BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015852
         (1259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135706.1| PREDICTED: cytidine deaminase-like [Cucumis ...   402   e-109
ref|XP_002282373.1| PREDICTED: cytidine deaminase-like [Vitis vi...   397   e-108
ref|XP_002514140.1| cytidine deaminase 1, 2, 7, putative [Ricinu...   394   e-107
ref|XP_002308296.1| predicted protein [Populus trichocarpa] gi|2...   374   e-101
ref|NP_179547.1| cytidine deaminase 1 [Arabidopsis thaliana] gi|...   367   4e-99

>ref|XP_004135706.1| PREDICTED: cytidine deaminase-like [Cucumis sativus]
          Length = 304

 Score =  402 bits (1033), Expect = e-109
 Identities = 202/302 (66%), Positives = 236/302 (78%), Gaps = 5/302 (1%)
 Frame = +3

Query: 258  MDRPRFVIEATEVESMAKKSGVSILELLPSLVKSAKKLARPPISKYHVGAVGLGSNGRIF 437
            MD  RFVIEA E ES+AK+S ++I  LLP+LVKSA+ LARPPISKYHVGAVGLGS+GR+F
Sbjct: 1    MDGTRFVIEAPEAESLAKQSALTIPLLLPTLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60

Query: 438  FGVNLEFPGLPLHQSVHAEQFLITNALINRESQINYFAVSSAPCGHCRQFLQEIRGATDI 617
            FGVNLEFPGLPLHQSVHAEQFL+TN  +N ES +NY AVS+APCGHCRQFLQE+R + DI
Sbjct: 61   FGVNLEFPGLPLHQSVHAEQFLVTNLALNAESHLNYLAVSAAPCGHCRQFLQEVRSSADI 120

Query: 618  KILITSSDNGEEEGGEFKP-----ISGFLPHRFGPDDLLEKNVPLLLEPHDNGLVECNNV 782
            KIL+  SD+G + G + KP     +  FLPHRFGP DLL K+VPLLLEP  NGL   N  
Sbjct: 121  KILV--SDSGSDSGSDSKPDVYVPLPQFLPHRFGPYDLLAKDVPLLLEPRFNGLSLPNET 178

Query: 783  YSNGIYCNGNVDIGIGKLKIAAFEAANASHAPYSGCPSGVAIMDSDGKVYKGSYTESAAY 962
              N   CNGN    + KLK AA +AAN SHAPYS CPSGVA+MD +G++Y G Y ESAAY
Sbjct: 179  AENNKLCNGNHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGPYMESAAY 238

Query: 963  NPSLGPIQAALVAYIASGGGGYEKIVAGVLVEKEGAMVGQEGTAMLLLKTISPQCDFRVF 1142
            NPS+GP+QAA+VAYIA GG GYE+IVA VLVEK+G  V QE  A LLL+TISP+C+F V 
Sbjct: 239  NPSMGPVQAAIVAYIAGGGAGYERIVAAVLVEKDGVEVKQERAARLLLETISPECEFTVV 298

Query: 1143 HC 1148
            HC
Sbjct: 299  HC 300


>ref|XP_002282373.1| PREDICTED: cytidine deaminase-like [Vitis vinifera]
          Length = 301

 Score =  397 bits (1021), Expect = e-108
 Identities = 203/301 (67%), Positives = 239/301 (79%), Gaps = 2/301 (0%)
 Frame = +3

Query: 258  MDRPRFVIEATEVESMAKKSGVSILELLPSLVKSAKKLARPPISKYHVGAVGLGSNGRIF 437
            M+R RFVIEA+E ES A+K+G+++++LLPSLV SA+KLARPPISKYHVGAVGLGS+GRIF
Sbjct: 1    MERSRFVIEASEAESKAEKAGLTVMQLLPSLVNSAQKLARPPISKYHVGAVGLGSSGRIF 60

Query: 438  FGVNLEFPGLPLHQSVHAEQFLITNALINRESQINYFAVSSAPCGHCRQFLQEIRGATDI 617
             GVNLEFPGLPL+ SVHAEQFLITN  +  E+ +   AVS+APCGHCRQF QEIR A DI
Sbjct: 61   LGVNLEFPGLPLNHSVHAEQFLITNLSLKAETHLRCLAVSAAPCGHCRQFFQEIRDAPDI 120

Query: 618  KILITSSDNGEEEGGEFKPISGFLPHRFGPDDLLEKNVPLLLEPHDNGLVECNNVYSNGI 797
            K+LITSS +      EF+P+S FLP+RFGPDDLL+K+ PLLLEP +NGL   N + S  +
Sbjct: 121  KVLITSSSD-----QEFRPLSEFLPNRFGPDDLLDKDTPLLLEPQNNGLSLVNAIGSQLV 175

