BLASTX nr result
ID: Coptis25_contig00015929
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00015929
(1615 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273487.1| PREDICTED: uncharacterized protein LOC100243... 441 e-121
ref|XP_002307061.1| predicted protein [Populus trichocarpa] gi|2... 424 e-116
ref|XP_002310542.1| predicted protein [Populus trichocarpa] gi|2... 416 e-113
ref|NP_568206.1| RING/FYVE/PHD zinc finger-containing protein [A... 407 e-111
ref|NP_001078548.1| RING/FYVE/PHD zinc finger-containing protein... 407 e-111
>ref|XP_002273487.1| PREDICTED: uncharacterized protein LOC100243998 [Vitis vinifera]
Length = 365
Score = 441 bits (1134), Expect = e-121
Identities = 217/352 (61%), Positives = 271/352 (76%), Gaps = 1/352 (0%)
Frame = -3
Query: 1571 TNDGFPSTIKTESVVTYQAARDSTYKDGGLPICRVCQCSESDSKGEAALGYLDIFPPLQE 1392
+++G P ES V + R S K+ GL CRVCQC+ESD +GEAALG+L I PP+QE
Sbjct: 15 SHEGHPYIENEESGVC--STRHSIDKEAGLATCRVCQCAESDRRGEAALGFLGITPPVQE 72
Query: 1391 LPKTDVDRRSNSKDTPKFGKRDTIHARTSLQKAGVLEFVNTEGEVFICTTDIEAGSYTHQ 1212
K+D ++NSK+ K + + +++ +EFV+ +GEVFIC TDIE GS HQ
Sbjct: 73 ARKSDELIKTNSKEVLKEAEDYASPTKNGRRESDFVEFVSPQGEVFICNTDIEMGSCHHQ 132
Query: 1211 DTVIDLGCSCKNDLALAHYACALKWFINHGSTVCEICESVAKNIRLSDFKKVVTSLKEYE 1032
DT+I+LGCSCKNDLAL HYACALKWF+NHGST+CEIC +AKN+R SDFKKVV SLKEYE
Sbjct: 133 DTLIELGCSCKNDLALVHYACALKWFVNHGSTICEICGCIAKNVRTSDFKKVVGSLKEYE 192
Query: 1031 SLRERTLSGERTLANVEINSGVDPVAVASVRRQRLREVSLWFTPHIFNNHTSSTTISQGG 852
+LRERT SGE + V N GVDP AVA+++RQRL E+SLWF PH NN+ +++ ++
Sbjct: 193 ALRERTASGE-PVVQVRTNLGVDPDAVAAIQRQRLSEISLWFNPHNNNNNNNNSAVASQV 251
Query: 851 LGHSN-NTLFDSALPSENCATKWAVEGTGILVATGLLTVTIAWLLAPHVGKKITKNGLHI 675
+ + N + + +P+EN ATKWAVEGTGIL+ATGLLTVT+AWL+AP VGKK K+GLHI
Sbjct: 252 VSEQHLNIVAEDFVPAENPATKWAVEGTGILLATGLLTVTLAWLIAPRVGKKTAKSGLHI 311
Query: 674 LLGGVCALTIVLFLRFIVLSRIKYGPARYWAILFVFWFLVFGIWASRTHGSH 519
LLGG+CALT+V+F RFIVL+RIKYGPARYWAILFVFWFLVFGIWASRTHG+H
Sbjct: 312 LLGGICALTVVVFFRFIVLTRIKYGPARYWAILFVFWFLVFGIWASRTHGAH 363
>ref|XP_002307061.1| predicted protein [Populus trichocarpa] gi|222856510|gb|EEE94057.1|
predicted protein [Populus trichocarpa]
