BLASTX nr result
ID: Coptis25_contig00016003
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00016003 (1649 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g... 103 1e-38 ref|XP_002532715.1| conserved hypothetical protein [Ricinus comm... 93 8e-33 ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ... 94 1e-32 ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus ... 79 1e-30 ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin... 80 2e-28 >ref|XP_002308787.1| f-box family protein [Populus trichocarpa] gi|222854763|gb|EEE92310.1| f-box family protein [Populus trichocarpa] Length = 396 Score = 103 bits (256), Expect(3) = 1e-38 Identities = 73/217 (33%), Positives = 110/217 (50%), Gaps = 9/217 (4%) Frame = +2 Query: 875 EDYEVVEIRFLA-----RFPSEVCVYSLRRNSWRKIQDIPYSIPYITTTGAFTNDALHWT 1039 +DY++V I F SEV VYSLR+ SWR+I D+PY + Y G F N ALHW Sbjct: 158 DDYKLVRIAQFGGGGKRSFESEVKVYSLRKQSWRRIGDMPYCVHYPGANGVFANGALHWV 217 Query: 1040 A--FPLRSFNAVIIAYDVGGDSFREVPYPDHLISYSCKIDAAILDDNLCMMWCDKGP-YE 1210 P + +++A D+G + +REV P++ + ID +L LC + G + Sbjct: 218 VGENPESNVANIVVALDLGVEDYREVLQPEYK-DKNFYIDLGVLRGCLCFLANFLGERVD 276 Query: 1211 LWMMEEYGAIESWTKKFIIRLDLELQYTSPGLVPLCFIKDGATLVLD-SIYDLRLFELGS 1387 +WMM+EYG ESWTK F + E+ L PL + K G ++++ DL ++ Sbjct: 277 VWMMKEYGVKESWTKLFSV-AQYEVIGFLRSLKPLAYSKSGDEVLIEHDNLDLCWYD--- 332 Query: 1388 KILKRWPVSTKDGFKSCCFEATIYTESLVTIE*GLHM 1498 LKR V + FEA + ESL+++ H+ Sbjct: 333 --LKRKQVKNRIPGIPYSFEADTFVESLISVSPNRHL 367 Score = 53.9 bits (128), Expect(3) = 1e-38 Identities = 25/52 (48%), Positives = 33/52 (63%) Frame = +1 Query: 430 LPHEIIELILLRLPVKSILRFRCVSKSWCSLLDDPNFVDRHFRKQLEDKNQL 585 LP E+I IL RLP K +L R VSK WC+L+D PNFV H + ++ + L Sbjct: 4 LPLEMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDTSSNL 55 Score = 51.6 bits (122), Expect(3) = 1e-38 Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 5/93 (5%) Frame = +3 Query: 594 SHICLSKYKLKLIRFGNISF*IDDDPLKTGFFGIKIWGSSNGLVCMTAKQNTIMCLWNPS 773 SH+ ++ L+ ++ + PL GIK+ GS NGL+C++ + I +WNPS Sbjct: 63 SHVHYMDFEQNLVLNDCVTLKELNHPLMCYNHGIKVLGSVNGLLCISNVVDDI-AVWNPS 121 Query: 774 TRKHKILPTNTLNHINYVQRK-----VYGFGYN 857 TRKH+++P + Y K V+GFGY+ Sbjct: 122 TRKHRVVPFLPIELKRYFGTKSCSVYVFGFGYD 154 >ref|XP_002532715.1| conserved hypothetical protein [Ricinus communis] gi|223527542|gb|EEF29664.1| conserved hypothetical protein [Ricinus communis] Length = 395 Score = 92.8 bits (229), Expect(3) = 8e-33 Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 16/205 (7%) Frame = +2 Query: 923 EVCVYSLRRNSWRKIQDIPYSIPYITTT----------GAFTNDALHWTA--FPLRSFNA 1066 +V VYSL+ +SW++I+ +PY + ++ G F +ALHW +P N Sbjct: 178 QVQVYSLKNDSWKRIKGLPYYLRFLYKPFFQVLHRRGYGVFACNALHWVMPHWPELGVNN 237 Query: 1067 VIIAYDVGGDSFREVPYP---DHLISYSCKIDAAILDDNLCMMW-CDKGPYELWMMEEYG 1234 IIA+D+ ++F++VP P D+ +++ ++DA +L+ LC M C +LW+MEEYG Sbjct: 238 SIIAFDIVNETFQQVPQPNWSDNQLNF--QVDAGVLEGRLCAMCNCGHECIDLWVMEEYG 