BLASTX nr result
ID: Coptis25_contig00015913
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00015913
(1077 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004138434.1| PREDICTED: pollen-specific protein SF3-like ... 253 4e-96
gb|ABK58469.1| LIM domain protein WLIM2a [Populus tremula x Popu... 252 5e-94
ref|XP_002312139.1| predicted protein [Populus trichocarpa] gi|1... 253 7e-94
gb|AAD56951.1|AF184886_1 LIM domain protein WLIM2 [Nicotiana tab... 251 7e-94
gb|ACX47456.1| LIM1 [Hevea brasiliensis] 252 9e-94
>ref|XP_004138434.1| PREDICTED: pollen-specific protein SF3-like [Cucumis sativus]
gi|449516649|ref|XP_004165359.1| PREDICTED:
pollen-specific protein SF3-like [Cucumis sativus]
Length = 189
Score = 253 bits (647), Expect(2) = 4e-96
Identities = 116/135 (85%), Positives = 128/135 (94%)
Frame = +1
Query: 433 LYCKPHFEQLFKESGNFNRNFQSPLTKSVSKLTPELTRSPSKAAGMFSGTQEKCATCGKT 612
LYCKPHFEQLFKE+GNFN+NFQSP KS KLTPELTRSPSKAAGMFSGTQ+KCATCGKT
Sbjct: 56 LYCKPHFEQLFKETGNFNKNFQSP-AKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKT 114
Query: 613 AYPLEKVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLI 792
YPLEKVTVE+Q+YHKSCFKCSHGGC+LSPSNYAAL+GILYCKHHFSQLFKEKGSYNHLI
Sbjct: 115 VYPLEKVTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLI 174
Query: 793 KSASIRRAPTPIPDA 837
KSAS++R+ P+P+A
Sbjct: 175 KSASMKRSAAPVPEA 189
Score = 125 bits (314), Expect(2) = 4e-96
Identities = 55/61 (90%), Positives = 59/61 (96%)
Frame = +2
Query: 191 MSFIGTQEKCKVCEKTVYVMDQLSADGVSYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 370
MSFIGTQ+KCK CEKTVY ++QLSADGVSYHKSCFKC+HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1 MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
Query: 371 H 373
H
Sbjct: 61 H 61
Score = 99.0 bits (245), Expect = 2e-18
Identities = 41/76 (53%), Positives = 57/76 (75%)
Frame = +1
Query: 571 FSGTQEKCATCGKTAYPLEKVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHF 750
F GTQ+KC C KT YP+E+++ + +YHKSCFKCSH +L SNY++++G+LYCK HF
Sbjct: 3 FIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHF 62
Query: 751 SQLFKEKGSYNHLIKS 798
QLFKE G++N +S
Sbjct: 63 EQLFKETGNFNKNFQS 78
Score = 79.0 bits (193), Expect = 2e-12
Identities = 32/59 (54%), Positives = 44/59 (74%)
Frame = +2
Query: 197 FIGTQEKCKVCEKTVYVMDQLSADGVSYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKPH 373
F GTQ+KC C KTVY +++++ + SYHKSCFKC+H L SNY+++EG+LYCK H
Sbjct: 101 FSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHH 159
>gb|ABK58469.1| LIM domain protein WLIM2a [Populus tremula x Populus alba]
Length = 189
Score = 252 bits (643), Expect(2) = 5e-94
Identities = 114/135 (84%), Positives = 129/135 (95%)
Frame = +1
Query: 433 LYCKPHFEQLFKESGNFNRNFQSPLTKSVSKLTPELTRSPSKAAGMFSGTQEKCATCGKT 612
LYCKPHF+QLFKE+GNFN+NFQSP K+ KLTPELTRSPSKAAGMFSGTQEKCATCGKT
Sbjct: 56 LYCKPHFDQLFKETGNFNKNFQSP-AKTAEKLTPELTRSPSKAAGMFSGTQEKCATCGKT 114
Query: 613 AYPLEKVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLI 792
AYPLEKVTVE+QAYHKSCFKCSHGGC+++PS+YAAL+G+LYCKHHFSQLFKEKGSYNHLI
Sbjct: 115 AYPLEKVTVESQAYHKSCFKCSHGGCAITPSSYAALEGVLYCKHHFSQLFKEKGSYNHLI 174
Query: 793 KSASIRRAPTPIPDA 837
KSAS++RA P+P+A
Sbjct: 175 KSASMKRAAAPVPEA 189
Score = 120 bits (300), Expect(2) = 5e-94
Identities = 53/61 (86%), Positives = 56/61 (91%)
Frame = +2
Query: 191 MSFIGTQEKCKVCEKTVYVMDQLSADGVSYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 370
