BLASTX nr result

ID: Coptis25_contig00015967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015967
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242036.1| uncharacterized protein LOC100793642 [Glycin...    59   5e-07
gb|ACJ83453.1| unknown [Medicago truncatula]                           59   5e-07
gb|AAQ62584.1| putative Rab geranylgeranyl transferase type II b...    59   5e-07
ref|XP_002319501.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_003524939.1| PREDICTED: geranylgeranyl transferase type-2...    56   3e-06

>ref|NP_001242036.1| uncharacterized protein LOC100793642 [Glycine max]
           gi|255635594|gb|ACU18147.1| unknown [Glycine max]
          Length = 317

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/31 (87%), Positives = 28/31 (90%)
 Frame = +2

Query: 2   GLSLLEYPGLKTIDPAYALPVDVVNNIFFGK 94
           GLSLLEYPGLK +DPAYALPVDVVN IFF K
Sbjct: 283 GLSLLEYPGLKPVDPAYALPVDVVNRIFFTK 313


>gb|ACJ83453.1| unknown [Medicago truncatula]
          Length = 63

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/31 (87%), Positives = 28/31 (90%)
 Frame = +2

Query: 2   GLSLLEYPGLKTIDPAYALPVDVVNNIFFGK 94
           GLSLLEYPG+K IDPAYALPVDVVN IFF K
Sbjct: 33  GLSLLEYPGVKPIDPAYALPVDVVNRIFFSK 63


>gb|AAQ62584.1| putative Rab geranylgeranyl transferase type II beta subunit
           [Glycine max]
          Length = 317

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/31 (87%), Positives = 28/31 (90%)
 Frame = +2

Query: 2   GLSLLEYPGLKTIDPAYALPVDVVNNIFFGK 94
           GLSLLEYPGLK +DPAYALPVDVVN IFF K
Sbjct: 283 GLSLLEYPGLKPVDPAYALPVDVVNRIFFTK 313


>ref|XP_002319501.1| predicted protein [Populus trichocarpa] gi|222857877|gb|EEE95424.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/31 (87%), Positives = 28/31 (90%)
 Frame = +2

Query: 2   GLSLLEYPGLKTIDPAYALPVDVVNNIFFGK 94
           GLSLLEYPGLK IDPA+ALPVDVVN IFF K
Sbjct: 283 GLSLLEYPGLKAIDPAHALPVDVVNRIFFQK 313


>ref|XP_003524939.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta-like
           [Glycine max]
          Length = 320

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/31 (83%), Positives = 27/31 (87%)
 Frame = +2

Query: 2   GLSLLEYPGLKTIDPAYALPVDVVNNIFFGK 94
           GLSLLEYPGLK +DPAYALPVDVVN I F K
Sbjct: 290 GLSLLEYPGLKPVDPAYALPVDVVNRIIFTK 320


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