BLASTX nr result

ID: Coptis25_contig00015940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015940
         (1695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282756.1| PREDICTED: uncharacterized protein LOC100250...   399   e-109
emb|CAN62770.1| hypothetical protein VITISV_027108 [Vitis vinifera]   399   e-108
ref|XP_002527964.1| conserved hypothetical protein [Ricinus comm...   395   e-107
ref|XP_002330810.1| predicted protein [Populus trichocarpa] gi|2...   392   e-106
emb|CBI20773.3| unnamed protein product [Vitis vinifera]              385   e-104

>ref|XP_002282756.1| PREDICTED: uncharacterized protein LOC100250872 [Vitis vinifera]
          Length = 321

 Score =  399 bits (1026), Expect = e-109
 Identities = 187/278 (67%), Positives = 215/278 (77%), Gaps = 6/278 (2%)
 Frame = -2

Query: 1328 NMEPGQLNINWEDVLCPICLDFPHNGVLLQCSSYDNGCRPFMCDTDHTHSNCLDRFKMAH 1149
            NM+  QL+ NWEDV CPICLDFPHNGVLLQCSSY+ GCRPF+CDTDH HSNCL+RFK A+
Sbjct: 17   NMDNVQLDTNWEDVTCPICLDFPHNGVLLQCSSYEKGCRPFVCDTDHLHSNCLERFKSAY 76

Query: 1148 GMSADVKDPSPSDTRSQEG------NPSTESHGNAPPTCPLCRGEVTGWIVLNEARAHLN 987
            GMS+++K PS SD  +         N    S  +  PTCPLCRGEVTGWIV+++AR  L+
Sbjct: 77   GMSSELKSPSTSDADADAAAAASAENIQQLSEDSCRPTCPLCRGEVTGWIVVDKAREQLD 136

Query: 986  KKTRCCEEAHCAFIGNYLELQDHAKLKHPHARPSKIDPARQLDWDNFQQSSEIIDVLSTI 807
            +K RCC E  CAF+G YLEL++HA+L+HPHARPSKIDPARQLDW+NFQQSSEIIDVLSTI
Sbjct: 137  EKKRCCAEERCAFMGTYLELRNHAQLEHPHARPSKIDPARQLDWENFQQSSEIIDVLSTI 196

Query: 806  HSEVPHGVVLGDYVIEYGENDMQDEFEDFPGDEGNWWTSCILYQVFDNFXXXXXXXXXXX 627
            HSEVP GVVLGDYVIEYG+++  DEFEDFPGDEGNWWTSCILYQVFDNF           
Sbjct: 197  HSEVPRGVVLGDYVIEYGDDETGDEFEDFPGDEGNWWTSCILYQVFDNFRASRNRRRARV 256

Query: 626  XXXXXXRQRPSYDASNSDEGSVTSVDIVEYRVDDNDVE 513
                   +R SYD SNSDEGSVTSV+  EYR D+ D E
Sbjct: 257  SDARRGSRRSSYDTSNSDEGSVTSVEFPEYRADETDDE 294


>emb|CAN62770.1| hypothetical protein VITISV_027108 [Vitis vinifera]
          Length = 325

 Score =  399 bits (1025), Expect = e-108
 Identities = 188/282 (66%), Positives = 215/282 (76%), Gaps = 10/282 (3%)
 Frame = -2

Query: 1328 NMEPGQLNINWEDVLCPICLDFPHNGVLLQCSSYDNGCRPFMCDTDHTHSNCLDRFKMAH 1149
            NM+  QL+ NWEDV CPICLDFPHNGVLLQCSSY+ GCRPF+CDTDH HSNCLDRFK A+
Sbjct: 17   NMDNVQLDTNWEDVTCPICLDFPHNGVLLQCSSYEKGCRPFVCDTDHLHSNCLDRFKSAY 76

Query: 1148 GMSADVKDPSPSDTRSQEG----------NPSTESHGNAPPTCPLCRGEVTGWIVLNEAR 999
            GMS+++K PS SD  +             N    S  +  PTCPLCRGEVTGWIV+++AR
Sbjct: 77   GMSSELKSPSTSDADADADAEAAAAASAENIQQLSEDSCRPTCPLCRGEVTGWIVVDKAR 136

Query: 998  AHLNKKTRCCEEAHCAFIGNYLELQDHAKLKHPHARPSKIDPARQLDWDNFQQSSEIIDV 819
              L++K RCC E  CAF+G YLEL++HA+L+HPHARPSKIDPARQLDW+NFQQSSEIIDV
Sbjct: 137  EQLDEKKRCCAEERCAFMGTYLELRNHAQLEHPHARPSKIDPARQLDWENFQQSSEIIDV 196

Query: 818  LSTIHSEVPHGVVLGDYVIEYGENDMQDEFEDFPGDEGNWWTSCILYQVFDNFXXXXXXX 639
            LSTIHSEVP GVVLGDYVIEYG+++  DEFEDFPGDEGNWWTSCILYQVFDNF       
Sbjct: 197  LSTIHSEVPRGVVLGDYVIEYGDDETGDEFEDFPGDEGNWWTSCILYQVFDNFRASRNRR 256

Query: 638  XXXXXXXXXXRQRPSYDASNSDEGSVTSVDIVEYRVDDNDVE 513
                       +R SYD SNSDEGSVTSV+  EYR D+ D E
Sbjct: 257  RSRVSDARRGSRRSSYDTSNSDEGSVTSVEFPEYRADETDDE 298


>ref|XP_002527964.1| conserved hypothetical protein [Ricinus communis]
            gi|223532590|gb|EEF34376.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 311

 Score =  395 bits (1014), Expect = e-107
 Identities = 185/273 (67%), Positives = 208/273 (76%)
 Frame = -2

Query: 1328 NMEPGQLNINWEDVLCPICLDFPHNGVLLQCSSYDNGCRPFMCDTDHTHSNCLDRFKMAH 1149
            NME  QLN NWE+V+CPICLDFPHN VLLQCSSY+ GCRPF+CDTDH HSNCLDRFK A 
Sbjct: 17   NMEEIQLNTNWEEVVCPICLDFPHNSVLLQCSSYEKGCRPFVCDTDHLHSNCLDRFKSAS 76

Query: 1148 GMSADVKDPSPSDTRSQEGNPSTESHGNAPPTCPLCRGEVTGWIVLNEARAHLNKKTRCC 969
            GMS+    PS SD  +      +   GN+   CPLCRGEV+GW+ + +AR HL++K RCC
Sbjct: 77   GMSS----PSTSDATTTANTQHSVVDGNSRLACPLCRGEVSGWVAIEKARVHLDEKKRCC 132

Query: 968  EEAHCAFIGNYLELQDHAKLKHPHARPSKIDPARQLDWDNFQQSSEIIDVLSTIHSEVPH 789
            EE  C F G YLEL  HA+L+HPHARPSKIDPARQLDW+NFQQSSEIIDVLSTIHSEVP 
Sbjct: 133  EEEQCTFTGTYLELCKHAQLEHPHARPSKIDPARQLDWENFQQSSEIIDVLSTIHSEVPR 192

Query: 788  GVVLGDYVIEYGENDMQDEFEDFPGDEGNWWTSCILYQVFDNFXXXXXXXXXXXXXXXXX 609
            GVVLGDYVIEYG++D  DEFEDFPGDEGNWWTSCILYQVFDNF                 
Sbjct: 193  GVVLGDYVIEYGDDDTVDEFEDFPGDEGNWWTSCILYQVFDNFRNSRNRRRSRVTDTRRG 252

Query: 608  RQRPSYDASNSDEGSVTSVDIVEYRVDDNDVEF 510
             +R SYD SNSDEGSVTSV+  EYR+D+ D EF
Sbjct: 253  SRRMSYDNSNSDEGSVTSVEFAEYRLDETDDEF 285


>ref|XP_002330810.1| predicted protein [Populus trichocarpa] gi|222872612|gb|EEF09743.1|
            predicted protein [Populus trichocarpa]
          Length = 311

 Score =  392 bits (1006), Expect = e-106
 Identities = 181/278 (65%), Positives = 208/278 (74%)
 Frame = -2

Query: 1343 PSNRTNMEPGQLNINWEDVLCPICLDFPHNGVLLQCSSYDNGCRPFMCDTDHTHSNCLDR 1164
            P+N  N+E  QLN NWEDV+CPICLDFPHN VLLQCSSYD GC+PF+CDTDH HSNCL R
Sbjct: 12   PANTINIEDIQLNTNWEDVICPICLDFPHNCVLLQCSSYDKGCQPFVCDTDHLHSNCLGR 71

Query: 1163 FKMAHGMSADVKDPSPSDTRSQEGNPSTESHGNAPPTCPLCRGEVTGWIVLNEARAHLNK 984
            FK A G+S+    PS SD           +  N+   CPLCRGEV GW+V+++AR HL++
Sbjct: 72   FKSASGLSS----PSTSDPTPATNTQPAVADSNSKLVCPLCRGEVIGWVVVDKARLHLDE 127

Query: 983  KTRCCEEAHCAFIGNYLELQDHAKLKHPHARPSKIDPARQLDWDNFQQSSEIIDVLSTIH 804
            K RCC E  C F+G Y EL +HA+++HPHARPSKIDPARQLDW+NFQQSSEIIDVLSTIH
Sbjct: 128  KKRCCAEEQCTFMGTYFELHEHAQIEHPHARPSKIDPARQLDWENFQQSSEIIDVLSTIH 187

Query: 803  SEVPHGVVLGDYVIEYGENDMQDEFEDFPGDEGNWWTSCILYQVFDNFXXXXXXXXXXXX 624
            SEVP G+VLGDYVIEYG++D  DEFEDFPGDEGNWWTSCILYQVFDNF            
Sbjct: 188  SEVPRGIVLGDYVIEYGDDDTGDEFEDFPGDEGNWWTSCILYQVFDNFRNSRNRRRARIA 247

Query: 623  XXXXXRQRPSYDASNSDEGSVTSVDIVEYRVDDNDVEF 510
                  +  SYD SNSDEGSVTSVD  EYR+D+ D EF
Sbjct: 248  DTRRGSRHSSYDTSNSDEGSVTSVDFAEYRLDETDDEF 285


>emb|CBI20773.3| unnamed protein product [Vitis vinifera]
          Length = 292

 Score =  385 bits (989), Expect = e-104
 Identities = 181/272 (66%), Positives = 206/272 (75%)
 Frame = -2

Query: 1328 NMEPGQLNINWEDVLCPICLDFPHNGVLLQCSSYDNGCRPFMCDTDHTHSNCLDRFKMAH 1149
            NM+  QL+ NWEDV CPICLDFPHNGVLLQCSSY+ GCRPF+CDTDH HSNCL+RFK A+
Sbjct: 17   NMDNVQLDTNWEDVTCPICLDFPHNGVLLQCSSYEKGCRPFVCDTDHLHSNCLERFKSAY 76

Query: 1148 GMSADVKDPSPSDTRSQEGNPSTESHGNAPPTCPLCRGEVTGWIVLNEARAHLNKKTRCC 969
            GMS+D +                       PTCPLCRGEVTGWIV+++AR  L++K RCC
Sbjct: 77   GMSSDCR-----------------------PTCPLCRGEVTGWIVVDKAREQLDEKKRCC 113

Query: 968  EEAHCAFIGNYLELQDHAKLKHPHARPSKIDPARQLDWDNFQQSSEIIDVLSTIHSEVPH 789
             E  CAF+G YLEL++HA+L+HPHARPSKIDPARQLDW+NFQQSSEIIDVLSTIHSEVP 
Sbjct: 114  AEERCAFMGTYLELRNHAQLEHPHARPSKIDPARQLDWENFQQSSEIIDVLSTIHSEVPR 173

Query: 788  GVVLGDYVIEYGENDMQDEFEDFPGDEGNWWTSCILYQVFDNFXXXXXXXXXXXXXXXXX 609
            GVVLGDYVIEYG+++  DEFEDFPGDEGNWWTSCILYQVFDNF                 
Sbjct: 174  GVVLGDYVIEYGDDETGDEFEDFPGDEGNWWTSCILYQVFDNFRASRNRRRARVSDARRG 233

Query: 608  RQRPSYDASNSDEGSVTSVDIVEYRVDDNDVE 513
             +R SYD SNSDEGSVTSV+  EYR D+ D E
Sbjct: 234  SRRSSYDTSNSDEGSVTSVEFPEYRADETDDE 265


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