BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015899
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    46   4e-10
ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncat...    47   2e-09
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    44   7e-09
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    49   7e-08
ref|XP_002300154.1| predicted protein [Populus trichocarpa] gi|2...    44   3e-07

>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 46.2 bits (108), Expect(2) = 4e-10
 Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
 Frame = +2

Query: 422 PGKDRDVCLSGFGIADSSMVFK--RVLVMFSDCEDNFGKFENRVQVHTLGSTIWRKKNGV 595
           PG   D    GFG       +K  RV +  S    +    E +V+V TL S IWR    +
Sbjct: 138 PGSSEDDAFYGFGYDVKLDDYKIVRVSISTSTNSTDGSNSETKVEVFTLKSNIWRTIQDL 197

Query: 596 VPDVLRQVPEKVSVFAHGCLHWMTVDRSLPNGEPIIVSFNLGVEEF 733
              VL + P      A+G LHW+    +  + + ++VSF+L  E+F
Sbjct: 198 RCSVLLEGP---GTLANGALHWLVRQENGGSKKCVMVSFDLSEEKF 240



 Score = 44.7 bits (104), Expect(2) = 4e-10
 Identities = 39/133 (29%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
 Frame = +3

Query: 3   PFKSVGRGRCVCKLWYNILTHSSFPQAQLAQLSKISP----DIFLFTRAR----PETQFR 158
           P K + R +CV K W ++++H  F +  L +  + +      IFL T       PE    
Sbjct: 21  PVKCLVRFKCVSKTWRSLISHPEFVKNHLKRTKEDTNANHYKIFLSTDPHLSIDPEA--- 77

Query: 159 YIEVNEKSFKKTPMVPYKVFDYDYISESFHLLPRILGCCNGFICLSGINLLNTLLPCNHI 338
           Y + ++         P    +Y YI         ILG CNG +C  G+   N L     I
Sbjct: 78  YFDADDNLLTTQLKFPVSYPEYSYI--------EILGSCNGLVC--GLIHDNPL-----I 122

Query: 339 YVFNPITEEYAEL 377
           Y++NP T E  EL
Sbjct: 123 YIWNPSTRESREL 135


>ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487555|gb|AES68758.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 382

 Score = 46.6 bits (109), Expect(2) = 2e-09
 Identities = 39/117 (33%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
 Frame = +2

Query: 419 KPGKDRDVCLSGFGIADSSMVFKRVLVMFSDCEDNFGKFENRVQV--HTLGSTIWRKKN- 589
           KP    +V   GFG   S   +K V+V+     D    F N+ QV  HTLG+ IWR    
Sbjct: 158 KPTTGLNVMTFGFGYDSSKDNYKVVVVLDYQFLDEDYSFVNKTQVMVHTLGTNIWRTIQE 217

Query: 590 ---GVVPDVLRQVPEKVSVFAHGCLHWMTVDRSLPNGEPIIVSFNLGVEEFGFVPTP 751
              G +P     VP K   F  G ++W+  + SL      IVSF+L  E +  +  P
Sbjct: 218 YPFGGLP-----VPVKKGEFVSGTINWLFSEESL-ECPCFIVSFDLAKESYQKISPP 268



 Score = 41.6 bits (96), Expect(2) = 2e-09
 Identities = 34/125 (27%), Positives = 54/125 (43%)
 Frame = +3

Query: 3   PFKSVGRGRCVCKLWYNILTHSSFPQAQLAQLSKISPDIFLFTRARPETQFRYIEVNEKS 182
           P K + R RCVCK W ++++   F + QL     +S    L  R       +YI  +   
Sbjct: 42  PVKFILRFRCVCKSWNSLISDPKFVKKQLC----VSTTRNLHFRNYAYDSRKYILTSYPL 97

Query: 183 FKKTPMVPYKVFDYDYISESFHLLPRILGCCNGFICLSGINLLNTLLPCNHIYVFNPITE 362
                 +       D+    F+   R +G CNG +CL+  N   +L+ C     +NP T 
Sbjct: 98  DSDFTDITSNFTQSDWPYAKFY---RFIGSCNGIVCLAD-NEYTSLVIC-----WNPSTR 148

Query: 363 EYAEL 377
           ++ EL
Sbjct: 149 KFKEL 153


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 43.5 bits (101), Expect(3) = 7e-09
 Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
 Frame = +2

Query: 452 GFGIADSSMVFKRV-LVMFSDCEDNFGKF------ENRVQVHTLGSTIWRKKNGVVPDVL 610
           GFG    + V+K V +V + +    F +F      ++ VQV TLGS  WR   G V   L
Sbjct: 170 GFGYHPMTEVYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPTWRSL-GKVSYQL 228

Query: 611 RQVPEKVSVFAHGCLHWMTVDRSLPNGEPIIVSFNLGVEEFGFVPTP 751
            + P +  V  +G LHW+T  R        IVSF+L  E+F  +P P
Sbjct: 229 DRWPSEALV--NGRLHWVTRPRRYVT--RFIVSFDLADEQFREIPKP 271



 Score = 37.4 bits (85), Expect(3) = 7e-09
 Identities = 27/125 (21%), Positives = 55/125 (44%)
 Frame = +3

