BLASTX nr result

ID: Coptis25_contig00015954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015954
         (1815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23675.3| unnamed protein product [Vitis vinifera]              252   3e-64
ref|XP_002528824.1| conserved hypothetical protein [Ricinus comm...   251   4e-64
ref|XP_002281751.1| PREDICTED: uncharacterized protein LOC100258...   246   1e-62
ref|XP_002868293.1| hypothetical protein ARALYDRAFT_493476 [Arab...   236   1e-59
ref|XP_002311684.1| predicted protein [Populus trichocarpa] gi|2...   236   1e-59

>emb|CBI23675.3| unnamed protein product [Vitis vinifera]
          Length = 910

 Score =  252 bits (643), Expect = 3e-64
 Identities = 195/535 (36%), Positives = 244/535 (45%), Gaps = 12/535 (2%)
 Frame = +1

Query: 247  KENVRWXXXXXXXXXXXXXXDFTRILSDRMSSKLSKGVVQNCGKLEKLQSQKGNLVGR-- 420
            +  VRW              DFTR+LSD    K S+  +    K+   +  +    GR  
Sbjct: 83   ESRVRWSTSSVPRGRSSSPSDFTRLLSDLRKDKGSRVSLDRREKVSGGERDRSVSRGRVS 142

Query: 421  ----SKFECGGIGVSDGKSKVEIFIEKNVENGVIGSRRSSTSKFRDNKNDEKGVNGYRMS 588
                 + E    G SD +S V+  +  N E   +G    S  KFR       G       
Sbjct: 143  RVSVDRCENSSGGESD-RSAVKPSVCSNSEGPKLGQNADSNVKFRGGSRVTDG------G 195

Query: 589  KSIEVFTDKNDEKVGS-GKSIGKHXXXXXXXXXXXXXXXXXXXXXXKDKCYVDQKARNAA 765
            +    F  K+D+ VG  GK +                                QK+ NA 
Sbjct: 196  REENFFVSKSDDVVGKVGKGVDSSCRGSG------------------------QKSLNAM 231

Query: 766  VGSESCKQKSGSDLESKVAVREGGLGTSVKVVKGKVLESQKESVDSEKHDEVRVGNKYSS 945
              SE  K+K  S+          G+G                          R GNKY S
Sbjct: 232  KISEMSKEKGASE----------GVGG-------------------------RSGNKYPS 256

Query: 946  KLHEKLAFLEGKVKRIASDIMKTKEMLDMNNPDTSKTIISDIQVKISGIEKAMVNVVEDK 1125
            KLHEKLAFLEGKVKRIASDI +TKEML+MNNPDTSK I+SDIQ KI GIEKAM +V  D 
Sbjct: 257  KLHEKLAFLEGKVKRIASDIKRTKEMLEMNNPDTSKVILSDIQDKICGIEKAMGHVASDS 316

Query: 1126 QKNLDLPEVVDQRFSCLETSKSKQVGGVKPSVRDLNSEELEARLFPHHKXXXXXXXXXXX 1305
              N                        V  SV+ LN EELEARLFPHH+           
Sbjct: 317  DANA--------------------ADHVTSSVKGLNCEELEARLFPHHRLIRNRTSMKAS 356

Query: 1306 XXXXXXXXXXXXXXX---MVEDMVLSPIDENSIAQEFLESLNKKASKVSERNEHADMQFH 1476
                                E+  LSPIDEN IA EFL SL++  SKV+ R+ H   +F 
Sbjct: 357  LGSSQNFQSCNVESTGQLKPEEKALSPIDENPIAVEFLASLSEDNSKVTMRDRHVGSEFC 416

Query: 1477 EVQETDGPAASAAKENYNKVTVRNIYAEIKLXXXXXXXXXXXXXXNRPETEIEEM--EDS 1650
            EV+E DG   SA+++  N++  +    E+ L              NR    I E   E++
Sbjct: 417  EVKEMDGATTSASQDCENRIMGKP-NVELILTTDETLDDEFADQENRQAMVISEETEEET 475

Query: 1651 SMDQLNEIGQKTSTGGWFVSEGESVLLAHDDGSCTFYDITNSEVKAEYNPPSVVS 1815
             +  LNEIG+KT+TGGWFVSEGES+LLAHDDGSC+F+DI NSE KAEY PPS +S
Sbjct: 476  CVYLLNEIGRKTTTGGWFVSEGESILLAHDDGSCSFHDIANSEEKAEYKPPSGLS 530


