BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015985
         (966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528428.1| conserved hypothetical protein [Ricinus comm...   120   4e-25
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   120   6e-25
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   119   1e-24
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   116   9e-24
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   116   9e-24

>ref|XP_002528428.1| conserved hypothetical protein [Ricinus communis]
           gi|223532164|gb|EEF33970.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score =  120 bits (302), Expect = 4e-25
 Identities = 90/223 (40%), Positives = 118/223 (52%), Gaps = 27/223 (12%)
 Frame = +1

Query: 148 GALAFVKPGNKVWTCI-DISSDGQLIDDIIYYEDKFYVVDNDGRVFSCNLRHPSPSLSVV 324
           G LA  K G++ WT I D+ S     DD+I Y+  FY VDN GR     L   +  L ++
Sbjct: 121 GKLAMFKSGDRRWTIIQDMPSP---YDDVIVYKGNFYAVDNTGRTVIVRL---NTELGLI 174

Query: 325 APGPDLFG--KKYLVELCGDLLQIVR---------DLEFGDDFR---AGYV---TVGFTV 453
           A    +FG  KKYLVE  GDLL +            L FG++F    A Y+   TV F V
Sbjct: 175 AN--PVFGGDKKYLVESLGDLLLVDMYLSIDTAEGGLSFGEEFLEHLAQYMSERTVRFKV 232

Query: 454 FKLDRLGANWIEVKSLGGRILFLGDNSSMSLSVSDMPGCKPNGIYFTDDMHCGFYNDLYG 633
           FKLD+    WIEVKSLG R+LFLGD+S+ S SVSD+ GCK N I+F D+       +L  
Sbjct: 233 FKLDKEAQTWIEVKSLGDRVLFLGDDSTFSASVSDLSGCKGNCIFFVDNFFYSRDENLRA 292

Query: 634 -------IHPYDMGVFSMEDRSIEL--HYPMESKVILPAPTWI 735
                  +   D+GVF +E   I    +YP  +K+  P P W+
Sbjct: 293 NGGDDGVLAGRDIGVFDLETGCIGPLGNYPEYAKMFWPPPHWL 335


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  120 bits (300), Expect = 6e-25
 Identities = 75/205 (36%), Positives = 110/205 (53%), Gaps = 6/205 (2%)
 Frame = +1

Query: 148 GALAFVKPGNKVWTCIDISSDGQLIDDIIYYEDKFYVVDNDGRVFSCNLRHPSPSLSVVA 327
           G LA+ K G++ W  ++ S      +D+IY+   FY V+  G++  C++   SP +S + 
Sbjct: 191 GDLAYCKNGDECWNIVENSRS--FSEDVIYFNGLFYAVNKAGQIVVCDVNGNSPKVSFIE 248

Query: 328 PGPDLFGK-KYLVELCGDLLQIVRDLEFGDDFRAG-YVTVGFTVFKLDRLGANWIEVKSL 501
               + G  +YLV     LL + R L+   +F    Y T  F VFKLD  G  W  V SL
Sbjct: 249 TPRQIGGDMQYLVSSGDGLLLVTRYLDLDVEFDIFIYKTARFEVFKLDLNGPRWERVTSL 308

Query: 502 GGRILFLGDNSSMSLSVSDMPGCKPNGIYFTDDMHCGFYNDLYGIHPYDMGVFSMEDRSI 681
           G  +LF+G+NSS++LS S + GC  + IY+TDD     Y+   G H  D+G+F + D SI
Sbjct: 309 GDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIGEH--DLGIFKLSDGSI 366

Query: 682 E--LHYPME--SKVILPAPTWIEPS 744
           E    YP    S++  P P WI P+
Sbjct: 367 EPLPCYPRNSYSRLQWPPPLWISPN 391


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score =  119 bits (298), Expect = 1e-24
 Identities = 77/236 (32%), Positives = 125/236 (52%), Gaps = 12/236 (5%)
 Frame = +1

Query: 73  KQILTVDEPVLDTNYVVMASYGQFVGALAFVKPGNKVWTCIDISSDGQLIDDIIYYEDKF 252
           ++++    P+ D N+VV+A   Q    LA+ + G+K W+ ++ +      +D+I+    F
Sbjct: 166 RKVVLSSSPLKDNNFVVIAILNQ-TDDLAYCRNGDKSWSLVENARS--FCEDVIFVNGMF 222

Query: 253 YVVDNDGRVFSCNLRHPSPSLSVVAPGPDLFGK-KYLVELCGDLLQIVR--DLEFGDDF- 420
           Y V+  G++  C++   SP +S +       G  +YLV    +LL + R  DLE+  D  
Sbjct: 223 YAVNKAGQIVICDISSDSPRVSFMETPRQAGGDMQYLVNSGDELLLVTRYLDLEYEFDHP 282

Query: 421 ----RAGYVTVGFTVFKLDRLGANWIEVKSLGGRILFLGDNSSMSLSVSDMPGCKPNGIY 588
                  Y T+ F VF+LD  G  W+ + +LG + LF+G+NSS+SLS +D  GC  N IY
Sbjct: 283 DMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIY 342

Query: 589 FTDDMHCGFYNDLYGIHPYDMGVFSMEDRSIE--LHYP--MESKVILPAPTWIEPS 744
           +TDD     Y+  +G H  D+G+F + D +IE    YP    S +    P W+ P+
Sbjct: 343 YTDDYLDANYDGHFGDH--DLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSPN 396


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  116 bits (290), Expect = 9e-24
 Identities = 79/238 (33%), Positives = 121/238 (50%), Gaps = 7/238 (2%)
 Frame = +1

Query: 52  MHNTIAYKQILTVDEPVLDTNYVVMASYGQFVGALAFVKPGNKVWTCIDISSDGQLIDDI 231
           M ++   K IL+   P   ++++ +    Q  G LA  +  +  WT ++ +      +D+
Sbjct: 157 MRDSFIKKTILS-SSPANGSDFIAVVILNQ-TGDLALCRKSDDSWTFLEDAQS--YAEDV 212

Query: 232 IYYEDKFYVVDNDGRVFSCNLRHPSPSLSVVAPGPDLFGK--KYLVELCGDLLQIVRDLE 405
           I++   FY V+  G +  C++   SP +S++   P  FG   +YLVE   +LL + R L+
Sbjct: 213 IFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEM-PQQFGGDLQYLVESGEELLLVTRYLD 271

Query: 406 FGDDFRAG-----YVTVGFTVFKLDRLGANWIEVKSLGGRILFLGDNSSMSLSVSDMPGC 570
              D         Y T  F V +LD     W  V SLG R LFLG+N S+SLS  D PGC
Sbjct: 272 LTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGC 331

Query: 571 KPNGIYFTDDMHCGFYNDLYGIHPYDMGVFSMEDRSIELHYPMESKVILPAPTWIEPS 744
           K N IY+TDD     Y+ + G    D+G+F++ED SIE       ++  P P W+ P+
Sbjct: 332 KGNCIYYTDDYSEDNYDGIGG--EQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTPN 387


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  116 bits (290), Expect = 9e-24
 Identities = 79/238 (33%), Positives = 121/238 (50%), Gaps = 7/238 (2%)
 Frame = +1

Query: 52  MHNTIAYKQILTVDEPVLDTNYVVMASYGQFVGALAFVKPGNKVWTCIDISSDGQLIDDI 231
           M ++   K IL+   P   ++++ +    Q  G LA  +  +  WT ++ +      +D+
Sbjct: 157 MRDSFIKKTILS-SSPANGSDFIAVVILNQ-TGDLALCRKSDDSWTFLEDAQSYS--EDV 212

Query: 232 IYYEDKFYVVDNDGRVFSCNLRHPSPSLSVVAPGPDLFGK--KYLVELCGDLLQIVRDLE 405
           I++   FY V+  G +  C++   SP +S++   P  FG   +YLVE   +LL + R L+
Sbjct: 213 IFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEM-PQQFGGDLQYLVESGEELLLVTRYLD 271

Query: 406 FGDDFRAG-----YVTVGFTVFKLDRLGANWIEVKSLGGRILFLGDNSSMSLSVSDMPGC 570
              D         Y T  F V +LD     W  V SLG R LFLG+N S+SLS  D PGC
Sbjct: 272 LTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGC 331

Query: 571 KPNGIYFTDDMHCGFYNDLYGIHPYDMGVFSMEDRSIELHYPMESKVILPAPTWIEPS 744
           K N IY+TDD     Y+ + G    D+G+F++ED SIE       ++  P P W+ P+
Sbjct: 332 KGNCIYYTDDYSEDNYDGIGG--EQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTPN 387