BLASTX nr result

ID: Coptis25_contig00015926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015926
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263358.1| PREDICTED: putative 1-aminocyclopropane-1-ca...   245   3e-63
ref|XP_003525175.1| PREDICTED: putative 1-aminocyclopropane-1-ca...   238   3e-61
ref|NP_001234368.1| D-cysteine desulfhydrase [Solanum lycopersic...   231   6e-59
gb|AFK42354.1| unknown [Lotus japonicus]                              230   1e-58
ref|XP_002454633.1| hypothetical protein SORBIDRAFT_04g034640 [S...   228   4e-58

>ref|XP_002263358.1| PREDICTED: putative 1-aminocyclopropane-1-carboxylate deaminase
           [Vitis vinifera] gi|296088811|emb|CBI38261.3| unnamed
           protein product [Vitis vinifera]
          Length = 381

 Score =  245 bits (625), Expect = 3e-63
 Identities = 121/164 (73%), Positives = 130/164 (79%)
 Frame = -2

Query: 493 TFGFLTQKPYSPPSWAQHLHPIPSHVFSLAHVPTPIHRWNLPNLPKNVELWIKXXXXXXX 314
           +F FLT+KPY+PPSWA HL PIPSHVFSLAHVPTPIH+WNLPNLPKN +LWIK       
Sbjct: 8   SFDFLTKKPYAPPSWASHLSPIPSHVFSLAHVPTPIHKWNLPNLPKNTQLWIK------- 60

Query: 313 XXXXXXXXXXXXXXXXXXXXXXRDDLSGMQLSGNKVRKLEFLMAEAVAQGADCIITIGGI 134
                                 RDDLSGMQ+SGNKVRKLEFLMA+AVAQG+DCIITIGGI
Sbjct: 61  ----------------------RDDLSGMQMSGNKVRKLEFLMADAVAQGSDCIITIGGI 98

Query: 133 QSNHCRATAVAAKYLNLDCYLILRTSKILVDNDPGLTGNLLVER 2
           QSNHCRATAVAAKYLNLDCYLILRTSK+LVD DPGLTGNLLVER
Sbjct: 99  QSNHCRATAVAAKYLNLDCYLILRTSKVLVDKDPGLTGNLLVER 142


>ref|XP_003525175.1| PREDICTED: putative 1-aminocyclopropane-1-carboxylate
           deaminase-like [Glycine max]
          Length = 379

 Score =  238 bits (608), Expect = 3e-61
 Identities = 119/163 (73%), Positives = 126/163 (77%)
 Frame = -2

Query: 490 FGFLTQKPYSPPSWAQHLHPIPSHVFSLAHVPTPIHRWNLPNLPKNVELWIKXXXXXXXX 311
           F FLT+KPYSPPSWA HLHP+PSH FSLAH+PTPIHRWNLPNLP N ELWIK        
Sbjct: 7   FEFLTKKPYSPPSWASHLHPLPSHFFSLAHLPTPIHRWNLPNLPTNTELWIK-------- 58

Query: 310 XXXXXXXXXXXXXXXXXXXXXRDDLSGMQLSGNKVRKLEFLMAEAVAQGADCIITIGGIQ 131
                                RDDLSGMQLSGNKVRKLEFLMA+A+AQGAD IITIGGIQ
Sbjct: 59  ---------------------RDDLSGMQLSGNKVRKLEFLMADAIAQGADSIITIGGIQ 97

Query: 130 SNHCRATAVAAKYLNLDCYLILRTSKILVDNDPGLTGNLLVER 2
           SNHCRATAVAAKYLNLDC+LILRTS +LVD DPGLTGNLLVER
Sbjct: 98  SNHCRATAVAAKYLNLDCFLILRTSDLLVDQDPGLTGNLLVER 140


>ref|NP_001234368.1| D-cysteine desulfhydrase [Solanum lycopersicum]
           gi|186920269|gb|ACC95419.1| D-cysteine desulfhydrase
           [Solanum lycopersicum]
          Length = 425

 Score =  231 bits (588), Expect = 6e-59
 Identities = 113/166 (68%), Positives = 124/166 (74%)
 Frame = -2