Length = 368
Score = 424 bits (1089), Expect = e-116
Identities = 207/332 (62%), Positives = 257/332 (77%), Gaps = 7/332 (2%)
Frame = -3
Query: 1493 DGGLPICRVCQCSESDSKGEAALGYLDIFPPLQELPKTDVDRRSNSKDTPKFGKRDTIHA 1314
D G+ CRVCQC+ESD +G+ ALG+L I PPLQE K+ + SK+ P + D H+
Sbjct: 37 DAGIATCRVCQCAESDKRGDVALGFLGIVPPLQEARKSSGAVKPESKEVPLNAEADRFHS 96
Query: 1313 RTSLQKAGVLEFVNTEGEVFICTTD--IEAGSYTHQDTVIDLGCSCKNDLALAHYACALK 1140
+ + +++G++EF + EGEVFIC TD +E GS QD +I+LGCSCK+DLAL HYACALK
Sbjct: 97 KNTGRESGLVEFFSPEGEVFICNTDTDLELGSCHQQDLLIELGCSCKSDLALVHYACALK 156
Query: 1139 WFINHGSTVCEICESVAKNIRLSDFKKVVTSLKEYESLRERTLSGERTLANVEINSGVDP 960
WF+NHGSTVCEIC VA NIR SDFKKV+ +LK+YE+LRERT +G+ A V ++GVDP
Sbjct: 157 WFVNHGSTVCEICGHVAINIRTSDFKKVMVALKDYEALRERTATGDPNPAQVHASAGVDP 216
Query: 959 VAVASVRRQRLREVSLWFTPHIFNNHTS-----STTISQGGLGHSNNTLFDSALPSENCA 795
AVA+VRRQRL E+SLWF PH NN+T+ S +SQ NT+ + +P++N A
Sbjct: 217 DAVAAVRRQRLSEISLWFCPH--NNNTNNYNNNSAAVSQVVSEQPLNTVTEDIVPADNRA 274
Query: 794 TKWAVEGTGILVATGLLTVTIAWLLAPHVGKKITKNGLHILLGGVCALTIVLFLRFIVLS 615
TKWAVEGTGIL+ATGLLTVT+AWL+AP VGKK K+GLHILLGG+CALT+V+F RFIVL+
Sbjct: 275 TKWAVEGTGILLATGLLTVTLAWLIAPRVGKKTAKSGLHILLGGICALTVVIFFRFIVLT 334
Query: 614 RIKYGPARYWAILFVFWFLVFGIWASRTHGSH 519
RIKYGPARYWAILFVFWFLVFGIWASRTH +H
Sbjct: 335 RIKYGPARYWAILFVFWFLVFGIWASRTHDAH 366
>ref|XP_002310542.1| predicted protein [Populus trichocarpa] gi|222853445|gb|EEE90992.1|
predicted protein [Populus trichocarpa]
Length = 367
Score = 416 bits (1068), Expect = e-113
Identities = 205/333 (61%), Positives = 255/333 (76%), Gaps = 8/333 (2%)
Frame = -3
Query: 1493 DGGLPICRVCQCSESDSKGEAALGYLDIFPPLQELPKTDVDRRSNSKDTPKFGKRDTIHA 1314
D G+P CRVCQC+ES+ +G+ ALG+L I PPLQE K++ + S++ P + H+
Sbjct: 36 DAGMPTCRVCQCAESEKRGDVALGFLGIVPPLQEARKSNGAVKPESREVPLDAEAGQFHS 95
Query: 1313 RTSLQKAGVLEFVNTEGEVFICTTD--IEAGSYTHQDTVIDLGCSCKNDLALAHYACALK 1140
+ + +++G++EF++ GEVFIC TD +E G QD +I+LGCSCKNDLAL HYACALK
Sbjct: 96 KNTGRESGLVEFISPGGEVFICNTDTDLEVGLCHQQDLLIELGCSCKNDLALVHYACALK 155
Query: 1139 WFINHGSTVCEICESVAKNIRLSDFKKVVTSLKEYESLRERTLSGERTLANVEINSGVDP 960
WF+NHGSTVCEIC VA NIR DFKKV+ +LK+YE+LRERT G+ A V ++GVDP