295 Query: 1235 AIESWTKKFIIRLDLELQYTSPGLVPLCFIKDGATLVLDSIYDLRLFELGSKILKRWPVS 1414 ESW K F RL + L PLC+ KD ++L+ + D +L V Sbjct: 296 VKESWIKLFSFRLSKSMS-NLMFLRPLCYSKDREKMLLE-VNDHKLVWYDWNKTSVRTVK 353 Query: 1415 TKDGFKSCCFEATIYTESLVTIE*G 1489 K G +S F A + SLV ++ G Sbjct: 354 VKGGPRS--FGAAMCVGSLVPLDDG 376 Score = 62.4 bits (150), Expect(3) = 8e-33 Identities = 29/75 (38%), Positives = 48/75 (64%) Frame = +1 Query: 430 LPHEIIELILLRLPVKSILRFRCVSKSWCSLLDDPNFVDRHFRKQLEDKNQLDKKAIFVY 609 +P +I+ +LL LPVK++LRFRC+SK CSL+D P+F+D H L+ ++ L + Sbjct: 4 IPDDIVSDVLLLLPVKALLRFRCLSKPLCSLIDSPDFIDHHLSHSLKTRSNL----FLIL 59 Query: 610 PNTSLNSLDLETFHS 654 + +L +LD ++ S Sbjct: 60 RDWNLYTLDFDSLSS 74 Score = 33.9 bits (76), Expect(3) = 8e-33 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 6/69 (8%) Frame = +3 Query: 669 PLKTGFFGIKIWGSSNGLVCMTAKQNTIMCLWNPSTRKHKILPTNTL------NHINYVQ 830 PL+ G G + GS NGL+ + + + L+NP+TRK+K +P + + + YV Sbjct: 86 PLQKGG-GTEAVGSCNGLLALRNSERDL-ALYNPATRKYKRVPVSEIEPPDRNSKTGYV- 142 Query: 831 RKVYGFGYN 857 YGFG++ Sbjct: 143 --FYGFGFD 149 >ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 389 Score = 94.0 bits (232), Expect(3) = 1e-32 Identities = 68/216 (31%), Positives = 111/216 (51%), Gaps = 14/216 (6%) Frame = +2 Query: 875 EDYEVVEIRFLA-----RFPSEVCVYSLRRNSWRKIQDIPYSIPYITTTGAFTNDALHW- 1036 +DY++V I F SEV V+SLR+NSWR+I D+PY + Y G + N ALHW Sbjct: 151 DDYKLVRIAQFGGVDRKSFESEVKVFSLRKNSWRRIADMPYCVLYPGENGIYANGALHWL 210 Query: 1037 -TAFPLRSFNAVIIAYDVGGDSFREVPYPDHLISYSCKIDAAILDDNLCMM-WCDKGPYE 1210 + P + I+A D+G + + VP P+ + +C + +L L ++ + + Sbjct: 211 VSQDPDSTVADTIVALDLGVEDYHVVPKPE-FVDMNCNMGVGVLQGCLSLLAYARSERVD 269 Query: 1211 LWMMEEYGAIESWTKKFIIRLDLELQYTSPGLVPLCFIKDGATLVL--DSI----YDLRL 1372 +W+MEEY ESW+K F + LE+ L PL + K G +++ D++ YDL+ Sbjct: 270 VWVMEEYMVKESWSKLFSV-ARLEVIGILRSLKPLAYSKSGNEVLIEHDNVNLFWYDLKR 328 Query: 1373 FELGSKILKRWPVSTKDGFKSCCFEATIYTESLVTI 1480 E+ + ++ P++ FEA I SLV + Sbjct: 329 KEVVNVWIQGVPIT---------FEAEICVGSLVPL 355 Score = 48.1 bits (113), Expect(3) = 1e-32 Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 5/81 (6%) Frame = +3 Query: 663 DDPLKTGFFGIKIWGSSNGLVCMTAKQNTIMCLWNPSTRKHKILPTNTLNHINY-----V 827 D PL G+KI GS NGL+C+ + I LWNPS R H+++P + Y Sbjct: 79 DHPLMCYNHGVKILGSCNGLLCICNIVDDI-ALWNPSIRAHRVVPYLPVELKRYFGMCSC 137 Query: 828 QRKVYGFGYNPSIQLSKIMKL 890 + V+GFGY+ S K++++ Sbjct: 138 RVSVFGFGYDLSNDDYKLVRI 158 Score = 46.6 bits (109), Expect(3) = 1e-32 Identities = 22/49 (44%), Positives = 30/49 (61%) Frame = +1 Query: 424 NDLPHEIIELILLRLPVKSILRFRCVSKSWCSLLDDPNFVDRHFRKQLE 570 ++LP E+I IL RL K +L RCVSK W +L+D P F+ H +E Sbjct: 2 SNLPLEMIAEILCRLTAKKLLCCRCVSKRWRTLIDSPTFIYLHLNHSIE 50 >ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223534616|gb|EEF36313.