BLASTX nr result
ID: Coptis25_contig00015973
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00015973
(1107 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283626.1| PREDICTED: ribosomal RNA small subunit methy... 102 7e-45
ref|XP_004136324.1| PREDICTED: ribosomal RNA small subunit methy... 102 1e-44
gb|EAZ21674.1| hypothetical protein OsJ_05305 [Oryza sativa Japo... 101 2e-44
ref|NP_001045831.1| Os02g0137600 [Oryza sativa Japonica Group] g... 101 2e-44
ref|XP_002451509.1| hypothetical protein SORBIDRAFT_04g003030 [S... 100 9e-44
>ref|XP_002283626.1| PREDICTED: ribosomal RNA small subunit methyltransferase H-like
[Vitis vinifera]
Length = 444
Score = 102 bits (253), Expect(3) = 7e-45
Identities = 56/94 (59%), Positives = 65/94 (69%)
Frame = +3
Query: 204 SSSKKIMNARSYGGLHSTGELVDLVRSFGVLSLEFCFTLVLLAGRKGWVKTATRVFQALR 383
S KI+ AR +GGLHSTGELVDL+R T GR+GW+KTATRVFQALR
Sbjct: 270 SLQNKIVKARLFGGLHSTGELVDLIRKT---------TPRTRGGRQGWIKTATRVFQALR 320
Query: 384 IAVNDELNKLEHALSACFDCLYFGGKVAVISIIS 485
IAVNDEL LE +L ACF+CL GG++AVIS S
Sbjct: 321 IAVNDELKTLEDSLYACFECLTPGGRLAVISFHS 354
Score = 71.6 bits (174), Expect(3) = 7e-45
Identities = 46/97 (47%), Positives = 58/97 (59%), Gaps = 8/97 (8%)
Frame = +1
Query: 475 LSFHSLEDRILKKMFLDLVNVSNGDAGEE*GVM*NFAAGHRW**GI-NVGEEEYKWYKRD 651
+SFHSLEDRI+K+ FLD++N + D E G R I N +E+ W K+
Sbjct: 350 ISFHSLEDRIVKQTFLDIINSNGEDESGEGGGQEGCGKDLR---NIRNDNDEKEAWIKQM 406
Query: 652 YSH-------KRPITPSEEEERLNQRCRSAKLKVLQK 741
KRPITPSEEEERLN+R RSAKL+V+QK
Sbjct: 407 VQGWNGTILTKRPITPSEEEERLNRRSRSAKLRVIQK 443
Score = 55.5 bits (132), Expect(3) = 7e-45
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = +1
Query: 109 QASLKAEDILYLWPEAEVGPILREYGEESNQNHLQKKL 222
QASL AEDIL WP+ EVG ILREYGEESN LQ K+
Sbjct: 238 QASLTAEDILNSWPDTEVGRILREYGEESNWRSLQNKI 275
>ref|XP_004136324.1| PREDICTED: ribosomal RNA small subunit methyltransferase H-like
[Cucumis sativus] gi|449505500|ref|XP_004162490.1|
PREDICTED: ribosomal RNA small subunit methyltransferase
H-like [Cucumis sativus]
Length = 448
Score = 102 bits (253), Expect(3) = 1e-44
Identities = 55/94 (58%), Positives = 66/94 (70%)
Frame = +3
Query: 204 SSSKKIMNARSYGGLHSTGELVDLVRSFGVLSLEFCFTLVLLAGRKGWVKTATRVFQALR 383
S KI+ ARS GGLHST +L+DL+R TL GR+GW+KTATRVFQALR
Sbjct: 281 SLQNKIVKARSQGGLHSTTQLLDLIRKS---------TLGFKGGRQGWIKTATRVFQALR 331
Query: 384 IAVNDELNKLEHALSACFDCLYFGGKVAVISIIS 485
IAVNDELN L+++L CFDCL GG++AVIS S
