BLASTX nr result

ID: Coptis25_contig00015987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015987
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320678.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_002510065.1| conserved hypothetical protein [Ricinus comm...    70   1e-10
ref|XP_004141410.1| PREDICTED: protein PHLOEM PROTEIN 2-LIKE A10...    70   2e-10
ref|XP_002525302.1| conserved hypothetical protein [Ricinus comm...    65   4e-09
ref|XP_002310887.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09

>ref|XP_002320678.1| predicted protein [Populus trichocarpa] gi|222861451|gb|EEE98993.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/70 (47%), Positives = 49/70 (70%)
 Frame = -3

Query: 211 MDLEFINKGLDYSKRRKKWIILLAAFGITGYSVYKVYNLPSXXXXXXXXXXXIGTVISLI 32
           MDLE +  G+ +S+R+KK +ILLA FG++GY  Y++YNLP+           +G +IS+ 
Sbjct: 1   MDLELVKSGVHFSRRKKKLLILLAVFGVSGYGFYRLYNLPAVARKRRGFMKLMGALISIA 60

Query: 31  QVVSDSTETI 2
           ++VSDSTETI
Sbjct: 61  EMVSDSTETI 70


>ref|XP_002510065.1| conserved hypothetical protein [Ricinus communis]
           gi|223550766|gb|EEF52252.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 409

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/70 (45%), Positives = 45/70 (64%)
 Frame = -3

Query: 211 MDLEFINKGLDYSKRRKKWIILLAAFGITGYSVYKVYNLPSXXXXXXXXXXXIGTVISLI 32
           MD   + +G+  S RR++WI+LLAA G++GY  YKVYNLPS            G +IS+ 
Sbjct: 1   MDFNLVKRGVYLSPRRRRWILLLAALGVSGYGAYKVYNLPSIVKKRKRYMKLFGALISVA 60

Query: 31  QVVSDSTETI 2
           ++VSDS +TI
Sbjct: 61  ELVSDSADTI 70


>ref|XP_004141410.1| PREDICTED: protein PHLOEM PROTEIN 2-LIKE A10-like [Cucumis sativus]
           gi|449517421|ref|XP_004165744.1| PREDICTED: protein
           PHLOEM PROTEIN 2-LIKE A10-like [Cucumis sativus]
          Length = 422

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/70 (44%), Positives = 45/70 (64%)
 Frame = -3

Query: 211 MDLEFINKGLDYSKRRKKWIILLAAFGITGYSVYKVYNLPSXXXXXXXXXXXIGTVISLI 32
           MD E + +GL +S+R KKW++LLA  G++GY  YKVY+LPS            G +IS+ 
Sbjct: 1   MDFELVRRGLGFSQRNKKWLVLLALTGVSGYGAYKVYHLPSVETKRKRLMRLFGAMISVA 60

Query: 31  QVVSDSTETI 2
            +V+DS+E I
Sbjct: 61  DMVADSSEAI 70


>ref|XP_002525302.1| conserved hypothetical protein [Ricinus communis]
           gi|223535460|gb|EEF37130.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 434

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
 Frame = -3

Query: 211 MDLEFINKG-LDYSKRRKKWIILLAAFGITGYSVYKVYNLPSXXXXXXXXXXXIGTVISL 35
           MDL+ + K  LDY++++K+W+ +L A G T Y++Y+ Y+LPS           +G +IS+
Sbjct: 1   MDLQLVKKSVLDYTQKKKRWVAMLGAIGFTSYALYRTYHLPSIAQKRKRISKLLGALISV 60

Query: 34  IQVVSDSTETI 2
            +V+SDS ETI
Sbjct: 61  AEVISDSAETI 71


>ref|XP_002310887.1| predicted protein [Populus trichocarpa] gi|222853790|gb|EEE91337.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = -3

Query: 211 MDLEFINKGL-DYSKRRKKWIILLAAFGITGYSVYKVYNLPSXXXXXXXXXXXIGTVISL 35
           MDL+ + KGL DY++R+K+W +LLAA G + Y+ YKVY+ P             G  +++
Sbjct: 1   MDLQLVKKGLLDYTRRKKRWALLLAALGFSTYTAYKVYHFPLLAEKRKRVSKIFGAFVAV 60

Query: 34  IQVVSDSTETI 2
            +V+SDS ETI
Sbjct: 61  AEVISDSAETI 71


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