BLASTX nr result
ID: Coptis25_contig00015990
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00015990 (264 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003613148.1| Multidrug resistance protein ABC transporter... 79 5e-13 ref|XP_003613122.1| Multidrug resistance protein ABC transporter... 79 5e-13 ref|XP_003636077.1| Multidrug resistance protein ABC transporter... 79 5e-13 gb|ABD72482.1| MRP-like ABC transporter protein [Gossypium barba... 79 5e-13 gb|AFK47609.1| unknown [Lotus japonicus] 78 9e-13 >ref|XP_003613148.1| Multidrug resistance protein ABC transporter family [Medicago truncatula] gi|355514483|gb|AES96106.1| Multidrug resistance protein ABC transporter family [Medicago truncatula] Length = 1673 Score = 78.6 bits (192), Expect = 5e-13 Identities = 47/69 (68%), Positives = 52/69 (75%), Gaps = 2/69 (2%) Frame = -1 Query: 201 MGQRQLVCLG*VLLKRSKILVLDEATSLVDTAT*Q--TALFRKHLGSTSQNPVLTIAHGI 28 MGQRQLVCLG VLLK+SKILVLDEAT+ VDTAT RKH + + V+TIAH I Sbjct: 1408 MGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNLIQQTLRKHF---TDSTVITIAHRI 1464 Query: 27 TSVLDSDMV 1 TSVLDSDMV Sbjct: 1465 TSVLDSDMV 1473 >ref|XP_003613122.1| Multidrug resistance protein ABC transporter family [Medicago truncatula] gi|355514457|gb|AES96080.1| Multidrug resistance protein ABC transporter family [Medicago truncatula] Length = 1490 Score = 78.6 bits (192), Expect = 5e-13 Identities = 47/69 (68%), Positives = 52/69 (75%), Gaps = 2/69 (2%) Frame = -1 Query: 201 MGQRQLVCLG*VLLKRSKILVLDEATSLVDTAT*Q--TALFRKHLGSTSQNPVLTIAHGI 28 MGQRQLVCLG VLLK+SKILVLDEAT+ VDTAT RKH + + V+TIAH I Sbjct: 1385 MGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNLIQQTLRKHF---TDSTVITIAHRI 1441 Query: 27 TSVLDSDMV 1 TSVLDSDMV Sbjct: 1442 TSVLDSDMV 1450 >ref|XP_003636077.1| Multidrug resistance protein ABC transporter family [Medicago truncatula] gi|355502012|gb|AES83215.1| Multidrug resistance protein ABC transporter family [Medicago truncatula] Length = 1285 Score = 78.6 bits (192), Expect = 5e-13 Identities = 49/88 (55%), Positives = 58/88 (65%), Gaps = 2/88 (2%) Frame = -1 Query: 258 RRK*SLIH*LLQKEKTGVCMGQRQLVCLG*VLLKRSKILVLDEATSLVDTAT*Q--TALF 85 R+K +H + + MGQRQLVCLG VLLK+SKILVLDEAT+ VDTAT Sbjct: 1159 RKKEGKLHSTVTENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNIIQQTL 1218 Query: 84 RKHLGSTSQNPVLTIAHGITSVLDSDMV 1 +KH S V+TIAH ITS+LDSDMV Sbjct: 1219 KKHF---SDCTVITIAHRITSILDSDMV 1243 >gb|ABD72482.1| MRP-like ABC transporter protein [Gossypium barbadense] Length = 1075 Score = 78.6 bits (192), Expect = 5e-13 Identities = 49/70 (70%), Positives = 55/70 (78%), Gaps = 3/70 (4%) Frame = -1 Query: 201 MGQRQLVCLG*VLLKRSKILVLDEATSLVDTAT---*QTALFRKHLGSTSQNPVLTIAHG 31 MGQRQLVCLG VLLK+SKILVLDEAT+ VDTAT QT L R+H + + V+TIAH Sbjct: 970 MGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNLIQTTL-REHFSNCT---VITIAHR 1025 Query: 30 ITSVLDSDMV 1 ITSVLDSDMV Sbjct: 1026 ITSVLDSDMV 1035 >gb|AFK47609.1| unknown [Lotus japonicus] Length = 510 Score = 77.8 bits (190), Expect = 9e-13 Identities = 45/69 (65%), Positives = 53/69 (76%), Gaps = 2/69 (2%) Frame = -1 Query: 201 MGQRQLVCLG*VLLKRSKILVLDEATSLVDTAT*Q--TALFRKHLGSTSQNPVLTIAHGI 28 MGQRQLVCLG VLLK+SK+LVLDEAT+ VDTAT R+H S++ V+TIAH I Sbjct: 399 MGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF---SESTVITIAHRI 455 Query: 27 TSVLDSDMV 1 TSV+DSDMV Sbjct: 456 TSVIDSDMV 464