BLASTX nr result

ID: Coptis25_contig00015990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015990
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613148.1| Multidrug resistance protein ABC transporter...    79   5e-13
ref|XP_003613122.1| Multidrug resistance protein ABC transporter...    79   5e-13
ref|XP_003636077.1| Multidrug resistance protein ABC transporter...    79   5e-13
gb|ABD72482.1| MRP-like ABC transporter protein [Gossypium barba...    79   5e-13
gb|AFK47609.1| unknown [Lotus japonicus]                               78   9e-13

>ref|XP_003613148.1| Multidrug resistance protein ABC transporter family [Medicago
            truncatula] gi|355514483|gb|AES96106.1| Multidrug
            resistance protein ABC transporter family [Medicago
            truncatula]
          Length = 1673

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 47/69 (68%), Positives = 52/69 (75%), Gaps = 2/69 (2%)
 Frame = -1

Query: 201  MGQRQLVCLG*VLLKRSKILVLDEATSLVDTAT*Q--TALFRKHLGSTSQNPVLTIAHGI 28
            MGQRQLVCLG VLLK+SKILVLDEAT+ VDTAT        RKH    + + V+TIAH I
Sbjct: 1408 MGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNLIQQTLRKHF---TDSTVITIAHRI 1464

Query: 27   TSVLDSDMV 1
            TSVLDSDMV
Sbjct: 1465 TSVLDSDMV 1473


>ref|XP_003613122.1| Multidrug resistance protein ABC transporter family [Medicago
            truncatula] gi|355514457|gb|AES96080.1| Multidrug
            resistance protein ABC transporter family [Medicago
            truncatula]
          Length = 1490

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 47/69 (68%), Positives = 52/69 (75%), Gaps = 2/69 (2%)
 Frame = -1

Query: 201  MGQRQLVCLG*VLLKRSKILVLDEATSLVDTAT*Q--TALFRKHLGSTSQNPVLTIAHGI 28
            MGQRQLVCLG VLLK+SKILVLDEAT+ VDTAT        RKH    + + V+TIAH I
Sbjct: 1385 MGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNLIQQTLRKHF---TDSTVITIAHRI 1441

Query: 27   TSVLDSDMV 1
            TSVLDSDMV
Sbjct: 1442 TSVLDSDMV 1450


>ref|XP_003636077.1| Multidrug resistance protein ABC transporter family [Medicago
            truncatula] gi|355502012|gb|AES83215.1| Multidrug
            resistance protein ABC transporter family [Medicago
            truncatula]
          Length = 1285

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 49/88 (55%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
 Frame = -1

Query: 258  RRK*SLIH*LLQKEKTGVCMGQRQLVCLG*VLLKRSKILVLDEATSLVDTAT*Q--TALF 85
            R+K   +H  + +      MGQRQLVCLG VLLK+SKILVLDEAT+ VDTAT        
Sbjct: 1159 RKKEGKLHSTVTENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNIIQQTL 1218

Query: 84   RKHLGSTSQNPVLTIAHGITSVLDSDMV 1
            +KH    S   V+TIAH ITS+LDSDMV
Sbjct: 1219 KKHF---SDCTVITIAHRITSILDSDMV 1243


>gb|ABD72482.1| MRP-like ABC transporter protein [Gossypium barbadense]
          Length = 1075

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 49/70 (70%), Positives = 55/70 (78%), Gaps = 3/70 (4%)
 Frame = -1

Query: 201  MGQRQLVCLG*VLLKRSKILVLDEATSLVDTAT---*QTALFRKHLGSTSQNPVLTIAHG 31
            MGQRQLVCLG VLLK+SKILVLDEAT+ VDTAT    QT L R+H  + +   V+TIAH 
Sbjct: 970  MGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNLIQTTL-REHFSNCT---VITIAHR 1025

Query: 30   ITSVLDSDMV 1
            ITSVLDSDMV
Sbjct: 1026 ITSVLDSDMV 1035


>gb|AFK47609.1| unknown [Lotus japonicus]
          Length = 510

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 45/69 (65%), Positives = 53/69 (76%), Gaps = 2/69 (2%)
 Frame = -1

Query: 201 MGQRQLVCLG*VLLKRSKILVLDEATSLVDTAT*Q--TALFRKHLGSTSQNPVLTIAHGI 28
           MGQRQLVCLG VLLK+SK+LVLDEAT+ VDTAT        R+H    S++ V+TIAH I
Sbjct: 399 MGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHF---SESTVITIAHRI 455

Query: 27  TSVLDSDMV 1
           TSV+DSDMV
Sbjct: 456 TSVIDSDMV 464


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