BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015996
         (966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37628.3| unnamed protein product [Vitis vinifera]               73   8e-26
ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260...    73   8e-26
ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262...    73   2e-23
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera...    64   1e-20
ref|XP_002530078.1| conserved hypothetical protein [Ricinus comm...    65   2e-20

>emb|CBI37628.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score = 73.2 bits (178), Expect(2) = 8e-26
 Identities = 38/58 (65%), Positives = 45/58 (77%)
 Frame = +2

Query: 2   VPDFGYSPSPNTHNGSSGSDRNNSEPEPRKKVIPRREPVTQTRPSQSARVSNSPSIPN 175
           VPDFGYSP+P   NGSSGSD+NN+EPEP+ K IPR+E    TRP+QSA VS+S   PN
Sbjct: 216 VPDFGYSPNPQ--NGSSGSDKNNAEPEPKVKAIPRKE--VPTRPAQSAPVSSSFPPPN 269



 Score = 70.9 bits (172), Expect(2) = 8e-26
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = +3

Query: 255 KNNAIDPERLASARKRLQDNYQEAQNAKKQRTIQVMDLHDI 377
           ++ AIDP++ ASARKRL +NYQEAQNAKKQRTIQVMD+HDI
Sbjct: 272 RDTAIDPDKFASARKRLHENYQEAQNAKKQRTIQVMDIHDI 312


>ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260896 isoform 1 [Vitis
           vinifera]
          Length = 331

 Score = 73.2 bits (178), Expect(2) = 8e-26
 Identities = 38/58 (65%), Positives = 45/58 (77%)
 Frame = +2

Query: 2   VPDFGYSPSPNTHNGSSGSDRNNSEPEPRKKVIPRREPVTQTRPSQSARVSNSPSIPN 175
           VPDFGYSP+P   NGSSGSD+NN+EPEP+ K IPR+E    TRP+QSA VS+S   PN
Sbjct: 215 VPDFGYSPNPQ--NGSSGSDKNNAEPEPKVKAIPRKE--VPTRPAQSAPVSSSFPPPN 268



 Score = 70.9 bits (172), Expect(2) = 8e-26
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = +3

Query: 255 KNNAIDPERLASARKRLQDNYQEAQNAKKQRTIQVMDLHDI 377
           ++ AIDP++ ASARKRL +NYQEAQNAKKQRTIQVMD+HDI
Sbjct: 271 RDTAIDPDKFASARKRLHENYQEAQNAKKQRTIQVMDIHDI 311


>ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
           gi|296081186|emb|CBI18212.3| unnamed protein product
           [Vitis vinifera]
          Length = 332

 Score = 73.2 bits (178), Expect(2) = 2e-23
 Identities = 37/67 (55%), Positives = 46/67 (68%)
 Frame = +3

Query: 240 KLKEPKNNAIDPERLASARKRLQDNYQEAQNAKKQRTIQVMDLHDIXXXXXXXXXXXXXX 419
           K +E K++ +D E+LASAR+RL +NYQEAQNAKKQRTIQVMD+HDI              
Sbjct: 267 KQREQKDSLVDEEKLASARRRLHENYQEAQNAKKQRTIQVMDIHDI-PKPKNTFFAKNRG 325

Query: 420 XXQARHW 440
             QA+HW
Sbjct: 326 GVQAKHW 332



 Score = 62.8 bits (151), Expect(2) = 2e-23
 Identities = 30/56 (53%), Positives = 41/56 (73%)
 Frame = +2

Query: 2   VPDFGYSPSPNTHNGSSGSDRNNSEPEPRKKVIPRREPVTQTRPSQSARVSNSPSI 169
           VPDF YSP+P  HNGSSGSD+NN E EP++K +PRRE  T  +P+Q+  +  S ++
Sbjct: 214 VPDFAYSPNP--HNGSSGSDKNNVELEPKRKAVPRRE--TPNKPNQTPPIPTSVAL 265


>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c-like [Cucumis sativus]
           gi|449528150|ref|XP_004171069.1| PREDICTED: probable
           mediator of RNA polymerase II transcription subunit
           26c-like [Cucumis sativus]
          Length = 345

 Score = 63.9 bits (154), Expect(2) = 1e-20
 Identities = 31/52 (59%), Positives = 39/52 (75%)
 Frame = +2

Query: 2   VPDFGYSPSPNTHNGSSGSDRNNSEPEPRKKVIPRREPVTQTRPSQSARVSN 157
           VPDF YSP+P  HNG SGSDRNNSEPEP+ K +PRR+ +   +P+Q A  S+
Sbjct: 223 VPDFAYSPNP--HNGGSGSDRNNSEPEPKGKSVPRRDAL--PKPTQQAPTSS 270



 Score = 62.8 bits (151), Expect(2) = 1e-20
 Identities = 28/44 (63%), Positives = 38/44 (86%)
 Frame = +3

Query: 246 KEPKNNAIDPERLASARKRLQDNYQEAQNAKKQRTIQVMDLHDI 377
           ++ K    D ++LASARKRLQ+NY+EA+NAK+QRTIQVMD+H+I
Sbjct: 279 EQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEI 322


>ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis]
           gi|223530431|gb|EEF32318.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 362

 Score = 64.7 bits (156), Expect(2) = 2e-20
 Identities = 29/44 (65%), Positives = 38/44 (86%)
 Frame = +3

Query: 246 KEPKNNAIDPERLASARKRLQDNYQEAQNAKKQRTIQVMDLHDI 377
           ++ + N  D +RLASARKRLQ NY+EA+NAKKQRTIQVMD+H++
Sbjct: 296 EQQRENNFDSDRLASARKRLQANYKEAENAKKQRTIQVMDIHEL 339



 Score = 61.6 bits (148), Expect(2) = 2e-20
 Identities = 35/56 (62%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = +2

Query: 2   VPDFGYSPSPNTHNGSSGSDRNNSEPEPRKKVIPRREPVTQTRPS-QSARVSNSPS 166
           VPDF YSP+P  HNGSSGSD+NNSEPE R K +PR+E     RP+ QS  VS S S
Sbjct: 237 VPDFAYSPNP--HNGSSGSDKNNSEPERRPKPVPRKE--APPRPAQQSVPVSASAS 288