>ref|XP_002528824.1| conserved hypothetical protein [Ricinus communis]
            gi|223531736|gb|EEF33558.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 919

 Score =  251 bits (641), Expect = 4e-64
 Identities = 166/364 (45%), Positives = 210/364 (57%), Gaps = 5/364 (1%)
 Frame = +1

Query: 739  VDQKARNAAVGSESCKQKSGSDLESKVAVREGGLGTSVKVVKGKVLESQKESVDSEKHDE 918
            +D K        + C   SGSD++   + +E    TS    K KV E+ KE    E+   
Sbjct: 195  LDSKVLKGVKLDKLCADNSGSDIKVD-SFKEPSDNTS----KIKVSENIKEKGLIEEGTG 249

Query: 919  VRVGNKYSSKLHEKLAFLEGKVKRIASDIMKTKEMLDMNNPDTSKTIISDIQVKISGIEK 1098
             ++G KY SKLHEKLAFLEGKVKRIASDI +TKEMLDMNNPD SK ++SDIQ KISGIEK
Sbjct: 250  NKIGVKYPSKLHEKLAFLEGKVKRIASDIKRTKEMLDMNNPDASKVVLSDIQDKISGIEK 309

Query: 1099 AMVNVVEDKQKNLDLPEVVDQRFSCLETSKSKQVGGVKPSVRDLNSEELEARLFPHHK-- 1272
            A+ NV           E  +   + +  +K ++V  VK S++ LN+EELEARL PHHK  
Sbjct: 310  AIGNVGGGDSSRTGGNEGGEN--NVVGKNKDEKVDQVKGSIKGLNNEELEARLLPHHKLL 367

Query: 1273 --XXXXXXXXXXXXXXXXXXXXXXXXXXMVEDMVLSPIDENSIAQEFLESLNKKASKVSE 1446
                                         V++ +LSPI+EN IA EFL SLNK+ +KV+ 
Sbjct: 368  RNRTLLKEPSGSSQGCEDSIVPESTSESKVKEKLLSPIEENPIALEFLASLNKEDTKVTL 427

Query: 1447 RNEHADMQFHEVQETDGPAASAAKENYNKVTVRNIYAEIKLXXXXXXXXXXXXXXNRPET 1626
            R    D +  EV+ETD  AA + +++ + ++      E+ L              NRP  
Sbjct: 428  RETTVDFENREVKETD-DAAPSGRQDSSSMSYGKREEEVVL-TTDETFDEFDDQENRPVL 485

Query: 1627 EI-EEMEDSSMDQLNEIGQKTSTGGWFVSEGESVLLAHDDGSCTFYDITNSEVKAEYNPP 1803
             I EE ED+ + Q+NEIG K+STGGWFVSEGESVLLAHDDGSCTFYDI N E KA Y PP
Sbjct: 486  VIGEETEDTCVYQVNEIGTKSSTGGWFVSEGESVLLAHDDGSCTFYDIANCEEKAVYKPP 545

Query: 1804 SVVS 1815
              VS
Sbjct: 546  VGVS 549


>ref|XP_002281751.1| PREDICTED: uncharacterized protein LOC100258054 [Vitis vinifera]
          Length = 986

 Score =  246 bits (629), Expect = 1e-62
 Identities = 202/573 (35%), Positives = 263/573 (45%), Gaps = 50/573 (8%)
 Frame = +1

Query: 247  KENVRWXXXXXXXXXXXXXXDFTRILSDRMSSKLSKGVVQNCGKLEKLQSQKGNLVGR-- 420
            +  VRW              DFTR+LSD    K S+  +    K+   +  +    GR  
Sbjct: 83   ESRVRWSTSSVPRGRSSSPSDFTRLLSDLRKDKGSRVSLDRREKVSGGERDRSVSRGRVS 142

Query: 421  ----SKFECGGIGVSDGKSKVEIFIEKNVENGVIGSRRSSTSKFRDN--KNDEKGVNGYR 582
                 + E    G SD  +         V  GV GSR      FRD+  K +E+ VNG R
Sbjct: 143  RVSVDRCENSSGGESDRSAG-------KVGKGVNGSRVLKKG-FRDSSPKVNERSVNGLR 194

Query: 583  M------SKSIEVFTDKNDEKVGSGKSIGKHXXXXXXXXXXXXXXXXXXXXXXKDKCYVD 744
            +      S++++V   KN +                                  ++  + 
Sbjct: 195  IVPGCNDSENLDVNLKKNGDIA--------EKFELKLDERKKNSNGVVAIDNFMEEVNLR 246

