BLASTX nr result

ID: Coptis25_contig00015933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015933
         (1315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283687.1| PREDICTED: uncharacterized protein LOC100251...   371   e-100
ref|XP_002530865.1| conserved hypothetical protein [Ricinus comm...   360   6e-97
ref|XP_003518643.1| PREDICTED: uncharacterized protein LOC100780...   346   9e-93
ref|XP_004156706.1| PREDICTED: uncharacterized LOC101214727 [Cuc...   345   1e-92
emb|CBI31683.3| unnamed protein product [Vitis vinifera]              345   1e-92

>ref|XP_002283687.1| PREDICTED: uncharacterized protein LOC100251328 [Vitis vinifera]
          Length = 307

 Score =  371 bits (952), Expect = e-100
 Identities = 184/283 (65%), Positives = 221/283 (78%)
 Frame = +2

Query: 131 GGFSHESEHDLALMVSDFLENGSGGAXXXXXXXXXXXXNGLSDLAYLAERILHYKRTVDQ 310
           GGFSHESEHDLA+MVSDFLENGS GA            +G SDLA+L E+I  YK ++D+
Sbjct: 24  GGFSHESEHDLAMMVSDFLENGSVGAESCCSSDSD---SGFSDLAFLPEKISFYKHSMDR 80

Query: 311 CESNLLAVVHSLICAINETDLHFVHSGACNARCIRFCLVKLLRSSGYDAAVCVSKWQNCG 490
            ES+LL++VHS + +INETDLHFV+SG CN  CIRFCLVK LR SGYDAAVC S+WQ CG
Sbjct: 81  YESDLLSMVHSFMLSINETDLHFVNSGPCNTSCIRFCLVKRLRLSGYDAAVCSSRWQGCG 140

Query: 491 KVPGGDHEYIDVVTHSDGGGSKRFIIDIDFRSHFEIARAVESYDTVLGSLPVAFVGYLSK 670
           KVPGGDHEYIDVV + D G ++R IIDIDFRSHFEIARAVESYD +L SLPV +VG L+K
Sbjct: 141 KVPGGDHEYIDVVNYKDNGSTERLIIDIDFRSHFEIARAVESYDRILSSLPVIYVGSLTK 200

Query: 671 LKQLLPVMVEAARSSLKKNSMPFPPWRSLAYLQAKWHSTYQRKISPDEPRTRETTNFSRK 850
           LKQ L VMVEAARSSLK+NSMP PPWRSL YL+AKW S+YQR+ +PD    +   +   K
Sbjct: 201 LKQFLQVMVEAARSSLKQNSMPLPPWRSLDYLEAKWQSSYQRQFNPDGESIKNGISSDHK 260

Query: 851 QCIGHLWRLKSSLQVEIDAERLLKPLLNDNNQRVKLEKWRHTS 979
           QC  HL RL+ +LQ+E++AERLLKP+ +DNN R+K  + RH+S
Sbjct: 261 QCSEHLKRLQHALQLEVEAERLLKPINSDNNWRLKPGRRRHSS 303


>ref|XP_002530865.1| conserved hypothetical protein [Ricinus communis]
           gi|223529589|gb|EEF31539.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 307

 Score =  360 bits (923), Expect = 6e-97
 Identities = 186/303 (61%), Positives = 223/303 (73%), Gaps = 2/303 (0%)
 Frame = +2

Query: 74  WWGVKMVGDGERKFVDKIGGGFSHESEHDLALMVSDFLENGSGGAXXXXXXXXXXXXNGL 253
           WWG  + G        +IGGG+SHESEHDLALMVSDFLENG  G+            +G 
Sbjct: 10  WWGRGITG--------QIGGGYSHESEHDLALMVSDFLENG--GSSGPDSWCSSDSDSGF 59

Query: 254 SDLAYLAERILHYKRTVDQCESNLLAVVHSLICAINETDLHFVHSGACNARCIRFCLVKL 433
           SDL +LA++I  Y+ +V Q ES+LL++V SL+ +I E DLH V SG+CNA CIRF LVKL
Sbjct: 60  SDLHFLADKISFYRHSVTQYESDLLSLVQSLLVSIKEADLHLVKSGSCNASCIRFSLVKL 119

Query: 434 LRSSGYDAAVCVSKWQNCGKVPGGDHEYIDVVTHSD--GGGSKRFIIDIDFRSHFEIARA 607
           LR +GYDAAVCVS+WQ   KVPGGDHEY+DVV  +   GG S+R IIDIDFRSHFEIARA
Sbjct: 120 LRLAGYDAAVCVSRWQGSSKVPGGDHEYVDVVNGNINIGGSSERLIIDIDFRSHFEIARA 179

