BLASTX nr result

ID: Coptis25_contig00015944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015944
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321517.1| predicted protein [Populus trichocarpa] gi|2...   303   3e-80
ref|XP_002530476.1| down syndrome critical region protein, putat...   301   2e-79
ref|XP_003534139.1| PREDICTED: Down syndrome critical region pro...   299   6e-79
ref|XP_002278791.1| PREDICTED: Down syndrome critical region pro...   299   6e-79
emb|CBI15584.3| unnamed protein product [Vitis vinifera]              296   5e-78

>ref|XP_002321517.1| predicted protein [Populus trichocarpa] gi|222868513|gb|EEF05644.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score =  303 bits (777), Expect = 3e-80
 Identities = 151/191 (79%), Positives = 170/191 (89%)
 Frame = -3

Query: 951 RGYLHKPISAMVEFIIESKNSNLPKAPVSPEMVSFYITQDTQRHPLLPELFSGGFRVAGK 772
           RGYL+K +SA +E I+ES  ++L + PVSPEM  FYITQDTQRHPLLPE+ SGGFRV G+
Sbjct: 129 RGYLYKSLSATMEVIVESDKADLLERPVSPEMAIFYITQDTQRHPLLPEIKSGGFRVTGR 188

Query: 771 IITQCSLLDPLSGELTVEASAVPINSIDIHILRIESILVGEKIVTETSLIQTTQIADGDV 592
           + T CSLLDP+SGELTVE SAVPI+SIDIH+LR+ESIL+GEKIVTETSLIQTTQIADGDV
Sbjct: 189 MSTLCSLLDPISGELTVETSAVPISSIDIHLLRVESILMGEKIVTETSLIQTTQIADGDV 248

Query: 591 CRSMTLPIYVIFPRLLTCPTVLAGPFSIEFQVSIVISFQSELSKLHPKYDPRIPRLWLAM 412
           CR++TLPIYVI PRLLTCP+V AGPFSIEF+VSIVISFQSELSKLH K DPR PRLWLAM
Sbjct: 249 CRNLTLPIYVILPRLLTCPSVFAGPFSIEFKVSIVISFQSELSKLHKKSDPRTPRLWLAM 308

Query: 411 ETLPLRLFRTR 379
           ETLPL L RTR
Sbjct: 309 ETLPLELVRTR 319


>ref|XP_002530476.1| down syndrome critical region protein, putative [Ricinus communis]
           gi|223529973|gb|EEF31899.1| down syndrome critical
           region protein, putative [Ricinus communis]
          Length = 272

 Score =  301 bits (770), Expect = 2e-79
 Identities = 150/191 (78%), Positives = 167/191 (87%)
 Frame = -3

Query: 951 RGYLHKPISAMVEFIIESKNSNLPKAPVSPEMVSFYITQDTQRHPLLPELFSGGFRVAGK 772
           RGYLHK +S  +EFI+ES   +L + PVSPEM  FYITQDTQRHPLLPEL SGGFRV G+
Sbjct: 82  RGYLHKSLSTTMEFIVESDKVDLLERPVSPEMAIFYITQDTQRHPLLPELKSGGFRVTGR 141

Query: 771 IITQCSLLDPLSGELTVEASAVPINSIDIHILRIESILVGEKIVTETSLIQTTQIADGDV 592
           I TQCSLLDP+SGEL VE SAV + SIDIH+LR+ESIL+GEKIVTETSLIQTTQIADGDV
Sbjct: 142 ISTQCSLLDPISGELIVERSAVSLRSIDIHLLRVESILLGEKIVTETSLIQTTQIADGDV 201

Query: 591 CRSMTLPIYVIFPRLLTCPTVLAGPFSIEFQVSIVISFQSELSKLHPKYDPRIPRLWLAM 412
           CR++T PIYVI PRLLTCPTVLAGPFSIEF+VSIVISFQSELS+LH K DPR PRLWLAM
Sbjct: 202 CRNVTFPIYVILPRLLTCPTVLAGPFSIEFKVSIVISFQSELSRLHTKSDPRTPRLWLAM 261

Query: 411 ETLPLRLFRTR 379
           ETLPL L R++
Sbjct: 262 ETLPLELVRSK 272


>ref|XP_003534139.1| PREDICTED: Down syndrome critical region protein 3 homolog [Glycine
           max]
          Length = 316

 Score =  299 bits (766), Expect = 6e-79
 Identities = 147/191 (76%), Positives = 167/191 (87%)
 Frame = -3

Query: 951 RGYLHKPISAMVEFIIESKNSNLPKAPVSPEMVSFYITQDTQRHPLLPELFSGGFRVAGK 772
           RGYLHK +SA +E I+ES  ++L + P+SPEM  FYITQDTQRHPLLPEL SGGFRV GK
Sbjct: 126 RGYLHKSLSATMELIVESDKADLLQRPLSPEMAIFYITQDTQRHPLLPELKSGGFRVTGK 185