Query: 745  QKARNAAVGSESCKQKSGSDLESKVAVREGG-------------------LGTSVKVVKG 867
              +   +V S S   K G + +S V  R G                    +G   K V  
Sbjct: 247  LNSVKPSVCSNSEGPKLGQNADSNVKFRGGSRVTDGGREENFFVSKSDDVVGKVGKGVDS 306

Query: 868  KVLESQKESVDSEKHDEV------------RVGNKYSSKLHEKLAFLEGKVKRIASDIMK 1011
                S ++S+++ K  E+            R GNKY SKLHEKLAFLEGKVKRIASDI +
Sbjct: 307  SCRGSGQKSLNAMKISEMSKEKGASEGVGGRSGNKYPSKLHEKLAFLEGKVKRIASDIKR 366

Query: 1012 TKEMLDMNNPDTSKTIISDIQVKISGIEKAMVNVVEDKQKNLDLPEVVDQRFSCLETSKS 1191
            TKEML+MNNPDTSK I+SDIQ KI GIEKAM +V  D   N                   
Sbjct: 367  TKEMLEMNNPDTSKVILSDIQDKICGIEKAMGHVASDSDANA------------------ 408

Query: 1192 KQVGGVKPSVRDLNSEELEARLFPHHKXXXXXXXXXXXXXXXXXXXXXXXXXX---MVED 1362
                 V  SV+ LN EELEARLFPHH+                               E+
Sbjct: 409  --ADHVTSSVKGLNCEELEARLFPHHRLIRNRTSMKASLGSSQNFQSCNVESTGQLKPEE 466

Query: 1363 MVLSPIDENSIAQEFLESLNKKASKVSERNEHADMQFHEVQETDGPAASAAKENYNKVTV 1542
              LSPIDEN IA EFL SL++  SKV+ R+ H   +F EV+E DG   SA+++  N++  
Sbjct: 467  KALSPIDENPIAVEFLASLSEDNSKVTMRDRHVGSEFCEVKEMDGATTSASQDCENRIMG 526

Query: 1543 RNIYAEIKLXXXXXXXXXXXXXXNRPETEIEEM--EDSSMDQLNEIGQKTSTGGWFVSEG 1716
            +    E+ L              NR    I E   E++ +  LNEIG+KT+TGGWFVSEG
Sbjct: 527  KP-NVELILTTDETLDDEFADQENRQAMVISEETEEETCVYLLNEIGRKTTTGGWFVSEG 585

Query: 1717 ESVLLAHDDGSCTFYDITNSEVKAEYNPPSVVS 1815
            ES+LLAHDDGSC+F+DI NSE KAEY PPS +S
Sbjct: 586  ESILLAHDDGSCSFHDIANSEEKAEYKPPSGLS 618


>ref|XP_002868293.1| hypothetical protein ARALYDRAFT_493476 [Arabidopsis lyrata subsp.
            lyrata] gi|297314129|gb|EFH44552.1| hypothetical protein
            ARALYDRAFT_493476 [Arabidopsis lyrata subsp. lyrata]
          Length = 896

 Score =  236 bits (602), Expect = 1e-59
 Identities = 153/366 (41%), Positives = 205/366 (56%), Gaps = 7/366 (1%)
 Frame = +1

Query: 739  VDQKARNAAVGSESCKQKSGSDLESKVAVREGGLGTSVKVVK------GKVLESQKESVD 900
            +     +A VGS    +KS   L+S   + + G GTSV + +      GK +E  KE   
Sbjct: 183  ISDPKEHALVGSG---EKSAVVLKSDCKIEKIGKGTSVALRRKSLDNGGKAMEVSKEIRG 239

Query: 901  SEKHDEVRVGNKYSSKLHEKLAFLEGKVKRIASDIMKTKEMLDMNNPDTSKTIISDIQVK 1080
            +E         KY SKLHEKLAFLEGKVK+IASDI KTK+MLD+NNPD+SK IISDIQ K
Sbjct: 240  NEGSSNSAA--KYPSKLHEKLAFLEGKVKKIASDIKKTKDMLDLNNPDSSKVIISDIQQK 297

Query: 1081 ISGIEKAMVNVVEDKQKNLDLPEVVDQRFSCLETSKSKQVGGVKPSVRDLNSEELEARLF 1260
            I+GIEK+M +V++  +KN                 K+ QV   K  V+ LN EELE RLF
Sbjct: 298  ITGIEKSMSHVIDGPEKN-----------------KTTQVTKAKTLVKGLNKEELEDRLF 340