Query: 499 EQTFGFLTQKPYSPPSWAQHLHPIPSHVFSLAHVPTPIHRWNLPNLPKNVELWIKXXXXX 320
           +  F FLT+KPY PP WA  L PIPSH FSL H PTPIH+WNLPNLPKN E+W+K     
Sbjct: 50  QSAFQFLTKKPYEPPPWASLLSPIPSHTFSLGHFPTPIHKWNLPNLPKNTEVWLK----- 104

Query: 319 XXXXXXXXXXXXXXXXXXXXXXXXRDDLSGMQLSGNKVRKLEFLMAEAVAQGADCIITIG 140
                                   RDD+SGMQLSGNKVRKLEFL+A+AVAQGADCI+TIG
Sbjct: 105 ------------------------RDDMSGMQLSGNKVRKLEFLLADAVAQGADCIVTIG 140

Query: 139 GIQSNHCRATAVAAKYLNLDCYLILRTSKILVDNDPGLTGNLLVER 2
           GIQSNHCRATAVAAKYLNLDCYLILRTSK+LVD DPGLTGNLLV+R
Sbjct: 141 GIQSNHCRATAVAAKYLNLDCYLILRTSKLLVDKDPGLTGNLLVDR 186


>gb|AFK42354.1| unknown [Lotus japonicus]
          Length = 381

 Score =  230 bits (586), Expect = 1e-58
 Identities = 113/164 (68%), Positives = 126/164 (76%)
 Frame = -2

Query: 493 TFGFLTQKPYSPPSWAQHLHPIPSHVFSLAHVPTPIHRWNLPNLPKNVELWIKXXXXXXX 314
           +F FL+ KPY+PPSWA HLHP+PSH+FSLAH+PTPIHRWNLPNLP N E+W+K       
Sbjct: 5   SFDFLSVKPYTPPSWASHLHPLPSHIFSLAHLPTPIHRWNLPNLPANTEVWLKILQ---- 60

Query: 313 XXXXXXXXXXXXXXXXXXXXXXRDDLSGMQLSGNKVRKLEFLMAEAVAQGADCIITIGGI 134
                                 RDDLSGMQLSGNKVRKLEFLMA+A+AQGAD +ITIGGI
Sbjct: 61  ----------------------RDDLSGMQLSGNKVRKLEFLMADAIAQGADSVITIGGI 98

Query: 133 QSNHCRATAVAAKYLNLDCYLILRTSKILVDNDPGLTGNLLVER 2
           QSNHCRATAVAAKYLNLD +LILRTSK+LVD DPGL GNLLVER
Sbjct: 99  QSNHCRATAVAAKYLNLDPFLILRTSKLLVDQDPGLIGNLLVER 142


>ref|XP_002454633.1| hypothetical protein SORBIDRAFT_04g034640 [Sorghum bicolor]
           gi|241934464|gb|EES07609.1| hypothetical protein
           SORBIDRAFT_04g034640 [Sorghum bicolor]
          Length = 395

 Score =  228 bits (581), Expect = 4e-58
 Identities = 112/165 (67%), Positives = 124/165 (75%)
 Frame = -2

Query: 496 QTFGFLTQKPYSPPSWAQHLHPIPSHVFSLAHVPTPIHRWNLPNLPKNVELWIKXXXXXX 317
           Q  GFL++KPY+PPSWA HL P+PSH FSL   PTPIH+WNLPNLP+  E+WIK      
Sbjct: 22  QIGGFLSKKPYAPPSWATHLSPMPSHTFSLGQFPTPIHKWNLPNLPEGTEVWIK------ 75

Query: 316 XXXXXXXXXXXXXXXXXXXXXXXRDDLSGMQLSGNKVRKLEFLMAEAVAQGADCIITIGG 137
                                  RDDLSGMQLSGNKVRKLEFL+A+AVAQGADC+IT+GG
Sbjct: 76  -----------------------RDDLSGMQLSGNKVRKLEFLLADAVAQGADCVITVGG 112

Query: 136 IQSNHCRATAVAAKYLNLDCYLILRTSKILVDNDPGLTGNLLVER 2
           IQSNHCRATAVAAKYLNLDCYLILRTSK+LVD DPGL GNLLVER
Sbjct: 113 IQSNHCRATAVAAKYLNLDCYLILRTSKLLVDKDPGLVGNLLVER 157


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