Sbjct: 332 IAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHS 365
Score = 71.2 bits (173), Expect(3) = 1e-44
Identities = 44/99 (44%), Positives = 57/99 (57%), Gaps = 10/99 (10%)
Frame = +1
Query: 475 LSFHSLEDRILKKMFLDLVNVS---NGDAGEE*GVM*NFAAGHRW**GINVGEEEYKWYK 645
+SFHSLEDR++K+ FLD++N + D GE +M EE +W K
Sbjct: 361 ISFHSLEDRVVKQTFLDIINPKTEGDEDGGEVTKIM----------------EENEEWIK 404
Query: 646 RDYSH-------KRPITPSEEEERLNQRCRSAKLKVLQK 741
+ KRPITPSEEEERLN+R RSAKL+V+QK
Sbjct: 405 QTVKGLKGTVLTKRPITPSEEEERLNRRSRSAKLRVIQK 443
Score = 55.1 bits (131), Expect(3) = 1e-44
Identities = 28/38 (73%), Positives = 29/38 (76%)
Frame = +1
Query: 109 QASLKAEDILYLWPEAEVGPILREYGEESNQNHLQKKL 222
QASLKAEDIL WPE EVG ILR YGEESN LQ K+
Sbjct: 249 QASLKAEDILNNWPETEVGRILRVYGEESNWYSLQNKI 286
>gb|EAZ21674.1| hypothetical protein OsJ_05305 [Oryza sativa Japonica Group]
Length = 439
Score = 101 bits (252), Expect(3) = 2e-44
Identities = 55/95 (57%), Positives = 65/95 (68%)
Frame = +3
Query: 201 ESSSKKIMNARSYGGLHSTGELVDLVRSFGVLSLEFCFTLVLLAGRKGWVKTATRVFQAL 380
+S K+I+ AR+ GGLHSTGELV L++ T GR+GW+KTATRVFQAL
Sbjct: 275 QSLQKRIVKARAMGGLHSTGELVKLIQR----------TCTSSGGRQGWIKTATRVFQAL 324
Query: 381 RIAVNDELNKLEHALSACFDCLYFGGKVAVISIIS 485
RIAVNDEL LE AL ACFDCL G++AVIS S
Sbjct: 325 RIAVNDELRTLEDALHACFDCLATDGRLAVISFHS 359
Score = 71.2 bits (173), Expect(3) = 2e-44
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Frame = +1
Query: 475 LSFHSLEDRILKKMFLDLVNVSNGDAGEE*GVM*NFAAGHRW**GINVGEEEYKWYKRDY 654
+SFHSLEDRI+K+ FL+L++ D E+ V ++ E+ W+K+
Sbjct: 355 ISFHSLEDRIVKQTFLELIHEDEIDDDEDDLV------------SADIDSEDEPWFKQRV 402
Query: 655 SHK-------RPITPSEEEERLNQRCRSAKLKVLQK 741
K RPI+PS+EEE LNQRCRSAKL+V+QK
Sbjct: 403 QGKNGTILTKRPISPSQEEEELNQRCRSAKLRVIQK 438
Score = 54.3 bits (129), Expect(3) = 2e-44
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +1
Query: 109 QASLKAEDILYLWPEAEVGPILREYGEESNQNHLQKKL 222
+A+LKAEDIL WP+ EVG ILR+YGEESN LQK++
Sbjct: 244 KATLKAEDILNSWPDLEVGRILRDYGEESNWQSLQKRI 281
>ref|NP_001045831.1| Os02g0137600 [Oryza sativa Japonica Group]
gi|42409129|dbj|BAD10379.1| putative methyltransferase
[Oryza sativa Japonica Group]
gi|42409260|dbj|BAD10523.1| putative methyltransferase
[Oryza sativa Japonica Group]
gi|113535362|dbj|BAF07745.1| Os02g0137600 [Oryza sativa
Japonica Group] gi|125538002|gb|EAY84397.1| hypothetical
protein OsI_05773 [Oryza sativa Indica Group]
Length = 436