Sbjct: 156 WFVNHGSTVCEICGHVAINIRTLDFKKVMVALKDYEALRERTAIGDPNPAQVHTSAGVDP 215
Query: 959 VAVASVRRQRLREVSLWFTPHIFNNHTS------STTISQGGLGHSNNTLFDSALPSENC 798
AVA+VRRQRL E+SLWF+PH NNH + ST +SQ NT+ + +P+EN
Sbjct: 216 DAVAAVRRQRLSEISLWFSPH--NNHNNNYNNNNSTAVSQVVSEQPLNTVMED-VPAENP 272
Query: 797 ATKWAVEGTGILVATGLLTVTIAWLLAPHVGKKITKNGLHILLGGVCALTIVLFLRFIVL 618
ATKWAVE TGIL+ATGLLTVT+AWL+AP VGKK K+GLHILLGGVCALT+V+F RFIVL
Sbjct: 273 ATKWAVEATGILLATGLLTVTLAWLIAPRVGKKTAKSGLHILLGGVCALTVVVFFRFIVL 332
Query: 617 SRIKYGPARYWAILFVFWFLVFGIWASRTHGSH 519
+RIKYGPARYWAILFVFWFLVFGIWASRTH +H
Sbjct: 333 TRIKYGPARYWAILFVFWFLVFGIWASRTHDAH 365
>ref|NP_568206.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]
gi|145334331|ref|NP_001078547.1| RING/FYVE/PHD zinc
finger-containing protein [Arabidopsis thaliana]
gi|13548333|emb|CAC35880.1| putative protein [Arabidopsis
thaliana] gi|26451043|dbj|BAC42627.1| unknown protein
[Arabidopsis thaliana] gi|94442419|gb|ABF18997.1|
At5g08750 [Arabidopsis thaliana]
gi|332003961|gb|AED91344.1| RING/FYVE/PHD zinc
finger-containing protein [Arabidopsis thaliana]
gi|332003962|gb|AED91345.1| RING/FYVE/PHD zinc
finger-containing protein [Arabidopsis thaliana]
Length = 363
Score = 407 bits (1047), Expect = e-111
Identities = 212/378 (56%), Positives = 272/378 (71%), Gaps = 13/378 (3%)
Frame = -3
Query: 1610 REVELQTTDDGLTTNDGFPSTIKTESVVTYQAARDSTYKDGGLPICRVCQCSESDSKGEA 1431
+E +L+TTD G++ + P IK E ++A R S+ KD GLP CRVCQC+ESD +G+A
Sbjct: 3 KENQLETTDCGVSDHGSPP--IKNEE---HEAPRYSSDKDTGLPTCRVCQCAESDRRGDA 57
Query: 1430 ALGYLDIFPPLQELPKTDVDRRSNSKDTPKFGKRDTIHARTSLQKA-GVLEFVNTEGEVF 1254
ALG+L I PP+ E RRSN+ + +T+ R+S+ K+ G +E ++ +GEVF
Sbjct: 58 ALGFLGITPPVSE------PRRSNAGE-------ETVDQRSSVVKSSGFIELISPDGEVF 104
Query: 1253 ICTTD-IEAGSYTHQDTVIDLGCSCKNDLALAHYACALKWFINHGSTVCEICESVAKNIR 1077
+C D IE G++ H+D +++LGCSCKNDLAL HYACALKWF+NHGSTVCEIC +NIR
Sbjct: 105 VCANDDIEMGAWQHRDKLLELGCSCKNDLALVHYACALKWFVNHGSTVCEICGKTTENIR 164
Query: 1076 LSDFKKVVTSLKEYESLRERTLSGERTLANVEIN---SGVDPVAVASVRRQRLREVSLWF 906
DF KVV +LK+Y +LRERT G+ V N SG+DP AVA++RRQRL E+SLWF
Sbjct: 165 TVDFNKVVIALKDYAALRERTADGDPNPVVVNNNTSSSGIDPDAVAAIRRQRLSEISLWF 224
