BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015955
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37854.3| unnamed protein product [Vitis vinifera]              147   7e-34
ref|XP_002279715.1| PREDICTED: probable 26S proteasome non-ATPas...   147   7e-34
dbj|BAA02696.1| 21D7 antigen [Daucus carota]                          147   1e-33
sp|Q06364.2|PSMD3_DAUCA RecName: Full=Probable 26S proteasome no...   147   1e-33
ref|XP_002285893.1| PREDICTED: probable 26S proteasome non-ATPas...   143   2e-32

>emb|CBI37854.3| unnamed protein product [Vitis vinifera]
          Length = 436

 Score =  147 bits (372), Expect = 7e-34
 Identities = 81/121 (66%), Positives = 92/121 (76%), Gaps = 3/121 (2%)
 Frame = -2

Query: 356 MTQDVEMKEV-AXXXXXXXXXXXTLQQLKEIASLIENGTYEKEVRKIVRAIRFTIVLRKK 180
           MTQDVEMKE+ A           TLQ LKEIASLIE+  Y +EVR+IVRAIR T++LR+K
Sbjct: 1   MTQDVEMKELPAPSNSVTSTTPSTLQHLKEIASLIESSAYAREVRRIVRAIRLTMILRRK 60

Query: 179 LKPSLLHAFLNYALIPGSEAHTRLSAYLPKDDEQDMEVDTATSATS--VKQSLPELEIYC 6
           LK ++L  FLNYAL PGSE HTRLS+YLPK+DE DMEVDTATSAT    K  LPELEIYC
Sbjct: 61  LKATVLSGFLNYALNPGSEVHTRLSSYLPKEDEHDMEVDTATSATQTPAKHPLPELEIYC 120

Query: 5   Y 3
           Y
Sbjct: 121 Y 121


>ref|XP_002279715.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3
           [Vitis vinifera]
          Length = 487

 Score =  147 bits (372), Expect = 7e-34
 Identities = 81/121 (66%), Positives = 92/121 (76%), Gaps = 3/121 (2%)
 Frame = -2

Query: 356 MTQDVEMKEV-AXXXXXXXXXXXTLQQLKEIASLIENGTYEKEVRKIVRAIRFTIVLRKK 180
           MTQDVEMKE+ A           TLQ LKEIASLIE+  Y +EVR+IVRAIR T++LR+K
Sbjct: 1   MTQDVEMKELPAPSNSVTSTTPSTLQHLKEIASLIESSAYAREVRRIVRAIRLTMILRRK 60

Query: 179 LKPSLLHAFLNYALIPGSEAHTRLSAYLPKDDEQDMEVDTATSATS--VKQSLPELEIYC 6
           LK ++L  FLNYAL PGSE HTRLS+YLPK+DE DMEVDTATSAT    K  LPELEIYC
Sbjct: 61  LKATVLSGFLNYALNPGSEVHTRLSSYLPKEDEHDMEVDTATSATQTPAKHPLPELEIYC 120

Query: 5   Y 3
           Y
Sbjct: 121 Y 121


>dbj|BAA02696.1| 21D7 antigen [Daucus carota]
          Length = 488

 Score =  147 bits (370), Expect = 1e-33
 Identities = 79/123 (64%), Positives = 94/123 (76%), Gaps = 5/123 (4%)
 Frame = -2

Query: 356 MTQDVEMKEV---AXXXXXXXXXXXTLQQLKEIASLIENGTYEKEVRKIVRAIRFTIVLR 186
           MTQDVEMKEV   A           TLQ LKEIASLIE+G Y +EVR+I+RA+R TI LR
Sbjct: 1   MTQDVEMKEVPAPAPSNSVTAATPSTLQHLKEIASLIESGAYAREVRRILRAVRLTIALR 60

Query: 185 KKLKPSLLHAFLNYALIPGSEAHTRLSAYLPKDDEQDMEVDTATSATS--VKQSLPELEI 12
           KKL  S+++AFLN++L+PGSE H RL++YLPK+DE DMEVDTA SAT+   K SLPELEI
Sbjct: 61  KKLNASVVNAFLNFSLVPGSEVHARLASYLPKEDEHDMEVDTAMSATTTLAKHSLPELEI 120

Query: 11  YCY 3
           YCY
Sbjct: 121 YCY 123


>sp|Q06364.2|PSMD3_DAUCA RecName: Full=Probable 26S proteasome non-ATPase regulatory subunit
           3; Short=26S proteasome subunit S3; AltName: Full=26S
           proteasome regulatory subunit RPN3; AltName:
           Full=Nuclear antigen 21D7
          Length = 489

 Score =  147 bits (370), Expect = 1e-33
 Identities = 79/123 (64%), Positives = 94/123 (76%), Gaps = 5/123 (4%)
 Frame = -2

Query: 356 MTQDVEMKEV---AXXXXXXXXXXXTLQQLKEIASLIENGTYEKEVRKIVRAIRFTIVLR 186
           MTQDVEMKEV   A           TLQ LKEIASLIE+G Y +EVR+I+RA+R TI LR
Sbjct: 1   MTQDVEMKEVPAPAPSNSVTAATPSTLQHLKEIASLIESGAYAREVRRILRAVRLTIALR 60

Query: 185 KKLKPSLLHAFLNYALIPGSEAHTRLSAYLPKDDEQDMEVDTATSATS--VKQSLPELEI 12
           KKL  S+++AFLN++L+PGSE H RL++YLPK+DE DMEVDTA SAT+   K SLPELEI
Sbjct: 61  KKLNASVVNAFLNFSLVPGSEVHARLASYLPKEDEHDMEVDTAMSATTTLAKHSLPELEI 120

Query: 11  YCY 3
           YCY
Sbjct: 121 YCY 123


>ref|XP_002285893.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3
           [Vitis vinifera] gi|302141730|emb|CBI18933.3| unnamed
           protein product [Vitis vinifera]
          Length = 487

 Score =  143 bits (360), Expect = 2e-32
 Identities = 80/121 (66%), Positives = 92/121 (76%), Gaps = 3/121 (2%)
 Frame = -2

Query: 356 MTQDVEMKE-VAXXXXXXXXXXXTLQQLKEIASLIENGTYEKEVRKIVRAIRFTIVLRKK 180
           MTQDVEMK+  A           TL QLKEIASLIE G+Y KEVR+IVRAIR T+ LR+K
Sbjct: 1   MTQDVEMKDRTAPSNSVSSTGPSTLHQLKEIASLIETGSYTKEVRRIVRAIRLTMALRRK 60

Query: 179 LKPSLLHAFLNYALIPGSEAHTRLSAYLPKDDEQDMEVDTATSA--TSVKQSLPELEIYC 6
           LK  +L AFL++AL+P SEAH+RLSAYLPK+DE DMEVDTATSA    VK  +PELEIYC
Sbjct: 61  LKVPVLSAFLDFALVPVSEAHSRLSAYLPKEDEHDMEVDTATSADQAPVKHLVPELEIYC 120

Query: 5   Y 3
           Y
Sbjct: 121 Y 121