BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015939
         (1204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15512.3| unnamed protein product [Vitis vinifera]              399   e-120
emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]   397   e-119
ref|XP_002521455.1| pentatricopeptide repeat-containing protein,...   387   e-117
ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containi...   376   e-112
ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containi...   376   e-112

>emb|CBI15512.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  399 bits (1024), Expect(2) = e-120
 Identities = 195/328 (59%), Positives = 239/328 (72%), Gaps = 3/328 (0%)
 Frame = +3

Query: 225  TRVLLRCQSDPVTSFRFFTWVRIFLSIRLTVTNYCVILHILTWSRNFHLAMKLLCQVIEI 404
            +RVLLRCQSD  T+  FF WV+  L +R +  NYC+++H L WSRNF  AMK LC+++E+
Sbjct: 104  SRVLLRCQSDSFTALSFFNWVKNDLGLRPSTQNYCIVVHTLAWSRNFSQAMKFLCELVEL 163

Query: 405  ECND---DDVFDKLVLCSQVCNWSAVVFDMLIKAYVKTSNVKDGLKV*KKMIGMGLVLDV 575
              +D   +DVF  L+LC++ CNW  VVFDML+KAY++   V++GL+  ++M+ +G V  V
Sbjct: 164  VKDDLPSEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTV 223

Query: 576  SACKCLLNGLLKSDRVDLCLEVYNEMGRVEITPNSYAFNILTHVLCKDGDVGKVNXXXXX 755
                 LLNGLLK +  D C EVY EM R  I PN Y FNILTHVLCKDGD GKVN     
Sbjct: 224  ITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEK 283

Query: 756  XXXXXXXPDVVTYNTLIKSYCRKGRLDDAFYLYKIMYRRFVPPDLVTYTVLMKGLCNQGK 935
                   PD+VTYNTLI SYCRKGRLDDAFYLYKIMYRR V PDLV+YT LM GLC +G+
Sbjct: 284  MEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGR 343

Query: 936  VKEAHQLFHRMIDRGFSPDTLAYNSLICGYGKKGKMQEAKSLYREMIQRGLSLDSTTCHL 1115
            V+EAHQLFHRM+ RG SPD + YN+LI GY K+GKMQE++SL  +MI  G+S DS TC +
Sbjct: 344  VREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWV 403

Query: 1116 LVKGYGKVGKLLSSLNLVVEFQRLGVLI 1199
            LV+GYGK GK LS+LNLVVE QR GV I
Sbjct: 404  LVEGYGKEGKFLSALNLVVELQRFGVSI 431



 Score = 59.7 bits (143), Expect(2) = e-120
 Identities = 29/49 (59%), Positives = 37/49 (75%)
 Frame = +1

Query: 79  ITNPLYNLLPQTQNPNKIVNLICSHLKHNNNNSQLTSLDFKKQVVPHLG 225
           I+N LY+LLPQTQNPN IVNLICS+LK +N+N  L   +    ++PHLG
Sbjct: 52  ISNSLYHLLPQTQNPNNIVNLICSNLKQHNSNLALLHTEV-NALLPHLG 99



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 60/242 (24%), Positives = 107/242 (44%)
 Frame = +3

Query: 471  VVFDMLIKAYVKTSNVKDGLKV*KKMIGMGLVLDVSACKCLLNGLLKSDRVDLCLEVYNE 650
            V ++ LI +Y +   + D   + K M   G+V D+ +   L+NGL K  RV    ++++ 
Sbjct: 294  VTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHR 353

Query: 651  MGRVEITPNSYAFNILTHVLCKDGDVGKVNXXXXXXXXXXXXPDVVTYNTLIKSYCRKGR 830
            M    ++P+   +N L H  CK+G + +              PD  T   L++ Y ++G+
Sbjct: 354  MVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGK 413

Query: 831  LDDAFYLYKIMYRRFVPPDLVTYTVLMKGLCNQGKVKEAHQLFHRMIDRGFSPDTLAYNS 1010
               A  L   + R  V      Y+ L+  LC + +   A  L  RM   G  P+   YN 
Sbjct: 414  FLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNE 473

Query: 1011 LICGYGKKGKMQEAKSLYREMIQRGLSLDSTTCHLLVKGYGKVGKLLSSLNLVVEFQRLG 1190
            LI  + +   + EA  L  EM+ + +  +  T   ++    ++ + +   +LV E    G
Sbjct: 474  LIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASG 533

Query: 1191 VL 1196
            +L
Sbjct: 534  ML 535



 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 61/233 (26%), Positives = 104/233 (44%)
 Frame = +3

Query: 477  FDMLIKAYVKTSNVKDGLKV*KKMIGMGLVLDVSACKCLLNGLLKSDRVDLCLEVYNEMG 656
            F++L     K  +     K  +KM   G   D+     L+N   +  R+D    +Y  M 
Sbjct: 261  FNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMY 320

Query: 657  RVEITPNSYAFNILTHVLCKDGDVGKVNXXXXXXXXXXXXPDVVTYNTLIKSYCRKGRLD 836
            R  + P+  ++  L + LCK+G V + +            PD+VTYNTLI  YC++G++ 
Sbjct: 321  RRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQ 380

Query: 837  DAFYLYKIMYRRFVPPDLVTYTVLMKGLCNQGKVKEAHQLFHRMIDRGFSPDTLAYNSLI 1016
            ++  L   M    + PD  T  VL++G   +GK   A  L   +   G S     Y+ LI
Sbjct: 381  ESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLI 440

Query: 1017 CGYGKKGKMQEAKSLYREMIQRGLSLDSTTCHLLVKGYGKVGKLLSSLNLVVE 1175
                ++ +   AK+L   M + G   +    + L+K + +   +  +L L +E
Sbjct: 441  VALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEALLLKME 493



 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 54/242 (22%), Positives = 102/242 (42%)
 Frame = +3

Query: 471  VVFDMLIKAYVKTSNVKDGLKV*KKMIGMGLVLDVSACKCLLNGLLKSDRVDLCLEVYNE 650
            V ++ LI  Y K   +++   +   MI  G+  D   C  L+ G  K  +    L +  E
Sbjct: 364  VTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVE 423

Query: 651  MGRVEITPNSYAFNILTHVLCKDGDVGKVNXXXXXXXXXXXXPDVVTYNTLIKSYCRKGR 830
            + R  ++ +   ++ L   LC++                   P++  YN LIKS+C+   
Sbjct: 424  LQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDC 483

Query: 831  LDDAFYLYKIMYRRFVPPDLVTYTVLMKGLCNQGKVKEAHQLFHRMIDRGFSPDTLAYNS 1010
            + +A  L   M  + + P+L TY  ++  L    +  E   L   M+  G  PD     +
Sbjct: 484  IAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEICRA 543

Query: 1011 LICGYGKKGKMQEAKSLYREMIQRGLSLDSTTCHLLVKGYGKVGKLLSSLNLVVEFQRLG 1190
            L  GY ++  + +A+SL     +     D+ + + L++     G +  SL +     ++G
Sbjct: 544  LFYGYCRENDIDKAESLLSFFAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMG 603

Query: 1191 VL 1196
            +L
Sbjct: 604  LL 605


>emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
          Length = 676

 Score =  397 bits (1021), Expect(2) = e-119
 Identities = 195/328 (59%), Positives = 239/328 (72%), Gaps = 3/328 (0%)
 Frame = +3

Query: 225  TRVLLRCQSDPVTSFRFFTWVRIFLSIRLTVTNYCVILHILTWSRNFHLAMKLLCQVIEI 404
            +RVLLRCQSD  T+  FF WV+  L +R +  NYC+I+H L WSRNF  A+K LC+++E+
Sbjct: 149  SRVLLRCQSDSFTALSFFNWVKNDLGLRPSTQNYCIIVHTLAWSRNFSQAIKFLCELVEL 208

Query: 405  ECND---DDVFDKLVLCSQVCNWSAVVFDMLIKAYVKTSNVKDGLKV*KKMIGMGLVLDV 575
              +D   +DVF  L+LC++ CNW  VVFDML+KAY++   V++GL+  ++M+ +G V  V
Sbjct: 209  VKDDLPGEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTV 268

Query: 576  SACKCLLNGLLKSDRVDLCLEVYNEMGRVEITPNSYAFNILTHVLCKDGDVGKVNXXXXX 755
                 LLNGLLK +  D C EVY EM R  I PN Y FNILTHVLCKDGD GKVN     
Sbjct: 269  ITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEK 328

Query: 756  XXXXXXXPDVVTYNTLIKSYCRKGRLDDAFYLYKIMYRRFVPPDLVTYTVLMKGLCNQGK 935
                   PD+VTYNTLI SYCRKGRLDDAFYLYKIMYRR V PDLV+YT LM GLC +G+
Sbjct: 329  MEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGR 388

Query: 936  VKEAHQLFHRMIDRGFSPDTLAYNSLICGYGKKGKMQEAKSLYREMIQRGLSLDSTTCHL 1115
            V+EAHQLFHRM+ RG SPD + YN+LI GY K+GKMQE++SL  +MI  G+S DS TC +
Sbjct: 389  VREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWV 448

Query: 1116 LVKGYGKVGKLLSSLNLVVEFQRLGVLI 1199
            LV+GYGK GK LS+LNLVVE QR GV I
Sbjct: 449  LVEGYGKEGKFLSALNLVVELQRFGVSI 476



 Score = 59.7 bits (143), Expect(2) = e-119
 Identities = 29/49 (59%), Positives = 37/49 (75%)
 Frame = +1

Query: 79  ITNPLYNLLPQTQNPNKIVNLICSHLKHNNNNSQLTSLDFKKQVVPHLG 225
           I+N LY+LLPQTQNPN IVNLICS+LK +N+N  L   +    ++PHLG
Sbjct: 97  ISNSLYHLLPQTQNPNNIVNLICSNLKQHNSNLALLHTEV-NALLPHLG 144



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 62/233 (26%), Positives = 104/233 (44%)
 Frame = +3

Query: 477  FDMLIKAYVKTSNVKDGLKV*KKMIGMGLVLDVSACKCLLNGLLKSDRVDLCLEVYNEMG 656
            F++L     K  +     K  +KM   G   D+     L+N   +  R+D    +Y  M 
Sbjct: 306  FNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMY 365

Query: 657  RVEITPNSYAFNILTHVLCKDGDVGKVNXXXXXXXXXXXXPDVVTYNTLIKSYCRKGRLD 836
            R  + P+  ++  L + LCK+G V + +            PD+VTYNTLI  YC++G++ 
Sbjct: 366  RRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQ 425

Query: 837  DAFYLYKIMYRRFVPPDLVTYTVLMKGLCNQGKVKEAHQLFHRMIDRGFSPDTLAYNSLI 1016
            ++  L   M    + PD  T  VL++G   +GK   A  L   +   G S     Y+ LI
Sbjct: 426  ESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLI 485

Query: 1017 CGYGKKGKMQEAKSLYREMIQRGLSLDSTTCHLLVKGYGKVGKLLSSLNLVVE 1175
                ++ +   AK+L   M Q G   +    + L+K + +   +  +L L +E
Sbjct: 486  VALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKME 538



 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 59/242 (24%), Positives = 105/242 (43%)
 Frame = +3

Query: 471  VVFDMLIKAYVKTSNVKDGLKV*KKMIGMGLVLDVSACKCLLNGLLKSDRVDLCLEVYNE 650
            V ++ LI +Y +   + D   + K M   G+V D+ +   L+NGL K  RV    ++++ 
Sbjct: 339  VTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHR 398

Query: 651  MGRVEITPNSYAFNILTHVLCKDGDVGKVNXXXXXXXXXXXXPDVVTYNTLIKSYCRKGR 830
            M    ++P+   +N L H  CK+G + +              PD  T   L++ Y ++G+
Sbjct: 399  MVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGK 458

Query: 831  LDDAFYLYKIMYRRFVPPDLVTYTVLMKGLCNQGKVKEAHQLFHRMIDRGFSPDTLAYNS 1010
               A  L   + R  V      Y+ L+  LC + +   A  L  RM   G   +   YN 
Sbjct: 459  FLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNE 518

Query: 1011 LICGYGKKGKMQEAKSLYREMIQRGLSLDSTTCHLLVKGYGKVGKLLSSLNLVVEFQRLG 1190
            LI  + +   + EA  L  EM+ + +  +  T   ++    ++ + +   +LV E    G
Sbjct: 519  LIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASG 578

Query: 1191 VL 1196
             L
Sbjct: 579  XL 580



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 53/242 (21%), Positives = 101/242 (41%)
 Frame = +3

Query: 471  VVFDMLIKAYVKTSNVKDGLKV*KKMIGMGLVLDVSACKCLLNGLLKSDRVDLCLEVYNE 650
            V ++ LI  Y K   +++   +   MI  G+  D   C  L+ G  K  +    L +  E
Sbjct: 409  VTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVE 468

Query: 651  MGRVEITPNSYAFNILTHVLCKDGDVGKVNXXXXXXXXXXXXPDVVTYNTLIKSYCRKGR 830
            + R  ++ +   ++ L   LC++                    ++  YN LIKS+C+   
Sbjct: 469  LQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDC 528

Query: 831  LDDAFYLYKIMYRRFVPPDLVTYTVLMKGLCNQGKVKEAHQLFHRMIDRGFSPDTLAYNS 1010
            + +A  L   M  + + P+L TY  ++  L    +  E   L   M+  G  PD     +
Sbjct: 529  IAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRA 588

Query: 1011 LICGYGKKGKMQEAKSLYREMIQRGLSLDSTTCHLLVKGYGKVGKLLSSLNLVVEFQRLG 1190
            L  GY ++  + +A+SL     +     D+ + + L++     G +  SL +     ++G
Sbjct: 589  LFYGYCRENDIDKAESLLSFXAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMG 648

Query: 1191 VL 1196
            +L
Sbjct: 649  LL 650


>ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223539354|gb|EEF40945.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 623

 Score =  387 bits (993), Expect(2) = e-117
 Identities = 183/328 (55%), Positives = 242/328 (73%), Gaps = 3/328 (0%)
 Frame = +3

Query: 225  TRVLLRCQSDPVTSFRFFTWVRIFLSIRLTVTNYCVILHILTWSRNFHLAMKLLCQVIEI 404
            +RVLLRCQSD +++  FF+WV+  L ++ ++ NYC ++HIL WS+ F  AMK L ++I++
Sbjct: 95   SRVLLRCQSDSISALTFFSWVKNDLGLQPSIQNYCFLVHILAWSKEFKEAMKFLTELIKL 154

Query: 405  --ECN-DDDVFDKLVLCSQVCNWSAVVFDMLIKAYVKTSNVKDGLKV*KKMIGMGLVLDV 575
              +C+ ++DVF  L+ C Q CNW  V+FDML+KAYV+   +K+G    +K++ +G V  V
Sbjct: 155  VKDCSFNEDVFQTLLFCCQDCNWDPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSV 214

Query: 576  SACKCLLNGLLKSDRVDLCLEVYNEMGRVEITPNSYAFNILTHVLCKDGDVGKVNXXXXX 755
             +C CLLNGLLK +R+D C +VY EM RV I PNSY FNILTHV C+DGDV KVN     
Sbjct: 215  ISCNCLLNGLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLER 274

Query: 756  XXXXXXXPDVVTYNTLIKSYCRKGRLDDAFYLYKIMYRRFVPPDLVTYTVLMKGLCNQGK 935
                   PD+VTYNTLI  YCRKGRLDDAFYLY+IMYRR V PDLV+YT LM GLC +GK
Sbjct: 275  MEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGK 334

Query: 936  VKEAHQLFHRMIDRGFSPDTLAYNSLICGYGKKGKMQEAKSLYREMIQRGLSLDSTTCHL 1115
            V+EAHQLFHRMI RG +PD +++N+LICGY K+GKM+E++SL  EMI  G+  D  TC +
Sbjct: 335  VREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQV 394

Query: 1116 LVKGYGKVGKLLSSLNLVVEFQRLGVLI 1199
            L++GY K  +++S+LNLVVE +R GV I
Sbjct: 395  LIEGYRKEARIVSALNLVVELERFGVPI 422



 Score = 63.9 bits (154), Expect(2) = e-117
 Identities = 34/61 (55%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
 Frame = +1

Query: 49  LSNPTPKPLLITNPLYNLLPQTQNPNKIVNLICSHLK-HNNNNSQLTSL-DFKKQVVPHL 222
           L+ P      ++NPLY+LLPQTQNPN IVN++ S LK HNNNNS L  L +  K ++PHL
Sbjct: 30  LAIPDSNSRSLSNPLYHLLPQTQNPNNIVNIVYSSLKQHNNNNSHLNLLQNDVKHLLPHL 89

Query: 223 G 225
           G
Sbjct: 90  G 90



 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 59/224 (26%), Positives = 99/224 (44%)
 Frame = +3

Query: 459  NWSAVVFDMLIKAYVKTSNVKDGLKV*KKMIGMGLVLDVSACKCLLNGLLKSDRVDLCLE 638
            N   V F+ LI  Y K   +++   +  +MIG G+  D   C+ L+ G  K  R+   L 
Sbjct: 351  NPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALN 410

Query: 639  VYNEMGRVEITPNSYAFNILTHVLCKDGDVGKVNXXXXXXXXXXXXPDVVTYNTLIKSYC 818
            +  E+ R  +  ++  ++ L   +C++G                  P V  YN LI+S C
Sbjct: 411  LVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLC 470

Query: 819  RKGRLDDAFYLYKIMYRRFVPPDLVTYTVLMKGLCNQGKVKEAHQLFHRMIDRGFSPDTL 998
            +   + DA  +   M  R + P  +TY  L+  LC   +  EA  L   M+  G  PD  
Sbjct: 471  KSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPD 530

Query: 999  AYNSLICGYGKKGKMQEAKSLYREMIQRGLSLDSTTCHLLVKGY 1130
               +L+  Y K+  + +A++L +   +     DS + + LVK Y
Sbjct: 531  ICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESYNTLVKTY 574



 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 60/242 (24%), Positives = 106/242 (43%)
 Frame = +3

Query: 471  VVFDMLIKAYVKTSNVKDGLKV*KKMIGMGLVLDVSACKCLLNGLLKSDRVDLCLEVYNE 650
            V ++ LI  Y +   + D   + + M    ++ D+ +   L+NGL K  +V    ++++ 
Sbjct: 285  VTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHR 344

Query: 651  MGRVEITPNSYAFNILTHVLCKDGDVGKVNXXXXXXXXXXXXPDVVTYNTLIKSYCRKGR 830
            M    + P+  +FN L    CK+G + +              PD VT   LI+ Y ++ R
Sbjct: 345  MIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEAR 404

Query: 831  LDDAFYLYKIMYRRFVPPDLVTYTVLMKGLCNQGKVKEAHQLFHRMIDRGFSPDTLAYNS 1010
            +  A  L   + R  VP     Y  LM  +C +G+   A  L  R+  RG+ P    YN 
Sbjct: 405  IVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNK 464

Query: 1011 LICGYGKKGKMQEAKSLYREMIQRGLSLDSTTCHLLVKGYGKVGKLLSSLNLVVEFQRLG 1190
            LI    K   + +A  +  EM  R +   + T   L+    +  + + + +L+ E  + G
Sbjct: 465  LIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSG 524

Query: 1191 VL 1196
            +L
Sbjct: 525  ML 526



 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 45/199 (22%), Positives = 79/199 (39%)
 Frame = +3

Query: 465  SAVVFDMLIKAYVKTSNVKDGLKV*KKMIGMGLVLDVSACKCLLNGLLKSDRVDLCLEVY 644
            S  ++D L+ +  +         + +++   G V  V     L+  L KSD +   L V 
Sbjct: 423  STDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVK 482

Query: 645  NEMGRVEITPNSYAFNILTHVLCKDGDVGKVNXXXXXXXXXXXXPDVVTYNTLIKSYCRK 824
            +EMG   I P++  +  L   LC+     +              PD      L+  YC++
Sbjct: 483  SEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKE 542

Query: 825  GRLDDAFYLYKIMYRRFVPPDLVTYTVLMKGLCNQGKVKEAHQLFHRMIDRGFSPDTLAY 1004
              +  A  L +   + F   D  +Y  L+K  C         +L  RM+  GF+P+   +
Sbjct: 543  RDIGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFAPNIQTF 602

Query: 1005 NSLICGYGKKGKMQEAKSL 1061
              +I G  K   +++ K L
Sbjct: 603  RQMIHGLWKAMAVEKDKLL 621


>ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40400-like
            [Cucumis sativus]
          Length = 636

 Score =  376 bits (966), Expect(2) = e-112
 Identities = 185/328 (56%), Positives = 237/328 (72%), Gaps = 3/328 (0%)
 Frame = +3

Query: 225  TRVLLRCQSDPVTSFRFFTWVRIFLSIRLTVTNYCVILHILTWSRNFHLAMKLLCQVIEI 404
            +++LLRCQS+ V++  FF WV+  L IRL+  NYC+I+HIL WSR F LAMK L ++IE+
Sbjct: 106  SKILLRCQSNFVSALAFFNWVKYDLDIRLSSHNYCLIIHILAWSRQFPLAMKFLSELIEL 165

Query: 405  E---CNDDDVFDKLVLCSQVCNWSAVVFDMLIKAYVKTSNVKDGLKV*KKMIGMGLVLDV 575
                 + +DVF  LVLC++ CNW+ V+F+MLIKAYVK   + +     KKM+ +G V +V
Sbjct: 166  SKDVSSSEDVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNV 225

Query: 576  SACKCLLNGLLKSDRVDLCLEVYNEMGRVEITPNSYAFNILTHVLCKDGDVGKVNXXXXX 755
             AC C+LNGL K      C E+Y EMGR+ +  N+Y FNILT+VLC+DGDV K+N     
Sbjct: 226  IACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEK 285

Query: 756  XXXXXXXPDVVTYNTLIKSYCRKGRLDDAFYLYKIMYRRFVPPDLVTYTVLMKGLCNQGK 935
                   PDVVTYNTLI SY R+GRL+DAFYLYKIMYRR V PDLV+YT LM+GLC  G+
Sbjct: 286  MEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGR 345

Query: 936  VKEAHQLFHRMIDRGFSPDTLAYNSLICGYGKKGKMQEAKSLYREMIQRGLSLDSTTCHL 1115
            V+EAHQLFHRMIDRG  PD + YN+LI  Y K G +QEA+SL  EMI  G+  DS TC +
Sbjct: 346  VREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRI 405

Query: 1116 LVKGYGKVGKLLSSLNLVVEFQRLGVLI 1199
            LV+GYG+ G+L+S+LNLVVE Q+LGV +
Sbjct: 406  LVEGYGREGRLISALNLVVEIQKLGVTV 433



 Score = 56.6 bits (135), Expect(2) = e-112
 Identities = 31/63 (49%), Positives = 37/63 (58%)
 Frame = +1

Query: 37  STSSLSNPTPKPLLITNPLYNLLPQTQNPNKIVNLICSHLKHNNNNSQLTSLDFKKQVVP 216
           ST   S P  +  LI NPLY+ LPQ QNP  IV L+ SHLK NN    L      K+++P
Sbjct: 40  STFLQSIPESEAKLIVNPLYHFLPQNQNPFNIVELVSSHLKTNNPRLALLQSHI-KELIP 98

Query: 217 HLG 225
           HLG
Sbjct: 99  HLG 101



 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 63/242 (26%), Positives = 104/242 (42%)
 Frame = +3

Query: 471  VVFDMLIKAYVKTSNVKDGLKV*KKMIGMGLVLDVSACKCLLNGLLKSDRVDLCLEVYNE 650
            V+++ LI AY K   +++   +  +MIG+G+  D   C+ L+ G  +  R+   L +  E
Sbjct: 366  VLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVE 425

Query: 651  MGRVEITPNSYAFNILTHVLCKDGDVGKVNXXXXXXXXXXXXPDVVTYNTLIKSYCRKGR 830
            + ++ +T     +  L   LC++                   PD   YN LI+S+CR   
Sbjct: 426  IQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNN 485

Query: 831  LDDAFYLYKIMYRRFVPPDLVTYTVLMKGLCNQGKVKEAHQLFHRMIDRGFSPDTLAYNS 1010
            + +A  L   M  R   P   TY  L+  +C   +  +   L   M++    PD     +
Sbjct: 486  VSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPDHEICRA 545

Query: 1011 LICGYGKKGKMQEAKSLYREMIQRGLSLDSTTCHLLVKGYGKVGKLLSSLNLVVEFQRLG 1190
            L+ GY K+G   +A+SL     Q     DS + + LVK Y  VG     + L     + G
Sbjct: 546  LVNGYCKEGNADKAESLLVSFAQDFQFFDSESFNSLVKVYRDVGNETKLMELQDRMLKAG 605

Query: 1191 VL 1196
             L
Sbjct: 606  FL 607



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 65/272 (23%), Positives = 108/272 (39%), Gaps = 35/272 (12%)
 Frame = +3

Query: 465  SAVVFDMLIKAYVKTSNVKDGLKV*KKMIGMGLVLDVSACKCLLNGLLKSDRVDLCLEVY 644
            +A  F++L     +  +V       +KM   G   DV     L++  ++  R++    +Y
Sbjct: 259  NAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLY 318

Query: 645  NEMGRVEITPNSYAFNILTHVLCKDGDVGKVNXXXXXXXXXXXXPDVVTYNTLIKSYCRK 824
              M R  + P+  ++  L   LC+ G V + +            PDVV YNTLI +YC+ 
Sbjct: 319  KIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKD 378

Query: 825  GRLDDAFYLYKIMYRRFVPPDLVTYTVLMKG----------------------------- 917
            G L +A  L   M    + PD  T  +L++G                             
Sbjct: 379  GMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIY 438

Query: 918  ------LCNQGKVKEAHQLFHRMIDRGFSPDTLAYNSLICGYGKKGKMQEAKSLYREMIQ 1079
                  LC + +   A  L  R+++  F PD+  YN LI  + +   + EA  L  EMI 
Sbjct: 439  KYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMIN 498

Query: 1080 RGLSLDSTTCHLLVKGYGKVGKLLSSLNLVVE 1175
            R     + T   L+    ++ + +    L+VE
Sbjct: 499  RNYKPTTDTYKSLIHCMCEINRSVDGEGLMVE 530


>ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40400-like
            [Cucumis sativus]
          Length = 632

 Score =  376 bits (966), Expect(2) = e-112
 Identities = 185/328 (56%), Positives = 237/328 (72%), Gaps = 3/328 (0%)
 Frame = +3

Query: 225  TRVLLRCQSDPVTSFRFFTWVRIFLSIRLTVTNYCVILHILTWSRNFHLAMKLLCQVIEI 404
            +++LLRCQS+ V++  FF WV+  L IRL+  NYC+I+HIL WSR F LAMK L ++IE+
Sbjct: 102  SKILLRCQSNFVSALAFFNWVKYDLDIRLSSHNYCLIIHILAWSRQFPLAMKFLSELIEL 161

Query: 405  E---CNDDDVFDKLVLCSQVCNWSAVVFDMLIKAYVKTSNVKDGLKV*KKMIGMGLVLDV 575
                 + +DVF  LVLC++ CNW+ V+F+MLIKAYVK   + +     KKM+ +G V +V
Sbjct: 162  SKDVSSSEDVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNV 221

Query: 576  SACKCLLNGLLKSDRVDLCLEVYNEMGRVEITPNSYAFNILTHVLCKDGDVGKVNXXXXX 755
             AC C+LNGL K      C E+Y EMGR+ +  N+Y FNILT+VLC+DGDV K+N     
Sbjct: 222  IACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEK 281

Query: 756  XXXXXXXPDVVTYNTLIKSYCRKGRLDDAFYLYKIMYRRFVPPDLVTYTVLMKGLCNQGK 935
                   PDVVTYNTLI SY R+GRL+DAFYLYKIMYRR V PDLV+YT LM+GLC  G+
Sbjct: 282  MEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGR 341

Query: 936  VKEAHQLFHRMIDRGFSPDTLAYNSLICGYGKKGKMQEAKSLYREMIQRGLSLDSTTCHL 1115
            V+EAHQLFHRMIDRG  PD + YN+LI  Y K G +QEA+SL  EMI  G+  DS TC +
Sbjct: 342  VREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRI 401

Query: 1116 LVKGYGKVGKLLSSLNLVVEFQRLGVLI 1199
            LV+GYG+ G+L+S+LNLVVE Q+LGV +
Sbjct: 402  LVEGYGREGRLISALNLVVEIQKLGVTV 429



 Score = 56.6 bits (135), Expect(2) = e-112
 Identities = 31/63 (49%), Positives = 37/63 (58%)
 Frame = +1

Query: 37  STSSLSNPTPKPLLITNPLYNLLPQTQNPNKIVNLICSHLKHNNNNSQLTSLDFKKQVVP 216
           ST   S P  +  LI NPLY+ LPQ QNP  IV L+ SHLK NN    L      K+++P
Sbjct: 36  STFLQSIPESEAKLIVNPLYHFLPQNQNPFNIVELVSSHLKTNNPRLALLQSHI-KELIP 94

Query: 217 HLG 225
           HLG
Sbjct: 95  HLG 97



 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 62/242 (25%), Positives = 104/242 (42%)
 Frame = +3

Query: 471  VVFDMLIKAYVKTSNVKDGLKV*KKMIGMGLVLDVSACKCLLNGLLKSDRVDLCLEVYNE 650
            V+++ LI AY K   +++   +  +MIG+G+  D   C+ L+ G  +  R+   L +  E
Sbjct: 362  VLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVE 421

Query: 651  MGRVEITPNSYAFNILTHVLCKDGDVGKVNXXXXXXXXXXXXPDVVTYNTLIKSYCRKGR 830
            + ++ +T     +  L   LC++                   PD   YN LI+S+CR   
Sbjct: 422  IQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNN 481

Query: 831  LDDAFYLYKIMYRRFVPPDLVTYTVLMKGLCNQGKVKEAHQLFHRMIDRGFSPDTLAYNS 1010
            + +A  L   M  R   P   TY  L+  +C   +  +   L   M++    PD     +
Sbjct: 482  VSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPDHEICRA 541

Query: 1011 LICGYGKKGKMQEAKSLYREMIQRGLSLDSTTCHLLVKGYGKVGKLLSSLNLVVEFQRLG 1190
            L+ GY K+G   +A+SL     +     DS + + LVK Y  VG     + L     + G
Sbjct: 542  LVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYRDVGNETKLMELQDRMLKAG 601

Query: 1191 VL 1196
             L
Sbjct: 602  FL 603



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 65/272 (23%), Positives = 108/272 (39%), Gaps = 35/272 (12%)
 Frame = +3

Query: 465  SAVVFDMLIKAYVKTSNVKDGLKV*KKMIGMGLVLDVSACKCLLNGLLKSDRVDLCLEVY 644
            +A  F++L     +  +V       +KM   G   DV     L++  ++  R++    +Y
Sbjct: 255  NAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLY 314

Query: 645  NEMGRVEITPNSYAFNILTHVLCKDGDVGKVNXXXXXXXXXXXXPDVVTYNTLIKSYCRK 824
              M R  + P+  ++  L   LC+ G V + +            PDVV YNTLI +YC+ 
Sbjct: 315  KIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKD 374

Query: 825  GRLDDAFYLYKIMYRRFVPPDLVTYTVLMKG----------------------------- 917
            G L +A  L   M    + PD  T  +L++G                             
Sbjct: 375  GMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIY 434

Query: 918  ------LCNQGKVKEAHQLFHRMIDRGFSPDTLAYNSLICGYGKKGKMQEAKSLYREMIQ 1079
                  LC + +   A  L  R+++  F PD+  YN LI  + +   + EA  L  EMI 
Sbjct: 435  KYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMIN 494

Query: 1080 RGLSLDSTTCHLLVKGYGKVGKLLSSLNLVVE 1175
            R     + T   L+    ++ + +    L+VE
Sbjct: 495  RNYKPTTDTYKSLIHCMCEINRSVDGEGLMVE 526