Query: 905 TPHIFNNHTSSTTISQGGLGHSNNTL--------FDSALPSENCATKWAVEGTGILVATG 750
PH N+ +S+ + G S T FD LP E+ ATKWAVEGTGIL+ATG
Sbjct: 225 GPHCSTNNNNSSNSAAAGTASSQVTSEQPVGIVNFD-ILPMESRATKWAVEGTGILLATG 283
Query: 749 LLTVTIAWLLAPHVGKKITKNGLHILLGGVCALTIVLFLRFIVLSRIKYGPARYWAILFV 570
LLTVT+AWL+AP VGK+ K+GLHILLGG+CALT+V+F RF+VL+RI+YGPARYWAILFV
Sbjct: 284 LLTVTLAWLIAPRVGKRTAKSGLHILLGGLCALTVVIFFRFVVLTRIRYGPARYWAILFV 343
Query: 569 FWFLVFGIWASRTHGSHA 516
FWFLVFGIWASR+H SH+
Sbjct: 344 FWFLVFGIWASRSHASHS 361
>ref|NP_001078548.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]
gi|332003963|gb|AED91346.1| RING/FYVE/PHD zinc
finger-containing protein [Arabidopsis thaliana]
Length = 370
Score = 407 bits (1047), Expect = e-111
Identities = 212/378 (56%), Positives = 272/378 (71%), Gaps = 13/378 (3%)
Frame = -3
Query: 1610 REVELQTTDDGLTTNDGFPSTIKTESVVTYQAARDSTYKDGGLPICRVCQCSESDSKGEA 1431
+E +L+TTD G++ + P IK E ++A R S+ KD GLP CRVCQC+ESD +G+A
Sbjct: 10 KENQLETTDCGVSDHGSPP--IKNEE---HEAPRYSSDKDTGLPTCRVCQCAESDRRGDA 64
Query: 1430 ALGYLDIFPPLQELPKTDVDRRSNSKDTPKFGKRDTIHARTSLQKA-GVLEFVNTEGEVF 1254
ALG+L I PP+ E RRSN+ + +T+ R+S+ K+ G +E ++ +GEVF
Sbjct: 65 ALGFLGITPPVSE------PRRSNAGE-------ETVDQRSSVVKSSGFIELISPDGEVF 111
Query: 1253 ICTTD-IEAGSYTHQDTVIDLGCSCKNDLALAHYACALKWFINHGSTVCEICESVAKNIR 1077
+C D IE G++ H+D +++LGCSCKNDLAL HYACALKWF+NHGSTVCEIC +NIR
Sbjct: 112 VCANDDIEMGAWQHRDKLLELGCSCKNDLALVHYACALKWFVNHGSTVCEICGKTTENIR 171
Query: 1076 LSDFKKVVTSLKEYESLRERTLSGERTLANVEIN---SGVDPVAVASVRRQRLREVSLWF 906
DF KVV +LK+Y +LRERT G+ V N SG+DP AVA++RRQRL E+SLWF
Sbjct: 172 TVDFNKVVIALKDYAALRERTADGDPNPVVVNNNTSSSGIDPDAVAAIRRQRLSEISLWF 231
Query: 905 TPHIFNNHTSSTTISQGGLGHSNNTL--------FDSALPSENCATKWAVEGTGILVATG 750
PH N+ +S+ + G S T FD LP E+ ATKWAVEGTGIL+ATG
Sbjct: 232 GPHCSTNNNNSSNSAAAGTASSQVTSEQPVGIVNFD-ILPMESRATKWAVEGTGILLATG 290
Query: 749 LLTVTIAWLLAPHVGKKITKNGLHILLGGVCALTIVLFLRFIVLSRIKYGPARYWAILFV 570
LLTVT+AWL+AP VGK+ K+GLHILLGG+CALT+V+F RF+VL+RI+YGPARYWAILFV
Sbjct: 291 LLTVTLAWLIAPRVGKRTAKSGLHILLGGLCALTVVIFFRFVVLTRIRYGPARYWAILFV 350
Query: 569 FWFLVFGIWASRTHGSHA 516
FWFLVFGIWASR+H SH+
Sbjct: 351 FWFLVFGIWASRSHASHS 368