Query: 771 IITQCSLLDPLSGELTVEASAVPINSIDIHILRIESILVGEKIVTETSLIQTTQIADGDV 592
           I TQCSL  P+SGELTVE SAVPI+SID+ + R+ESIL+GEKIVTETSL+QTTQIADGDV
Sbjct: 186 ICTQCSLSGPISGELTVETSAVPIHSIDLQLFRVESILLGEKIVTETSLVQTTQIADGDV 245

Query: 591 CRSMTLPIYVIFPRLLTCPTVLAGPFSIEFQVSIVISFQSELSKLHPKYDPRIPRLWLAM 412
           CR+MTLPIYVI PRLLTCPT LAGPFS+EF+V+IVISFQSELSKLH K DP+ PRLWLAM
Sbjct: 246 CRNMTLPIYVIVPRLLTCPTTLAGPFSVEFKVAIVISFQSELSKLHKKSDPKTPRLWLAM 305

Query: 411 ETLPLRLFRTR 379
           ETLPL L RT+
Sbjct: 306 ETLPLELIRTK 316


>ref|XP_002278791.1| PREDICTED: Down syndrome critical region protein 3 homolog [Vitis
           vinifera]
          Length = 314

 Score =  299 bits (766), Expect = 6e-79
 Identities = 147/191 (76%), Positives = 170/191 (89%)
 Frame = -3

Query: 951 RGYLHKPISAMVEFIIESKNSNLPKAPVSPEMVSFYITQDTQRHPLLPELFSGGFRVAGK 772
           RGYL+K +SA +EFII+S  +NL + PV PEMV FYITQDTQRHPLLPEL SGGFRV GK
Sbjct: 124 RGYLYKSLSATMEFIIDSDKANLFEPPVPPEMVIFYITQDTQRHPLLPELRSGGFRVTGK 183

Query: 771 IITQCSLLDPLSGELTVEASAVPINSIDIHILRIESILVGEKIVTETSLIQTTQIADGDV 592
           + +QCSLLDP+SGEL VEASAVPI+SID+ + R+ESILVGEKIVTE+SLIQTTQIADGDV
Sbjct: 184 VSSQCSLLDPISGELIVEASAVPIHSIDLQLHRVESILVGEKIVTESSLIQTTQIADGDV 243

Query: 591 CRSMTLPIYVIFPRLLTCPTVLAGPFSIEFQVSIVISFQSELSKLHPKYDPRIPRLWLAM 412
           CR +T+PIYVI PRLLTCPTVLAGPFSIEF++SIVI+F+SEL KLHPK DP+ PRLWLAM
Sbjct: 244 CRRVTIPIYVILPRLLTCPTVLAGPFSIEFKISIVITFESELVKLHPKSDPKTPRLWLAM 303

Query: 411 ETLPLRLFRTR 379
           ET+PL L RT+
Sbjct: 304 ETIPLELIRTK 314


>emb|CBI15584.3| unnamed protein product [Vitis vinifera]
          Length = 314

 Score =  296 bits (758), Expect = 5e-78
 Identities = 145/191 (75%), Positives = 169/191 (88%)
 Frame = -3

Query: 951 RGYLHKPISAMVEFIIESKNSNLPKAPVSPEMVSFYITQDTQRHPLLPELFSGGFRVAGK 772
           RGYL+K +SA +EFII+S  +NL + PV PEMV FYITQDTQRHPLLPEL SGGFRV GK
Sbjct: 124 RGYLYKSLSATMEFIIDSDKANLFEPPVPPEMVIFYITQDTQRHPLLPELRSGGFRVTGK 183

Query: 771 IITQCSLLDPLSGELTVEASAVPINSIDIHILRIESILVGEKIVTETSLIQTTQIADGDV 592
           + +QCSLLDP+SGEL VEASAVPI+SID+ + R+ESILVGEKIVTE+SLIQTTQ +DGDV
Sbjct: 184 VSSQCSLLDPISGELIVEASAVPIHSIDLQLHRVESILVGEKIVTESSLIQTTQASDGDV 243

Query: 591 CRSMTLPIYVIFPRLLTCPTVLAGPFSIEFQVSIVISFQSELSKLHPKYDPRIPRLWLAM 412
           CR +T+PIYVI PRLLTCPTVLAGPFSIEF++SIVI+F+SEL KLHPK DP+ PRLWLAM
Sbjct: 244 CRRVTIPIYVILPRLLTCPTVLAGPFSIEFKISIVITFESELVKLHPKSDPKTPRLWLAM 303

Query: 411 ETLPLRLFRTR 379
           ET+PL L RT+
Sbjct: 304 ETIPLELIRTK 314


Top