Score = 101 bits (252), Expect(3) = 2e-44
Identities = 55/95 (57%), Positives = 65/95 (68%)
Frame = +3
Query: 201 ESSSKKIMNARSYGGLHSTGELVDLVRSFGVLSLEFCFTLVLLAGRKGWVKTATRVFQAL 380
+S K+I+ AR+ GGLHSTGELV L++ T GR+GW+KTATRVFQAL
Sbjct: 272 QSLQKRIVKARAMGGLHSTGELVKLIQR----------TCTSSGGRQGWIKTATRVFQAL 321
Query: 381 RIAVNDELNKLEHALSACFDCLYFGGKVAVISIIS 485
RIAVNDEL LE AL ACFDCL G++AVIS S
Sbjct: 322 RIAVNDELRTLEDALHACFDCLATDGRLAVISFHS 356
Score = 71.2 bits (173), Expect(3) = 2e-44
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Frame = +1
Query: 475 LSFHSLEDRILKKMFLDLVNVSNGDAGEE*GVM*NFAAGHRW**GINVGEEEYKWYKRDY 654
+SFHSLEDRI+K+ FL+L++ D E+ V ++ E+ W+K+
Sbjct: 352 ISFHSLEDRIVKQTFLELIHEDEIDDDEDDLV------------SADIDSEDEPWFKQRV 399
Query: 655 SHK-------RPITPSEEEERLNQRCRSAKLKVLQK 741
K RPI+PS+EEE LNQRCRSAKL+V+QK
Sbjct: 400 QGKNGTILTKRPISPSQEEEELNQRCRSAKLRVIQK 435
Score = 54.3 bits (129), Expect(3) = 2e-44
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +1
Query: 109 QASLKAEDILYLWPEAEVGPILREYGEESNQNHLQKKL 222
+A+LKAEDIL WP+ EVG ILR+YGEESN LQK++
Sbjct: 241 KATLKAEDILNSWPDLEVGRILRDYGEESNWQSLQKRI 278
>ref|XP_002451509.1| hypothetical protein SORBIDRAFT_04g003030 [Sorghum bicolor]
gi|241931340|gb|EES04485.1| hypothetical protein
SORBIDRAFT_04g003030 [Sorghum bicolor]
Length = 445
Score = 100 bits (249), Expect(3) = 9e-44
Identities = 53/95 (55%), Positives = 68/95 (71%)
Frame = +3
Query: 201 ESSSKKIMNARSYGGLHSTGELVDLVRSFGVLSLEFCFTLVLLAGRKGWVKTATRVFQAL 380
+S K+I+ AR+ GGLHSTG+LV L++ +S +GR+GW+KTATRVFQAL
Sbjct: 278 QSVQKQIVKARATGGLHSTGDLVKLIQRMCSIS----------SGRQGWIKTATRVFQAL 327
Query: 381 RIAVNDELNKLEHALSACFDCLYFGGKVAVISIIS 485
RIAVNDEL LE +L +CFDCL GG++AVIS S
Sbjct: 328 RIAVNDELRVLEDSLHSCFDCLATGGRLAVISFHS 362
Score = 72.0 bits (175), Expect(3) = 9e-44
Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 7/96 (7%)
Frame = +1
Query: 475 LSFHSLEDRILKKMFLDLVNVSNGDAGEE*GVM*NFAAGHRW**GINVGEEEYKWYKRDY 654
+SFHSLEDRI+KK FL+L++ G+A +E + A ++ E+ W+ +
Sbjct: 358 ISFHSLEDRIVKKTFLELIH--GGEADDEEDDKDDLAL-------TDIVNEDEPWFGQRV 408
Query: 655 SH-------KRPITPSEEEERLNQRCRSAKLKVLQK 741
KRPITPS+EEE+LNQRCRSAKL+V+QK
Sbjct: 409 QGRNGTVLTKRPITPSQEEEKLNQRCRSAKLRVIQK 444
Score = 52.8 bits (125), Expect(3) = 9e-44
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +1
Query: 109 QASLKAEDILYLWPEAEVGPILREYGEESNQNHLQKKL 222
+A+L+AEDIL WPE E+G ILREYGEESN +QK++
Sbjct: 247 KATLRAEDILNSWPEIELGRILREYGEESNWQSVQKQI 284