Query: 798  Y--CNGNVDIGIGKLKIAAFEAANASHAPYSGCPSGVAIMDSDGKVYKGSYTESAAYNPS 971
               CNG        LK  A EAAN SHAPYSGCPSGVA++DS+G+VY+GSY ESAAYNPS
Sbjct: 176  NTGCNGVCACDQDSLKYEALEAANKSHAPYSGCPSGVALIDSEGRVYRGSYMESAAYNPS 235

Query: 972  LGPIQAALVAYIASGGGGYEKIVAGVLVEKEGAMVGQEGTAMLLLKTISPQCDFRVFHCE 1151
            LGP+QAALVAYIA GG GYE+IV  VLVEKE A V QE TA LLL  ISP+C+FRVF+C 
Sbjct: 236  LGPVQAALVAYIAGGGDGYEEIVGAVLVEKEEAQVKQEQTARLLLNLISPKCEFRVFYCS 295

Query: 1152 S 1154
            S
Sbjct: 296  S 296


>ref|XP_002514140.1| cytidine deaminase 1, 2, 7, putative [Ricinus communis]
            gi|223546596|gb|EEF48094.1| cytidine deaminase 1, 2, 7,
            putative [Ricinus communis]
          Length = 311

 Score =  394 bits (1011), Expect = e-107
 Identities = 199/308 (64%), Positives = 247/308 (80%), Gaps = 9/308 (2%)
 Frame = +3

Query: 258  MDRPRFVIEATEVESMAKKSGVSILELLPSLVKSAKKLARPPISKYHVGAVGLGSNGRIF 437
            M+ PRFVIEA+E ESMA+K+G++++ELLP+LVKSA+ LARPPIS Y+VGAVGLGS+GRIF
Sbjct: 1    MEPPRFVIEASEAESMAQKAGLTLVELLPTLVKSAQSLARPPISDYYVGAVGLGSSGRIF 60

Query: 438  FGVNLEFPGLPLHQSVHAEQFLITNALINRESQINYFAVSSAPCGHCRQFLQEIRGATDI 617
            FG NLEFPGLPLHQSVHAEQFLITN  +N ES + Y AVS+APCGHCRQF QEIR A DI
Sbjct: 61   FGANLEFPGLPLHQSVHAEQFLITNLFLNAESNLKYVAVSAAPCGHCRQFFQEIRDAPDI 120

Query: 618  KILIT----SSDNGEEEGGE---FKPISGFLPHRFGPDDLLEKNVPLLLEPHDNGL-VEC 773
            +ILIT    +++N ++  G+   F  +S  LP RFGP DLL+K+VPL+LE H+N + ++ 
Sbjct: 121  QILITGDSNNTNNNDQSNGDIKRFDTLSNLLPQRFGPYDLLDKSVPLVLEKHNNHMSLQN 180

Query: 774  NNVYSNGIYCNGNVDIGI-GKLKIAAFEAANASHAPYSGCPSGVAIMDSDGKVYKGSYTE 950
            +++ +N       + I +   LK+ A EAAN+SHAPYS CPSGVA+MD +GKVYKGSY E
Sbjct: 181  DDISNNSKKVPNGISISVFDDLKLEALEAANSSHAPYSKCPSGVALMDCEGKVYKGSYME 240

Query: 951  SAAYNPSLGPIQAALVAYIASGGGGYEKIVAGVLVEKEGAMVGQEGTAMLLLKTISPQCD 1130
            SAAYNPSLGP+QAA+VAY+  GGGGYEKIVA VLVEKE A+V QE TA LLL+ ISP+C+
Sbjct: 241  SAAYNPSLGPVQAAIVAYLVGGGGGYEKIVAAVLVEKEEAVVRQEFTARLLLQVISPRCE 300

Query: 1131 FRVFHCES 1154
            F+VFHC S
Sbjct: 301  FKVFHCSS 308


>ref|XP_002308296.1| predicted protein [Populus trichocarpa] gi|222854272|gb|EEE91819.1|
            predicted protein [Populus trichocarpa]
          Length = 315

 Score =  374 bits (961), Expect = e-101
 Identities = 194/307 (63%), Positives = 233/307 (75%), Gaps = 8/307 (2%)
 Frame = +3

Query: 258  MDRPRFVIEATEVESMAKKSGVSILELLPSLVKSAKKLARPPISKYHVGAVGLGSNGRIF 437
            MD P FVIEA+E ESMAK+SG+++L+LLP+LVKSA+ LARPPIS YHVGAVGLGS+GRIF
Sbjct: 1    MDGPIFVIEASEAESMAKQSGLTVLQLLPALVKSAQALARPPISDYHVGAVGLGSSGRIF 60

Query: 438  FGVNLEFPGLPLHQSVHAEQFLITNALINRESQINYFAVSSAPCGHCRQFLQEIRGATDI 617
             G NLEFPGLPLH SVHAEQFLITN  +N E  + Y AVS+APCGHCRQFLQEIR A D+
Sbjct: 61   LGGNLEFPGLPLHHSVHAEQFLITNLTLNAEPSLKYIAVSAAPCGHCRQFLQEIRHAPDV 120

