BLASTX nr result

ID: Coptis25_contig00015969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015969
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303275.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_002299620.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002467223.1| hypothetical protein SORBIDRAFT_01g021605 [S...    64   1e-08
ref|XP_003562046.1| PREDICTED: uncharacterized protein LOC100825...    59   4e-07
gb|EEE58366.1| hypothetical protein OsJ_09503 [Oryza sativa Japo...    58   9e-07

>ref|XP_002303275.1| predicted protein [Populus trichocarpa] gi|222840707|gb|EEE78254.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
 Frame = -3

Query: 204 CGLVWCGEGTCIVAGDAGHICQCNEGADHLFGNKDLPCFKECV--FGADCSNFGLGNQAP 31
           C LVWCG+GTC+  G  GHIC+CNE + +LF      CFK+C+   GADCS+ GLG   P
Sbjct: 107 CNLVWCGDGTCVANG-TGHICRCNEDSANLFNMTGFACFKKCMGYLGADCSDVGLGRSPP 165

Query: 30  PPPSSA 13
            P SSA
Sbjct: 166 SPASSA 171


>ref|XP_002299620.1| predicted protein [Populus trichocarpa] gi|222846878|gb|EEE84425.1|
           predicted protein [Populus trichocarpa]
          Length = 214

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 33/60 (55%), Positives = 39/60 (65%)
 Frame = -3

Query: 204 CGLVWCGEGTCIVAGDAGHICQCNEGADHLFGNKDLPCFKECVFGADCSNFGLGNQAPPP 25
           C LVWCG+GTC+  G  GHICQCN+G+ +L    DL CFK+C FG DC    LG    PP
Sbjct: 100 CNLVWCGDGTCVANG-TGHICQCNQGSSNLLNETDLACFKQCSFGEDCIGLLLGMLLSPP 158


>ref|XP_002467223.1| hypothetical protein SORBIDRAFT_01g021605 [Sorghum bicolor]
           gi|241921077|gb|EER94221.1| hypothetical protein
           SORBIDRAFT_01g021605 [Sorghum bicolor]
          Length = 188

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = -3

Query: 204 CGLVWCGEGTCIVAGDAGHICQCNEGADHLFGNKDLPCFKECVFGADCSNFGLGNQ-APP 28
           C +V CG G C       + C+C+ G+ +L     LPC K C FGADCS  G+  Q APP
Sbjct: 117 CLVVNCGSGDCKKGDGLSYTCECHPGSSNLLNLNMLPCMKNCSFGADCSKLGINPQGAPP 176

Query: 27  PPSSANR 7
           PP   +R
Sbjct: 177 PPPPPSR 183


>ref|XP_003562046.1| PREDICTED: uncharacterized protein LOC100825787 [Brachypodium
           distachyon]
          Length = 223

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
 Frame = -3

Query: 204 CGLVWCGEG-TCIVAGDAGHICQCNEGADHLFGNKDLPCFKECVFGADCSNFGL----GN 40
           C + +CG G TC       + C+C +G  +L     +PCF+EC  GADC+  G+     +
Sbjct: 120 CEVAYCGSGGTCKNGTGLSYHCECKQGFSNLLNMTTMPCFQECSIGADCAGIGILPSTNS 179

Query: 39  QAPPPP---SSANRN 4
           Q PPPP   +SA+ N
Sbjct: 180 QTPPPPPGSASASNN 194


>gb|EEE58366.1| hypothetical protein OsJ_09503 [Oryza sativa Japonica Group]
          Length = 238

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
 Frame = -3

Query: 204 CGLVWCGEG-TCIVAGDAGHICQCNEGADHLFGNKDLPCFKECVFGADCSNFGL-----G 43
           C L +CG G TC       + C+C+EG  +L     +PCF+ C  GADC++ GL      
Sbjct: 128 CQLAYCGSGGTCKNGTGLSYHCECSEGFSNLLNITTMPCFQNCSIGADCASIGLSPSSNS 187

Query: 42  NQAPPPPSSA 13
           + +P PP SA
Sbjct: 188 SSSPAPPGSA 197


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