Query: 608 VESYDTVLGSLPVAFVGYLSKLKQLLPVMVEAARSSLKKNSMPFPPWRSLAYLQAKWHST 787
           V+SYD +L SLPV +VG L++LKQ L VMVEAA+SSLK+NSMP PPWRSLAYLQAKWHS 
Sbjct: 180 VDSYDRILKSLPVVYVGSLNRLKQYLQVMVEAAKSSLKQNSMPLPPWRSLAYLQAKWHSP 239

Query: 788 YQRKISPDEPRTRETTNFSRKQCIGHLWRLKSSLQVEIDAERLLKPLLNDNNQRVKLEKW 967
           YQR +SPDE       +   KQC  HL RL+SSLQ E++ ERLLKP+  DNN R+K E+ 
Sbjct: 240 YQRHLSPDEQDFSSINSSDHKQCCEHLKRLQSSLQSEMEEERLLKPINTDNNWRMKRERR 299

Query: 968 RHT 976
           RH+
Sbjct: 300 RHS 302


>ref|XP_003518643.1| PREDICTED: uncharacterized protein LOC100780208 [Glycine max]
          Length = 308

 Score =  346 bits (887), Expect = 9e-93
 Identities = 182/307 (59%), Positives = 220/307 (71%)
 Frame = +2

Query: 62  GMDMWWGVKMVGDGERKFVDKIGGGFSHESEHDLALMVSDFLENGSGGAXXXXXXXXXXX 241
           G D+W  V++ G GE      IGGGFSHESEHDLALMVSDFLENGS GA           
Sbjct: 10  GGDLW--VRVGGGGE------IGGGFSHESEHDLALMVSDFLENGSSGAESWCSSDSD-- 59

Query: 242 XNGLSDLAYLAERILHYKRTVDQCESNLLAVVHSLICAINETDLHFVHSGACNARCIRFC 421
            +G SD A LAERI   K +V Q ES+LL+VVHSLI ++NET+L  ++SG C A CIRF 
Sbjct: 60  -SGHSDFAQLAERIQICKLSVAQHESDLLSVVHSLIRSMNETNLQVMNSGPCYASCIRFY 118

Query: 422 LVKLLRSSGYDAAVCVSKWQNCGKVPGGDHEYIDVVTHSDGGGSKRFIIDIDFRSHFEIA 601
           LVKL+R SGYDA VC SKWQ  GKVPGGDHEYID++  ++ G S+R I+DIDFRSHFEIA
Sbjct: 119 LVKLMRLSGYDAGVCASKWQGSGKVPGGDHEYIDIIIDNNSGSSERLIVDIDFRSHFEIA 178

Query: 602 RAVESYDTVLGSLPVAFVGYLSKLKQLLPVMVEAARSSLKKNSMPFPPWRSLAYLQAKWH 781
           RAV+SYD +L SLPV +VG  ++LKQ L +M EA RSSLK+NSMP PPWRSLAYLQAKW 
Sbjct: 179 RAVDSYDRILNSLPVVYVGSFTRLKQFLGIMEEATRSSLKQNSMPLPPWRSLAYLQAKWQ 238

Query: 782 STYQRKISPDEPRTRETTNFSRKQCIGHLWRLKSSLQVEIDAERLLKPLLNDNNQRVKLE 961
           S Y+R    +     ++  F  KQC GHL RL+S LQ  I+ +RLLKP  +++N R+K E
Sbjct: 239 SPYERYTHSEGNNISDSDCFDHKQCCGHLKRLQSCLQSGIEIDRLLKPRNSESNWRMKPE 298

Query: 962 KWRHTSF 982
           +WRH  F
Sbjct: 299 RWRHPLF 305


>ref|XP_004156706.1| PREDICTED: uncharacterized LOC101214727 [Cucumis sativus]
          Length = 311

 Score =  345 bits (886), Expect = 1e-92
 Identities = 183/309 (59%), Positives = 224/309 (72%), Gaps = 4/309 (1%)
 Frame = +2

Query: 62  GMDMWW--GVKMVGDGERKFVDKIGGGFSHESEHDLALMVSDFLENGSGGAXXXXXXXXX 235
           G D+W   G ++ G G+        GGFSHESEHDLALMVSDFLENGSGG          
Sbjct: 9   GGDLWVKVGARVGGVGQM-------GGFSHESEHDLALMVSDFLENGSGGGDSWCSSDSD 61