Query: 3   PFKSVGRGRCVCKLWYNILTHSSFPQAQLAQLSKISPDIFLFTRARPETQFRYIEVNEKS 182
           P  S+ + R VC+ W  +   S      L + ++ +P + L        Q  +++++ +S
Sbjct: 43  PVTSLVQFRFVCRGWRLMAQDSLLASKHLCRTAQYNPCLILHCDYPIRNQISFVDISAES 102

Query: 183 FKKTPMVPYKVFDYDYISESFHLLPRILGCCNGFICLSGINLLNTLLPCNHIYVFNPITE 362
             K  +    +  +  + E       ++G CNG +CL+        L  + +YV NP T 
Sbjct: 103 RDKDMVRKLTIPFWASMPEF-----EVVGSCNGLLCLA------DSLFKDAVYVHNPFTR 151

Query: 363 EYAEL 377
           ++ +L
Sbjct: 152 DFKQL 156



 Score = 25.0 bits (53), Expect(3) = 7e-09
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 772 CNRPYSFGVFEGNLSATECTSECDVHIWVMKKYN 873
           CN  Y   V  G LSA    S   + +WVMK+Y+
Sbjct: 279 CN--YHLLVLGGCLSAAVHRSNGKLEVWVMKEYD 310


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 48.9 bits (115), Expect(3) = 7e-08
 Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 12/112 (10%)
 Frame = +2

Query: 452 GFGIADSSMVFK--RVLVMFSDCEDNFGKFENRVQVHTLGSTIWRKKNG--------VVP 601
           GFG    +  +K  R +  + D  D F  F   V+V++L S  W++ +         + P
Sbjct: 147 GFGHDPINEDYKVVRFIHFYGDSPDGF--FHCEVKVYSLKSNSWKRIDDYPYDLRFILPP 204

Query: 602 DVLRQVPEKVSVFAHGCLHWMT--VDRSLPNGEPIIVSFNLGVEEFGFVPTP 751
           D   +      VFA+  +HW    V +   NG  +IV+F+LG EEF  +P P
Sbjct: 205 DYHPRCRRGYGVFANSAVHWKATVVGKGKENGSDLIVAFDLGAEEFKIIPQP 256



 Score = 30.8 bits (68), Expect(3) = 7e-08
 Identities = 28/121 (23%), Positives = 46/121 (38%)
 Frame = +3

Query: 3   PFKSVGRGRCVCKLWYNILTHSSFPQAQLAQLSKISPDIFLFTRARPETQFRYIEVNEKS 182
           P KS+ R RCV K W   +    F    L + S+    + L    R  T    ++++   
Sbjct: 16  PVKSLKRFRCVSKSWCKEIDSPYFINTHLKRSSQAHTHLNLI--LRDATNLCTVDLDSPD 73

Query: 183 FKKTPMVPYKVFDYDYISESFHLLPRILGCCNGFICLSGINLLNTLLPCNHIYVFNPITE 362
           F    +    +   D  +E       ++G CNG + L   +          I ++NP T 
Sbjct: 74  FTSIELKNNPLKSDDCATE-------VMGSCNGLLALLNSDF--------SIALYNPSTR 118

Query: 363 E 365
           E
Sbjct: 119 E 119



 Score = 22.7 bits (47), Expect(3) = 7e-08
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
 Frame = +1

Query: 826 CTSEC-DVHIWVMKKY 870
           C   C  V IWVMK+Y
Sbjct: 278 CNKNCKQVEIWVMKEY 293


>ref|XP_002300154.1| predicted protein [Populus trichocarpa] gi|222847412|gb|EEE84959.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score = 43.9 bits (102), Expect(2) = 3e-07
 Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
 Frame = +3

Query: 3   PFKSVGRGRCVCKLWYNILTHSSFPQAQLAQLSKI----SPDIFLFTRARPETQFRYIEV 170
           P KS+ R +CVCKLW+++++   F ++ L    ++    S  + L TR      F   E 
Sbjct: 17  PVKSLLRFKCVCKLWHSLISDPKFVKSHLKTAREVNSNKSQRLLLSTRTPQSVDF---EA 73

Query: 171 NEKSFKKTPMVPYKVFDYDYISESFHLLPRILGCCNGFICLSGINLLNTLLPCNHIYVFN 350
             +  +   +   +  D    S ++ +   I+G C+G ICL         +    + ++N
Sbjct: 74  ASEGDEDNAVQELEYPDVVRCSPTYFI--GIMGSCDGLICL--------FVDYAKLVLWN 123

Query: 351 PITEEYAEL 377
           P T +Y E+
Sbjct: 124 PSTRDYKEM 132



 Score = 37.4 bits (85), Expect(2) = 3e-07
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
 Frame = +2

Query: 449 SGFGIADSSMVFKRVLVMFSDCEDNFGKFENRVQVHTLGSTIWRKKNGVVPDVLRQ---V 619
           +G G   S+  +K V+     C    G  +  V+V TL + +WRK    VP++ +    V
Sbjct: 145 AGIGYDSSNDDYKFVI---PSCTTADGSEQIMVEVLTLKTNVWRK----VPEICQGTTLV 197

Query: 620 PEKVSVFAHGCLHWMTVDRSLPNGEPIIVSFNLGVEEF-GFVPTP 751
                +F +G +HW+    +    E + VSF++  E F   VP P
Sbjct: 198 GAYRGLFCNGAVHWLGKQENGSEKEYVAVSFDVAEERFKEVVPLP 242