Query: 618  KILIT-------SSDNGEEEGGEFKPISGFLPHRFGPDDLLEKNVPLLLEPHDNGLVECN 776
            +ILIT       S  N      +F+P+S  LPHRFGPDDLL+K++PLLLE   N L    
Sbjct: 121  QILITGDSTNNQSYKNDLANKQQFEPLSCLLPHRFGPDDLLDKDIPLLLETRHNNL---- 176

Query: 777  NVYSNGIYCNGNVDIGIGKLKIAAFEAANASHAPYSGCPSGVAIMDSDGKVYKGSYTESA 956
            +   + +  NG +      L+  A EAAN SHAP++ CPSGVA+MD +GKVY+GSY ESA
Sbjct: 177  SFVGDALLPNG-ICASFDDLENEALEAANKSHAPFTNCPSGVALMDCEGKVYRGSYMESA 235

Query: 957  AYNPSLGPIQAALVAYIASG-GGGYEKIVAGVLVEKEGAMVGQEGTAMLLLKTISPQCDF 1133
            AYNPS+GP+QAALVAY+  G GGGY++IVA VLVEK+GA   QE TA LLLK ISP+C+ 
Sbjct: 236  AYNPSIGPVQAALVAYVMGGRGGGYDRIVAAVLVEKQGAKARQEQTARLLLKEISPKCEL 295

Query: 1134 RVFHCES 1154
            +VFHC S
Sbjct: 296  KVFHCGS 302


>ref|NP_179547.1| cytidine deaminase 1 [Arabidopsis thaliana]
            gi|6090835|gb|AAF03358.1|AF134487_1 cytidine deaminase 1
            [Arabidopsis thaliana] gi|3046700|emb|CAA06460.1|
            cytidine deaminase [Arabidopsis thaliana]
            gi|3093276|emb|CAA06671.1| cytidine deaminase
            [Arabidopsis thaliana] gi|4191787|gb|AAD10156.1| putative
            cytidine deaminase [Arabidopsis thaliana]
            gi|22135974|gb|AAM91569.1| putative cytidine deaminase
            [Arabidopsis thaliana] gi|30984516|gb|AAP42721.1|
            At2g19570 [Arabidopsis thaliana]
            gi|330251802|gb|AEC06896.1| cytidine deaminase 1
            [Arabidopsis thaliana]
          Length = 301

 Score =  367 bits (941), Expect = 4e-99
 Identities = 188/303 (62%), Positives = 228/303 (75%), Gaps = 6/303 (1%)
 Frame = +3

Query: 258  MDRPRFVIEATEVESMAKKSGVSILELLPSLVKSAKKLARPPISKYHVGAVGLGSNGRIF 437
            MD+P FVI++ E ES AK+ GVS+++LLPSLVK A+  AR PISK++V  VGLGS+GRIF
Sbjct: 1    MDKPSFVIQSKEAESAAKQLGVSVIQLLPSLVKPAQSYARTPISKFNVAVVGLGSSGRIF 60

Query: 438  FGVNLEFPGLPLHQSVHAEQFLITNALINRESQINYFAVSSAPCGHCRQFLQEIRGATDI 617
             GVN+EFP LPLH S+HAEQFL+TN  +N E  +N+FAVS+APCGHCRQFLQEIR A +I
Sbjct: 61   LGVNVEFPNLPLHHSIHAEQFLVTNLTLNGERHLNFFAVSAAPCGHCRQFLQEIRDAPEI 120

Query: 618  KILITSSDNGEE-----EGGEFKPISGFLPHRFGPDDLLEKNVPLLLEPHDNGLVECNNV 782
            KILIT  +N  +     +   F  +  FLPHRFGPDDLL K+ PLLLE HDN L     +
Sbjct: 121  KILITDPNNSADSDSAADSDGFLRLGSFLPHRFGPDDLLGKDHPLLLESHDNHL----KI 176

Query: 783  YSNGIYCNGNVDIGIGKLKIAAFEAANASHAPYSGCPSGVAIMDSDGKVYKGSYTESAAY 962
                  CNGN D     LK  A  AAN S+APYS CPSGV+++D DGKVY+G Y ESAAY
Sbjct: 177  SDLDSICNGNTD-SSADLKQTALAAANRSYAPYSLCPSGVSLVDCDGKVYRGWYMESAAY 235

Query: 963  NPSLGPIQAALVAYIAS-GGGGYEKIVAGVLVEKEGAMVGQEGTAMLLLKTISPQCDFRV 1139
            NPS+GP+QAALV Y+A+ GGGGYE+IV  VLVEKE A+V QE TA LLL+TISP+C+F+V
Sbjct: 236  NPSMGPVQAALVDYVANGGGGGYERIVGAVLVEKEDAVVRQEHTARLLLETISPKCEFKV 295

Query: 1140 FHC 1148
            FHC
Sbjct: 296  FHC 298