Query: 236 XXXNGLSDLAYLAERILHYKRTVDQCESNLLAVVHSLICAINETDLHFVHSGACNARCIR 415
              +G+SDLA+LAE+I+ YK  V Q ES+LL+VVHSL  ++NE DL+   +G CNA CIR
Sbjct: 62  ---SGVSDLAHLAEKIVFYKNPVSQYESDLLSVVHSLTLSMNEKDLNMNKAGPCNASCIR 118

Query: 416 FCLVKLLRSSGYDAAVCVSKWQNCGKVPGGDHEYIDVVTHSDGGGSKRFIIDIDFRSHFE 595
           F LVKLLR SGYDAAVC ++WQ  GKVPGGDHEYIDVV ++  G S+R I+DIDFRSHFE
Sbjct: 119 FVLVKLLRRSGYDAAVCTTRWQGAGKVPGGDHEYIDVVNYT-SGSSERLIVDIDFRSHFE 177

Query: 596 IARAVESYDTVLGSLPVAFVGYLSKLKQLLPVMVEAARSSLKKNSMPFPPWRSLAYLQAK 775
           IARAVESYD +L SLPV +VG L +LK  L +MVEAA+SSLK NSMP PPWRSLAYLQAK
Sbjct: 178 IARAVESYDRILNSLPVIYVGSLPRLKHFLQIMVEAAKSSLKLNSMPLPPWRSLAYLQAK 237

Query: 776 WHSTYQRKISPDEPRTRETTN--FSRKQCIGHLWRLKSSLQVEIDAERLLKPLLNDNNQR 949
           W S  QR + P+E +   + +   S KQCIGHL RL+S LQ EI+ +R L+P+  DN ++
Sbjct: 238 WQSPCQRMLHPEEQQQLGSRDMLMSHKQCIGHLKRLQSVLQSEIETDRFLRPVNGDNIRK 297

Query: 950 VKLEKWRHT 976
           +K E+ RH+
Sbjct: 298 IKSERRRHS 306


>emb|CBI31683.3| unnamed protein product [Vitis vinifera]
          Length = 272

 Score =  345 bits (886), Expect = 1e-92
 Identities = 172/271 (63%), Positives = 209/271 (77%)
 Frame = +2

Query: 167 LMVSDFLENGSGGAXXXXXXXXXXXXNGLSDLAYLAERILHYKRTVDQCESNLLAVVHSL 346
           +MVSDFLENGS GA            +G SDLA+L E+I  YK ++D+ ES+LL++VHS 
Sbjct: 1   MMVSDFLENGSVGAESCCSSDSD---SGFSDLAFLPEKISFYKHSMDRYESDLLSMVHSF 57

Query: 347 ICAINETDLHFVHSGACNARCIRFCLVKLLRSSGYDAAVCVSKWQNCGKVPGGDHEYIDV 526
           + +INETDLHFV+SG CN  CIRFCLVK LR SGYDAAVC S+WQ CGKVPGGDHEYIDV
Sbjct: 58  MLSINETDLHFVNSGPCNTSCIRFCLVKRLRLSGYDAAVCSSRWQGCGKVPGGDHEYIDV 117

Query: 527 VTHSDGGGSKRFIIDIDFRSHFEIARAVESYDTVLGSLPVAFVGYLSKLKQLLPVMVEAA 706
           V + D G ++R IIDIDFRSHFEIARAVESYD +L SLPV +VG L+KLKQ L VMVEAA
Sbjct: 118 VNYKDNGSTERLIIDIDFRSHFEIARAVESYDRILSSLPVIYVGSLTKLKQFLQVMVEAA 177

Query: 707 RSSLKKNSMPFPPWRSLAYLQAKWHSTYQRKISPDEPRTRETTNFSRKQCIGHLWRLKSS 886
           RSSLK+NSMP PPWRSL YL+AKW S+YQR+ +PD    +   +   KQC  HL RL+ +
Sbjct: 178 RSSLKQNSMPLPPWRSLDYLEAKWQSSYQRQFNPDGESIKNGISSDHKQCSEHLKRLQHA 237

Query: 887 LQVEIDAERLLKPLLNDNNQRVKLEKWRHTS 979
           LQ+E++AERLLKP+ +DNN R+K  + RH+S
Sbjct: 238 LQLEVEAERLLKPINSDNNWRLKPGRRRHSS 268


Top