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 414 Score = 78.6 bits (192), Expect(3) = 1e-30 Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 13/195 (6%) Frame = +2 Query: 875 EDYEVVEIR-----FLARFPSEVCVYSLRRNSWRKIQDIPYSIPYITTTGAFTNDALHWT 1039 +DY+V+ + L +F ++ VYSL+ NSWRKI + I + G +ALHW Sbjct: 157 DDYKVIRLGQYLDFSLQQFETDTMVYSLKSNSWRKIDGMSCIIGFDQKMGVLVGEALHWL 216 Query: 1040 AFPLRSF--NAVIIAYDVGGDSFREVPYPDHLI-----SYSCKIDAAILDDNLCMMWC-D 1195 A R VI+A ++G + FREVP PD ++ + + ++ ++++ L + + Sbjct: 217 ASRDRILLNPDVIVALNLGVEDFREVPGPDVVVVGANPNQNPSLNLGVVEEWLSVFAIYN 276 Query: 1196 KGPYELWMMEEYGAIESWTKKFIIRLDLELQYTSPGLVPLCFIKDGATLVLDSIYDLRLF 1375 ++W+M+EYGA +SWT+ F +P +VP F+K TLV D L Sbjct: 277 NTRLDIWVMKEYGAKDSWTRLFSF---------TPNVVP--FVKCLRTLVFSKNRDEVLL 325 Query: 1376 ELGSKILKRWPVSTK 1420 L K L + + K Sbjct: 326 GLQDKNLLWYKIREK 340 Score = 63.2 bits (152), Expect(3) = 1e-30 Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 4/73 (5%) Frame = +1 Query: 430 LPHEIIELILLRLPVKSILRFRCVSKSWCSLLDDPNFVDRHFRKQLEDKNQLDKKAIFVY 609 LP E++ IL RLPV +LRFR +SKSWC+ +DDPNF+ H +K E + L + Sbjct: 5 LPPELLTEILTRLPVDCLLRFRSISKSWCAKIDDPNFIKTHLKKSRETNSNLTLIFAGSH 64 Query: 610 P----NTSLNSLD 636 P N +L+SL+ Sbjct: 65 PDYFYNVNLDSLN 77 Score = 40.0 bits (92), Expect(3) = 1e-30 Identities = 21/35 (60%), Positives = 23/35 (65%) Frame = +3 Query: 693 IKIWGSSNGLVCMTAKQNTIMCLWNPSTRKHKILP 797 IKI GS NGL+C I L NPSTRKHK+LP Sbjct: 96 IKIVGSCNGLLCFGNASGRIT-LMNPSTRKHKVLP 129 >ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max] gi|255637050|gb|ACU18857.1| unknown [Glycine max] Length = 406 Score = 79.7 bits (195), Expect(3) = 2e-28 Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 13/214 (6%) Frame = +2 Query: 875 EDYEVVEIRFLARFPSE------VCVYSLRRNSWRKIQDIPYSIPYITTTGAFTNDALHW 1036 EDY+VV + PSE V VYS+ NSWRKIQD P+ +G F + L+W Sbjct: 202 EDYKVVAVFC---DPSEYFIECKVKVYSMATNSWRKIQDFPHGFLPFQNSGKFVSGTLNW 258 Query: 1037 TA---FPLRSFNAVIIAYDVGGDSFREVPYPDHLISYSCKIDAAILDDNLCMMW-CDKGP 1204 A SF VI++ D+ +++REV PD+ +L LCM + K Sbjct: 259 AANHSIGPSSF-WVIVSLDLHKETYREVLPPDYEKEDCSTPSLGVLQGCLCMNYDYKKTH 317 Query: 1205 YELWMMEEYGAIESWTKKFIIRL---DLELQYTSPGLVPLCFIKDGATLVLDSIYDLRLF 1375 + +WMM++YG ESW K I + Y+ P +I + ++L +DL L+ Sbjct: 318 FVVWMMKDYGVRESWVKLVSIPYVPNPEDFSYSGP-----YYISENGKVLLMFEFDLILY 372 Query: 1376 ELGSKILKRWPVSTKDGFKSCCFEATIYTESLVT 1477 + + K + + G+ F+A +Y E+LV+ Sbjct: 373 DPRNNSFKYPKIESGKGW----FDAEVYVETLVS 402 Score = 58.2 bits (139), Expect(3) = 2e-28 Identities = 28/57 (49%), Positives = 38/57 (66%) Frame = +1 Query: 382 SIETVQTMEKNRANNDLPHEIIELILLRLPVKSILRFRCVSKSWCSLLDDPNFVDRH 552 S+ Q M ++ LP E++ IL RLPVKS+L+FRCV KSW SL+ DP F+ +H Sbjct: 33 SVPKQQPMSESLPLPFLPDELVVEILSRLPVKSLLQFRCVCKSWMSLISDPYFMKKH 89 Score = 36.6 bits (83), Expect(3) = 2e-28 Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Frame = +3 Query: 636 FGNISF*IDDD---PLKTGFFGIKIWGSSNGLVCMTAKQNTIMCLWNPSTRKHKILP 797 F N S + DD P+K F I GS NGL+C K + ++ LWNPS R K P Sbjct: 124 FNNPSSTVCDDLNYPVKNKFRHDGIVGSCNGLLCFAIKGDCVL-LWNPSIRVSKKSP 179