MSF GTQ+KCK CEKTVY M+ LSADGV+YHKSCFKC HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1 MSFTGTQQKCKACEKTVYPMELLSADGVAYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKP 60
Query: 371 H 373
H
Sbjct: 61 H 61
Score = 98.2 bits (243), Expect = 3e-18
Identities = 41/76 (53%), Positives = 56/76 (73%)
Frame = +1
Query: 571 FSGTQEKCATCGKTAYPLEKVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHF 750
F+GTQ+KC C KT YP+E ++ + AYHKSCFKC H +L SNY++++G+LYCK HF
Sbjct: 3 FTGTQQKCKACEKTVYPMELLSADGVAYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKPHF 62
Query: 751 SQLFKEKGSYNHLIKS 798
QLFKE G++N +S
Sbjct: 63 DQLFKETGNFNKNFQS 78
Score = 74.7 bits (182), Expect = 4e-11
Identities = 30/59 (50%), Positives = 43/59 (72%)
Frame = +2
Query: 197 FIGTQEKCKVCEKTVYVMDQLSADGVSYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKPH 373
F GTQEKC C KT Y +++++ + +YHKSCFKC+H + S+Y+++EGVLYCK H
Sbjct: 101 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCAITPSSYAALEGVLYCKHH 159
>ref|XP_002312139.1| predicted protein [Populus trichocarpa] gi|118485190|gb|ABK94456.1|
unknown [Populus trichocarpa]
gi|222851959|gb|EEE89506.1| predicted protein [Populus
trichocarpa]
Length = 189
Score = 253 bits (646), Expect(2) = 7e-94
Identities = 115/135 (85%), Positives = 128/135 (94%)
Frame = +1
Query: 433 LYCKPHFEQLFKESGNFNRNFQSPLTKSVSKLTPELTRSPSKAAGMFSGTQEKCATCGKT 612
LYCKPHF+QLFKE+GNFN+NFQSP KS KLTPELTRSPSKAAGMFSGTQEKCATCGKT
Sbjct: 56 LYCKPHFDQLFKETGNFNKNFQSP-AKSAEKLTPELTRSPSKAAGMFSGTQEKCATCGKT 114
Query: 613 AYPLEKVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLI 792
AYPLEKVTVE+QAYHKSCFKCSHGGC+++PSNYAAL+G+LYCKHHFSQLFKEKGSYNHLI
Sbjct: 115 AYPLEKVTVESQAYHKSCFKCSHGGCAITPSNYAALEGVLYCKHHFSQLFKEKGSYNHLI 174
Query: 793 KSASIRRAPTPIPDA 837
K AS++RA P+P+A
Sbjct: 175 KCASMKRAAAPVPEA 189
Score = 118 bits (296), Expect(2) = 7e-94
Identities = 52/61 (85%), Positives = 55/61 (90%)
Frame = +2
Query: 191 MSFIGTQEKCKVCEKTVYVMDQLSADGVSYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 370
MSF GTQ+KCK CEKTVY M+ LS DGV+YHKSCFKC HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1 MSFTGTQQKCKACEKTVYPMELLSTDGVAYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKP 60
Query: 371 H 373
H
Sbjct: 61 H 61
Score = 98.2 bits (243), Expect = 3e-18
Identities = 41/76 (53%), Positives = 56/76 (73%)
Frame = +1
Query: 571 FSGTQEKCATCGKTAYPLEKVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHF 750
F+GTQ+KC C KT YP+E ++ + AYHKSCFKC H +L SNY++++G+LYCK HF
Sbjct: 3 FTGTQQKCKACEKTVYPMELLSTDGVAYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKPHF 62
Query: 751 SQLFKEKGSYNHLIKS 798
QLFKE G++N +S
Sbjct: 63 DQLFKETGNFNKNFQS 78
Score = 76.6 bits (187), Expect = 1e-11
Identities = 31/59 (52%), Positives = 43/59 (72%)
Frame = +2
Query: 197 FIGTQEKCKVCEKTVYVMDQLSADGVSYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKPH 373
F GTQEKC C KT Y +++++ + +YHKSCFKC+H + SNY+++EGVLYCK H
Sbjct: 101 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCAITPSNYAALEGVLYCKHH 159
>gb|AAD56951.1|AF184886_1 LIM domain protein WLIM2 [Nicotiana tabacum]
gi|1841464|emb|CAA71891.1| LIM-domain SF3 protein
[Nicotiana tabacum]
Length = 189
Score = 251 bits (642), Expect(2) = 7e-94
Identities = 118/135 (87%), Positives = 126/135 (93%)
Frame = +1
Query: 433 LYCKPHFEQLFKESGNFNRNFQSPLTKSVSKLTPELTRSPSKAAGMFSGTQEKCATCGKT 612
