BLASTX nr result

ID: Coptis25_contig00015989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015989
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321359.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002519603.1| conserved hypothetical protein [Ricinus comm...    90   2e-16
ref|XP_002966238.1| hypothetical protein SELMODRAFT_407613 [Sela...    69   3e-10
ref|XP_002982310.1| hypothetical protein SELMODRAFT_421789 [Sela...    69   3e-10
ref|XP_003532769.1| PREDICTED: uncharacterized protein LOC100794...    65   4e-09

>ref|XP_002321359.1| predicted protein [Populus trichocarpa] gi|222868355|gb|EEF05486.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/78 (64%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = +2

Query: 113 LSFSASLPNDVQGVYA-DSICAVKYTMDPFVDLRESILEMIKNVGVRNWEEMEELIYCYV 289
           +S SASLP DV G ++ D+ICAVK + DPF D+R SILEMI+NVGV +W+EMEEL+YCY+
Sbjct: 21  ISLSASLPEDVCGAFSGDTICAVKLSKDPFSDMRASILEMIQNVGVHDWDEMEELVYCYI 80

Query: 290 VLNSSEIHGFIVQAFLSL 343
            LNS ++HG I  AFLSL
Sbjct: 81  ALNSPDLHGIIANAFLSL 98


>ref|XP_002519603.1| conserved hypothetical protein [Ricinus communis]
           gi|223541193|gb|EEF42748.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 99

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 47/88 (53%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
 Frame = +2

Query: 83  KKHSRHYTATLSFSASLPNDVQGVYADSICAVKYTMDPFVDLRESILEMIKNVGVRNWEE 262
           KK   + +  +SFSASLP DV G  A SI  VK ++DPF +L+ SI+EMI+ + VR+W  
Sbjct: 3   KKIWHNRSNRISFSASLPEDVCGELAGSIGIVKLSVDPFSELKASIVEMIEELDVRDWNA 62

Query: 263 MEELIYCYVVLN-SSEIHGFIVQAFLSL 343
           MEEL+YCY+VLN SS++H  I  AF+SL
Sbjct: 63  MEELVYCYIVLNSSSQVHHIIKDAFVSL 90


>ref|XP_002966238.1| hypothetical protein SELMODRAFT_407613 [Selaginella moellendorffii]
           gi|300165658|gb|EFJ32265.1| hypothetical protein
           SELMODRAFT_407613 [Selaginella moellendorffii]
          Length = 227

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/94 (37%), Positives = 56/94 (59%)
 Frame = +2

Query: 62  KLTEKRMKKHSRHYTATLSFSASLPNDVQGVYADSICAVKYTMDPFVDLRESILEMIKNV 241
           K+T +R + HS         SA+LP D++G  +++I  V  + DP+ D R S+ +M++  
Sbjct: 126 KITRQRRRNHS--------LSAALPPDLRGPASNAIPLVMESCDPYNDFRVSMEQMVREN 177

Query: 242 GVRNWEEMEELIYCYVVLNSSEIHGFIVQAFLSL 343
           G+  W E++EL+YCY+ LNS + H  I  AF  L
Sbjct: 178 GIFEWPELQELLYCYIALNSPDQHESIKLAFADL 211


>ref|XP_002982310.1| hypothetical protein SELMODRAFT_421789 [Selaginella moellendorffii]
           gi|300149902|gb|EFJ16555.1| hypothetical protein
           SELMODRAFT_421789 [Selaginella moellendorffii]
          Length = 227

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/94 (37%), Positives = 56/94 (59%)
 Frame = +2

Query: 62  KLTEKRMKKHSRHYTATLSFSASLPNDVQGVYADSICAVKYTMDPFVDLRESILEMIKNV 241
           K+T +R + HS         SA+LP D++G  +++I  V  + DP+ D R S+ +M++  
Sbjct: 126 KITRQRRRNHS--------LSAALPPDLRGPASNAIPLVMESCDPYNDFRVSMEQMVREN 177

Query: 242 GVRNWEEMEELIYCYVVLNSSEIHGFIVQAFLSL 343
           G+  W E++EL+YCY+ LNS + H  I  AF  L
Sbjct: 178 GIFEWPELQELLYCYIALNSPDQHESIKLAFADL 211


>ref|XP_003532769.1| PREDICTED: uncharacterized protein LOC100794362 [Glycine max]
          Length = 404

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/98 (38%), Positives = 54/98 (55%)
 Frame = +2

Query: 41  VQAMEAKKLTEKRMKKHSRHYTATLSFSASLPNDVQGVYADSICAVKYTMDPFVDLRESI 220
           ++AME KK  + +MKK       T           +G+  DS   VK ++DP  D R+S+
Sbjct: 304 IKAMEEKKKAKLKMKKEEEIVEET----------EEGL--DSFAVVKCSLDPQKDFRDSM 351

Query: 221 LEMIKNVGVRNWEEMEELIYCYVVLNSSEIHGFIVQAF 334
           +EMI    +   EEME+L+ CY+ LNSSE H  I+Q F
Sbjct: 352 IEMITEKQISEPEEMEDLLACYLTLNSSEYHDLIIQVF 389


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