPKESHAAKPQF 917
            FIRQ SGGKDKRR+SIHDITTVN  E   PSP+N +  SPDQS++ SQQ       +  F
Sbjct: 180  FIRQLSGGKDKRRASIHDITTVNLNEIRTPSPENKRQASPDQSSVFSQQSNGVSLPRTHF 239

Query: 916  GWNHPHNRANMTFNSNHGNMFMVPPYAITSNEMKLMGQNFSRGTLHGSQVIPQRTVVQLH 737
             WN P++ A M FNS +GNMF    Y + S  MKL G N   G+LH S + PQ    Q+ 
Sbjct: 240  QWNQPNSGAIMAFNSTNGNMFTSSTYGVNSYGMKLQGYNLHSGSLHESYIGPQTIAFQMQ 299

Query: 736  SSQCHPNG 713
            S+Q +P+G
Sbjct: 300  SAQHYPDG 307


>ref|XP_002299827.1| predicted protein [Populus trichocarpa] gi|222847085|gb|EEE84632.1|
            predicted protein [Populus trichocarpa]
          Length = 302

 Score =  353 bits (905), Expect = 1e-94
 Identities = 181/304 (59%), Positives = 215/304 (70%), Gaps = 6/304 (1%)
 Frame = -1

Query: 1606 MEILSPYS-----NWLLGGTKITKWTQQENKLFENALAIYDKETPDRWQKVADMIPGKSV 1442
            M ILSP S     NWLL  +K TKWT  ENK FENALA+YD++TPDRW KVA MIPGK+V
Sbjct: 1    MGILSPASYLSSTNWLLEESKNTKWTPAENKAFENALAVYDEDTPDRWHKVAAMIPGKTV 60

Query: 1441 NDVFNQYKELENDVSDIEAGLIPIPGYTTSSFSFEWMNENGDFDGLKQSYGAGVKRTSST 1262
             DV  QYKELE DVS IEAGLIP+PGY+TS F+ +W++ NG +DG KQSYG G KR+S+ 
Sbjct: 61   GDVIKQYKELELDVSYIEAGLIPVPGYSTSPFTLDWVDGNG-YDGFKQSYGLGGKRSSTG 119

Query: 1261 RPSDHERKKGVPWTEEEHXXXXXXXXXXXXGDWRNISRNFVITRTPTQVASHAQKYFIRQ 1082
            RP+D ERKKGVPWTEEEH            GDWRNISRNFV++RTPTQVASHAQKYFIRQ
Sbjct: 120  RPADQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVVSRTPTQVASHAQKYFIRQ 179

Query: 1081 HSGGKDKRRSSIHDITTVNCLE-NAPSPDNNKPRSPDQSTMPSQQPKESHAAKPQFGWNH 905
             SGGKDKRR+SIHDITTVN  +   PSPDN +P SPDQ    SQQP  +   +  F WN 
Sbjct: 180  LSGGKDKRRASIHDITTVNLNDARTPSPDNKRP-SPDQPGAISQQPNSAAMPRTHFQWNQ 238

Query: 904  PHNRANMTFNSNHGNMFMVPPYAITSNEMKLMGQNFSRGTLHGSQVIPQRTVVQLHSSQC 725
            P+    + FNS + NMFM  PY I+S  +K+ GQN  RG +H S +  Q    Q+ S+  
Sbjct: 239  PNGGGTLAFNSTNANMFMSAPYGISSYGLKMQGQNLPRGAVHDSYIRQQTMGFQMPSAHH 298

Query: 724  HPNG 713
            +P+G
Sbjct: 299  YPHG 302


>gb|AFH03060.1| R2R3-MYB transcription factor MYB8 [Epimedium sagittatum]
          Length = 298

 Score =  351 bits (901), Expect = 4e-94
 Identities = 187/304 (61%), Positives = 212/304 (69%), Gaps = 6/304 (1%)
 Frame = -1

Query: 1606 MEILSPYS-----NWLLGGTKITKWTQQENKLFENALAIYDKETPDRWQKVADMIPGKSV 1442
            MEI SP +     NWLL  +K  KWT +ENKLFE ALAI DKETPDRWQKVA+MIPGK+V
Sbjct: 1    MEIQSPRTYHSNTNWLLEQSKTAKWTHEENKLFETALAICDKETPDRWQKVAEMIPGKTV 60

Query: 1441 NDVFNQYKELENDVSDIEAGLIPIPGYTTSSFSFEWMNENGDFDGLKQSYGAGVKRTSST 1262
            +DV  QYKELE+DVSDIEAGL+PIPGYTTS F+ +WMN N  F    QS+ A  KR+SS 
Sbjct: 61   SDVIKQYKELEDDVSDIEAGLVPIPGYTTS-FTLDWMN-NQTFG---QSFDANGKRSSSG 115

Query: 1261 RPSDHERKKGVPWTEEEHXXXXXXXXXXXXGDWRNISRNFVITRTPTQVASHAQKYFIRQ 1082
            RP++ ERKKGVPWTE+EH            GDWRNISRNFVITRTPTQVASHAQKYFIRQ
Sbjct: 116  RPTEQERKKGVPWTEDEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQ 175

Query: 1081 HSGGKDKRRSSIHDITTVNCLENAPSPDNNKPRSPDQSTMPSQQPKESHAAKPQFGWNHP 902
             SGGKDKRRSSIHDITTVN  +  P   ++   S +QS M  Q    S   KP FGWN P
Sbjct: 176  LSGGKDKRRSSIHDITTVNLNDTRPPSPDSSRSSLEQSAMLQQSSNHSSTNKPMFGWNQP 235

Query: 901  HN-RANMTFNSNHGNMFMVPPYAITSNEMKLMGQNFSRGTLHGSQVIPQRTVVQLHSSQC 725
            H+    M FN  + NMF VPPY   S   K+ GQN  RG  HGS + P  TV Q+ SSQC
Sbjct: 236  HDGTPTMVFNHTNMNMF-VPPYGANSYGTKMQGQNLHRGGFHGSHIGPHGTVFQMQSSQC 294

Query: 724  HPNG 713
            HP+G
Sbjct: 295  HPHG 298


Top