LYCKPHFEQLFKESGNFN+NFQSP KS KLTPELTRSPSKAAGMFSGTQEKCATCGKT
Sbjct: 56 LYCKPHFEQLFKESGNFNKNFQSP-AKSAEKLTPELTRSPSKAAGMFSGTQEKCATCGKT 114
Query: 613 AYPLEKVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLI 792
AYPLEKVTVENQ+YHK+CFKCSHGGCSLSPSNYAAL+GILYCK HFSQLFKEKGSYNHLI
Sbjct: 115 AYPLEKVTVENQSYHKTCFKCSHGGCSLSPSNYAALNGILYCKPHFSQLFKEKGSYNHLI 174
Query: 793 KSASIRRAPTPIPDA 837
KSAS++R +PD+
Sbjct: 175 KSASMKRPAATVPDS 189
Score = 120 bits (300), Expect(2) = 7e-94
Identities = 52/61 (85%), Positives = 58/61 (95%)
Frame = +2
Query: 191 MSFIGTQEKCKVCEKTVYVMDQLSADGVSYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 370
MSFIGTQ+KCK CEKTVY ++ LSADGV+YHKSCFKC+HCKGTLKLSN+SSMEGVLYCKP
Sbjct: 1 MSFIGTQQKCKACEKTVYPVELLSADGVNYHKSCFKCSHCKGTLKLSNFSSMEGVLYCKP 60
Query: 371 H 373
H
Sbjct: 61 H 61
Score = 95.5 bits (236), Expect = 2e-17
Identities = 40/76 (52%), Positives = 55/76 (72%)
Frame = +1
Query: 571 FSGTQEKCATCGKTAYPLEKVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHF 750
F GTQ+KC C KT YP+E ++ + YHKSCFKCSH +L SN+++++G+LYCK HF
Sbjct: 3 FIGTQQKCKACEKTVYPVELLSADGVNYHKSCFKCSHCKGTLKLSNFSSMEGVLYCKPHF 62
Query: 751 SQLFKEKGSYNHLIKS 798
QLFKE G++N +S
Sbjct: 63 EQLFKESGNFNKNFQS 78
Score = 79.3 bits (194), Expect = 1e-12
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = +2
Query: 197 FIGTQEKCKVCEKTVYVMDQLSADGVSYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKPH 373
F GTQEKC C KT Y +++++ + SYHK+CFKC+H +L SNY+++ G+LYCKPH
Sbjct: 101 FSGTQEKCATCGKTAYPLEKVTVENQSYHKTCFKCSHGGCSLSPSNYAALNGILYCKPH 159
>gb|ACX47456.1| LIM1 [Hevea brasiliensis]
Length = 189
Score = 252 bits (643), Expect(2) = 9e-94
Identities = 117/135 (86%), Positives = 126/135 (93%)
Frame = +1
Query: 433 LYCKPHFEQLFKESGNFNRNFQSPLTKSVSKLTPELTRSPSKAAGMFSGTQEKCATCGKT 612
LYCKPHFEQLFKE+GNFN+NFQSP KS KLTPELTRSPSKAA MFSGTQEKCATCGKT
Sbjct: 56 LYCKPHFEQLFKETGNFNKNFQSP-AKSAEKLTPELTRSPSKAASMFSGTQEKCATCGKT 114
Query: 613 AYPLEKVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLI 792
AYPLEKVTVE+QAYHKSCFKCSHGGCSLSPSNYAAL+G+LYCKHHFSQLFKEKGSYNHLI
Sbjct: 115 AYPLEKVTVESQAYHKSCFKCSHGGCSLSPSNYAALEGVLYCKHHFSQLFKEKGSYNHLI 174
Query: 793 KSASIRRAPTPIPDA 837
K AS++RA +P+A
Sbjct: 175 KCASMKRAAASVPEA 189
Score = 119 bits (298), Expect(2) = 9e-94
Identities = 53/61 (86%), Positives = 55/61 (90%)
Frame = +2
Query: 191 MSFIGTQEKCKVCEKTVYVMDQLSADGVSYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 370
MSF GTQ+KCK CEKTVY M+ LSADGV YHKSCFKC HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1 MSFTGTQQKCKACEKTVYPMELLSADGVPYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKP 60
Query: 371 H 373
H
Sbjct: 61 H 61
Score = 96.3 bits (238), Expect = 1e-17
Identities = 40/76 (52%), Positives = 55/76 (72%)
Frame = +1
Query: 571 FSGTQEKCATCGKTAYPLEKVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHF 750
F+GTQ+KC C KT YP+E ++ + YHKSCFKC H +L SNY++++G+LYCK HF
Sbjct: 3 FTGTQQKCKACEKTVYPMELLSADGVPYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKPHF 62
Query: 751 SQLFKEKGSYNHLIKS 798
QLFKE G++N +S
Sbjct: 63 EQLFKETGNFNKNFQS 78
Score = 78.2 bits (191), Expect = 3e-12
Identities = 32/59 (54%), Positives = 44/59 (74%)
Frame = +2
Query: 197 FIGTQEKCKVCEKTVYVMDQLSADGVSYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKPH 373
F GTQEKC C KT Y +++++ + +YHKSCFKC+H +L SNY+++EGVLYCK H
Sbjct: 101 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCSLSPSNYAALEGVLYCKHH 159