BLASTX nr result

ID: Coptis25_contig00015977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015977
         (1563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510586.1| protein with unknown function [Ricinus commu...   283   1e-73
ref|XP_002300690.1| predicted protein [Populus trichocarpa] gi|2...   276   1e-71
emb|CBI19924.3| unnamed protein product [Vitis vinifera]              275   2e-71
ref|XP_002269229.1| PREDICTED: protein FAM206A [Vitis vinifera]       272   2e-70
ref|XP_004136372.1| PREDICTED: protein FAM206A-like [Cucumis sat...   264   6e-68

>ref|XP_002510586.1| protein with unknown function [Ricinus communis]
           gi|223551287|gb|EEF52773.1| protein with unknown
           function [Ricinus communis]
          Length = 282

 Score =  283 bits (723), Expect = 1e-73
 Identities = 134/208 (64%), Positives = 165/208 (79%), Gaps = 8/208 (3%)
 Frame = +3

Query: 342 SLSVLDNPMDDGHTNTETASPHQQQ--------DEELHSLLVPNIDDLPVTPPSATDSNF 497
           +++V DNP        E  S   Q+        DE+LH LL+P++ +LP+ PPS+ ++NF
Sbjct: 66  TITVQDNPTHKQEQKQEKQSKQVQEAEEEDQVTDEDLHKLLLPDVSNLPIVPPSSIETNF 125

Query: 498 VTYFAPDFINPGHDQYVHRHANGLCVIGLAPTHIALRENEPVKSVDFNVGKSNRSEIKVT 677
           V+YFAPDF+ PGHDQYV+RHANGLCVIGLAPTH+A ++   + +VDFNVGKS+RS  KVT
Sbjct: 126 VSYFAPDFMKPGHDQYVYRHANGLCVIGLAPTHVAFKDEGGITAVDFNVGKSDRSGFKVT 185

Query: 678 GKHKRNARHFERNTALCKVFVKETSYIVRCCVKGSLLEVNDRLIKQPDLLNSAADREGYI 857
           GK K+NA+HFE NTALCKV  ++ SYIVRCCVKGSLLEVND+LIKQP LLNS+ADREGY 
Sbjct: 186 GKRKKNAQHFESNTALCKVCTRDASYIVRCCVKGSLLEVNDKLIKQPGLLNSSADREGYT 245

Query: 858 AITMPKPGDWLKIRNLLLTLEEYKKLRD 941
           AI MPKPGDWLKI++ LLTLEEYKKLR+
Sbjct: 246 AIMMPKPGDWLKIKSSLLTLEEYKKLRE 273


>ref|XP_002300690.1| predicted protein [Populus trichocarpa] gi|222842416|gb|EEE79963.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  276 bits (706), Expect = 1e-71
 Identities = 129/178 (72%), Positives = 153/178 (85%)
 Frame = +3

Query: 408 QQQDEELHSLLVPNIDDLPVTPPSATDSNFVTYFAPDFINPGHDQYVHRHANGLCVIGLA 587
           ++++EELH LL+P+I DLP TPPS+  +NFV+YFAPDF+ PGHDQYV+RHANGLCVIGLA
Sbjct: 26  KEEEEELHKLLLPDIRDLPTTPPSSVQTNFVSYFAPDFVKPGHDQYVYRHANGLCVIGLA 85

Query: 588 PTHIALRENEPVKSVDFNVGKSNRSEIKVTGKHKRNARHFERNTALCKVFVKETSYIVRC 767
            TH+A ++   +  VDFNVGKS+RS IKVTGK K+NA+HFE NTALCKV  +  SYIVRC
Sbjct: 86  RTHVAFKDEGGITVVDFNVGKSDRSGIKVTGKRKKNAQHFESNTALCKVCTQNDSYIVRC 145

Query: 768 CVKGSLLEVNDRLIKQPDLLNSAADREGYIAITMPKPGDWLKIRNLLLTLEEYKKLRD 941
           CVKGSLLEVNDRLIKQP+LLNS+ADREGYIAI MPKP DWLK++  LL LEEYKKLR+
Sbjct: 146 CVKGSLLEVNDRLIKQPELLNSSADREGYIAIIMPKPADWLKVKASLLGLEEYKKLRE 203


>emb|CBI19924.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  275 bits (703), Expect = 2e-71
 Identities = 131/197 (66%), Positives = 161/197 (81%), Gaps = 2/197 (1%)
 Frame = +3

Query: 363  PMDDGHTNTETASPHQQ--QDEELHSLLVPNIDDLPVTPPSATDSNFVTYFAPDFINPGH 536
            PM+D     E+ +P     ++EEL  LLVP++ +LP+ PPSA  SNFV+YFAPDF+ PGH
Sbjct: 716  PMEDHSDAVESNNPGGGGGEEEELQRLLVPDVHNLPLFPPSAVQSNFVSYFAPDFMKPGH 775

Query: 537  DQYVHRHANGLCVIGLAPTHIALRENEPVKSVDFNVGKSNRSEIKVTGKHKRNARHFERN 716
            DQYV+RHANGLCVIGLAP+H+AL E   V +VDFNVGK++RS IKVTGK K+NA+HFE N
Sbjct: 776  DQYVYRHANGLCVIGLAPSHVALTEKGGVTAVDFNVGKTDRSGIKVTGKRKKNAQHFESN 835

Query: 717  TALCKVFVKETSYIVRCCVKGSLLEVNDRLIKQPDLLNSAADREGYIAITMPKPGDWLKI 896
            +ALCKV   + SYIVRCCVKG+LLEVNDRLIKQP LLNS+ADREGYIAI MPKP DWLK+
Sbjct: 836  SALCKVCTNDASYIVRCCVKGNLLEVNDRLIKQPGLLNSSADREGYIAIIMPKPADWLKV 895

Query: 897  RNLLLTLEEYKKLRDLC 947
            +  L+ +EEYKKL+++C
Sbjct: 896  KASLIDIEEYKKLKEVC 912


>ref|XP_002269229.1| PREDICTED: protein FAM206A [Vitis vinifera]
          Length = 196

 Score =  272 bits (696), Expect = 2e-70
 Identities = 126/178 (70%), Positives = 153/178 (85%)
 Frame = +3

Query: 414 QDEELHSLLVPNIDDLPVTPPSATDSNFVTYFAPDFINPGHDQYVHRHANGLCVIGLAPT 593
           ++EEL  LLVP++ +LP+ PPSA  SNFV+YFAPDF+ PGHDQYV+RHANGLCVIGLAP+
Sbjct: 19  EEEELQRLLVPDVHNLPLFPPSAVQSNFVSYFAPDFMKPGHDQYVYRHANGLCVIGLAPS 78

Query: 594 HIALRENEPVKSVDFNVGKSNRSEIKVTGKHKRNARHFERNTALCKVFVKETSYIVRCCV 773
           H+AL E   V +VDFNVGK++RS IKVTGK K+NA+HFE N+ALCKV   + SYIVRCCV
Sbjct: 79  HVALTEKGGVTAVDFNVGKTDRSGIKVTGKRKKNAQHFESNSALCKVCTNDASYIVRCCV 138

Query: 774 KGSLLEVNDRLIKQPDLLNSAADREGYIAITMPKPGDWLKIRNLLLTLEEYKKLRDLC 947
           KG+LLEVNDRLIKQP LLNS+ADREGYIAI MPKP DWLK++  L+ +EEYKKL+++C
Sbjct: 139 KGNLLEVNDRLIKQPGLLNSSADREGYIAIIMPKPADWLKVKASLIDIEEYKKLKEVC 196


>ref|XP_004136372.1| PREDICTED: protein FAM206A-like [Cucumis sativus]
           gi|449511231|ref|XP_004163899.1| PREDICTED: protein
           FAM206A-like [Cucumis sativus]
          Length = 223

 Score =  264 bits (674), Expect = 6e-68
 Identities = 127/200 (63%), Positives = 156/200 (78%), Gaps = 6/200 (3%)
 Frame = +3

Query: 363 PMDDGHTNTETASP------HQQQDEELHSLLVPNIDDLPVTPPSATDSNFVTYFAPDFI 524
           P  + H   + A P        +QDEEL  LL P++ DLP+ PPSA ++NFV+YFAPDFI
Sbjct: 23  PPLENHELQQLAEPLPKSFQEDEQDEELRKLLTPDVRDLPLVPPSAVETNFVSYFAPDFI 82

Query: 525 NPGHDQYVHRHANGLCVIGLAPTHIALRENEPVKSVDFNVGKSNRSEIKVTGKHKRNARH 704
             GHDQYV+RHANGLCV+GLA THIA +++  V +VDFNVGKS+RS  KVTGK K+NA+ 
Sbjct: 83  KEGHDQYVYRHANGLCVVGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKKNAQF 142

Query: 705 FERNTALCKVFVKETSYIVRCCVKGSLLEVNDRLIKQPDLLNSAADREGYIAITMPKPGD 884
           FE N+ALCKV+ K+ SYIVRC VKGSLLEVNDRLIKQP+LLN+   REGYIAI MPKP D
Sbjct: 143 FEPNSALCKVYTKDASYIVRCSVKGSLLEVNDRLIKQPELLNTLPHREGYIAIVMPKPAD 202

Query: 885 WLKIRNLLLTLEEYKKLRDL 944
           WLK++  LL+LEE+K+LR+L
Sbjct: 203 WLKVKESLLSLEEHKRLREL 222


Top