Query: 1261 PHHKXXXXXXXXXXXXXXXXXXXXXXXXXXM-VEDMVLSPIDENSIAQEFLESLNKKASK 1437
            PH +                          + VE+   +P++EN IA EFL SL+K+  K
Sbjct: 341  PHQRLLRSRTQSKTSSHVSKGHDSVEPNKAVNVEEKPSAPVEENVIALEFLASLDKE--K 398

Query: 1438 VSERNEHADMQFHEVQETDGPAASAAKENYNKVTVRNIYAEIKLXXXXXXXXXXXXXXNR 1617
            V+  ++   ++  EVQE D    S   +    V + +   EI                NR
Sbjct: 399  VTFMSDQNALENLEVQEMDTEEPSKENDVSKDVNLTSNLNEI--LRANEALEEIDDEENR 456

Query: 1618 PETEIEEMEDSSMDQLNEIGQKTSTGGWFVSEGESVLLAHDDGSCTFYDITNSEVKAEYN 1797
             E E+EE+++  M QLN+IG +TSTGGWFVSEGE+V+LAHDDGSC++YD+ NSEVK+ Y+
Sbjct: 457  EEMELEEIDEGCMYQLNDIGSRTSTGGWFVSEGEAVILAHDDGSCSYYDVANSEVKSVYS 516

Query: 1798 PPSVVS 1815
            PP  +S
Sbjct: 517  PPDGIS 522


>ref|XP_002311684.1| predicted protein [Populus trichocarpa] gi|222851504|gb|EEE89051.1|
            predicted protein [Populus trichocarpa]
          Length = 925

 Score =  236 bits (602), Expect = 1e-59
 Identities = 158/363 (43%), Positives = 202/363 (55%), Gaps = 4/363 (1%)
 Frame = +1

Query: 739  VDQKARNAAVGSESCKQKSGSDLESKVAVREGGLGTSVKVVKGKVLESQKESVDSEKHDE 918
            +D KA N     +  ++KS  + +S  + RE    +S K   GKVLE+ K+   S++   
Sbjct: 190  LDSKAANVCKFDKLYEEKSEPEFKSD-SFRESSEKSSAK---GKVLENLKDKGLSDEGSG 245

Query: 919  VRVGNKYSSKLHEKLAFLEGKVKRIASDIMKTKEMLDMNNPDTSKTIISDIQVKISGIEK 1098
             +VG KY SKLH+KLAFLEGKVKRIASDI KTKE+LDMNNPD SK I+SDIQ KISGIEK
Sbjct: 246  SKVGVKYPSKLHDKLAFLEGKVKRIASDIKKTKELLDMNNPDASKVILSDIQDKISGIEK 305

Query: 1099 AMVNVV---EDKQKNLDLPEVVDQRFSCLETSKSKQVGGVKPSVRDLNSEELEARLFPHH 1269
            AM NV      +    D    +      +E S+S++V  VK SV+ LN+EELE RLFPHH
Sbjct: 306  AMGNVAVTGTSRSGGNDTGTAM-----VVEKSESEKVEDVKSSVKGLNTEELEERLFPHH 360

Query: 1270 KXXXXXXXXXXXXXXXXXXXXXXXXXXMVEDMVLSPIDENSIAQEFLESLNKKASKVSER 1449
            K                           V +    PI+EN  A E L SL K+  KV+ R
Sbjct: 361  K--LLRNRTSLKAPIASCQSHESGCELKVGEKFSGPIEENPKAFELLYSLGKEDKKVTMR 418

Query: 1450 NEHADMQFHEVQETDGPAASAAKENYNKVTVRNIYAEIKLXXXXXXXXXXXXXXNRPETE 1629
            +    ++  EVQE    + S  +++ N   + N+  E  +              N     
Sbjct: 419  DAKVGLESFEVQEMGDGSVSGKQDSSN---MFNLKCEDLVLTTDETLDEFDDQENGNTIM 475

Query: 1630 I-EEMEDSSMDQLNEIGQKTSTGGWFVSEGESVLLAHDDGSCTFYDITNSEVKAEYNPPS 1806
            I EE ED+ + ++ EIG K STGGWFVSEGES+LL HDDGSC+FYDI N E KA Y PP 
Sbjct: 476  IGEETEDTCVYEVKEIGTKNSTGGWFVSEGESILLTHDDGSCSFYDIANCEEKAVYKPPG 535

Query: 1807 VVS 1815
             VS
Sbjct: 536  GVS 538


Top