BLASTX nr result

ID: Coptis25_contig00015845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015845
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590837.1| COP1-interacting protein [Medicago truncatul...   124   6e-27
ref|XP_002311679.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
ref|XP_002528832.1| conserved hypothetical protein [Ricinus comm...   122   2e-26
emb|CBI23663.3| unnamed protein product [Vitis vinifera]              119   2e-25
ref|XP_002281562.2| PREDICTED: uncharacterized protein LOC100251...   118   4e-25

>ref|XP_003590837.1| COP1-interacting protein [Medicago truncatula]
           gi|355479885|gb|AES61088.1| COP1-interacting protein
           [Medicago truncatula]
          Length = 1358

 Score =  124 bits (312), Expect = 6e-27
 Identities = 54/110 (49%), Positives = 76/110 (69%), Gaps = 1/110 (0%)
 Frame = -3

Query: 327 WPIH-PHGAPPIFQPYPMHAMPYYQNYPGNGPFFQPPYPPMDDPRFNPTQRVGQRRQSME 151
           WP+H P G  P++ PYP+  +PYYQ YPGN P+ QP YPPMDDPR  P Q +G RR SM+
Sbjct: 358 WPVHSPPGTVPVYPPYPVQGIPYYQPYPGNSPYMQPNYPPMDDPRLTPGQNMGLRRHSMD 417

Query: 150 SKDSNTESESGELGVPRMRPQDVSELENEGSQGREPRRKGGRASKKQAGM 1
           S+ SNT SE+ ++   + R  D  ++E EGSQ  + R+KG R+ ++++GM
Sbjct: 418 SRHSNTGSETCDVEASKSRLHDEVDMEREGSQTGDRRKKGSRSGRQKSGM 467


>ref|XP_002311679.1| predicted protein [Populus trichocarpa] gi|222851499|gb|EEE89046.1|
           predicted protein [Populus trichocarpa]
          Length = 1218

 Score =  124 bits (312), Expect = 6e-27
 Identities = 64/109 (58%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
 Frame = -3

Query: 327 WPIH-PHGAPPIFQPYPMHAMPYYQNYPGNGPFFQPPYPPMDDPRFNPTQRVGQRRQSME 151
           WPIH P GA P+F  YPM  +PYYQNYPGN P FQPPY   DDPR N  QR+  RR SM 
Sbjct: 338 WPIHSPPGAVPVFPGYPMQGIPYYQNYPGNSPVFQPPYSSGDDPRINAGQRMSHRRHSM- 396

Query: 150 SKDSNTESESGELGVPRMRPQDVSELENEGSQGREPRRKGGRASKKQAG 4
             DSNTE E+ E+   R R QD +E E E S GREP RKG R+ K+Q+G
Sbjct: 397 --DSNTEPEAWEVDALRTRSQDETE-EKETSGGREPGRKGSRSGKRQSG 442


>ref|XP_002528832.1| conserved hypothetical protein [Ricinus communis]
           gi|223531744|gb|EEF33566.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1280

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/110 (53%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
 Frame = -3

Query: 327 WPIH-PHGAPPIFQPYPMHAMPYYQNYPGNGPFFQPPYPPMDDPRFNPTQRVGQRRQSME 151
           WP+H P GA P+FQ YPM  +PYYQNYPGNGP++QPPYP  +D R N  QR G RR SM+
Sbjct: 312 WPMHSPPGALPVFQGYPMQGIPYYQNYPGNGPYYQPPYPSGEDMRLNAGQRKGHRRHSMD 371

Query: 150 SKDSNTESESGELGVPRMRPQDVSELENEGSQGREPRRKGGRASKKQAGM 1
           + D NT+ E+G++ V         ELE E S  RE  +K  R+SKKQ+GM
Sbjct: 372 NGDGNTDLETGDVDV---------ELEKETSGNRESEKKSSRSSKKQSGM 412


>emb|CBI23663.3| unnamed protein product [Vitis vinifera]
          Length = 1216

 Score =  119 bits (299), Expect = 2e-25
 Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
 Frame = -3

Query: 327 WPIH-PHGAPPIFQPYPMHAMPYYQNYPGNGPFFQPPYPPMDDPRFNPTQRVGQRRQSME 151
           WPIH P GA P+FQPYPM  MPYYQNYPGNG F QPPYPPM+D RF+P  R+GQ+R SM+
Sbjct: 330 WPIHSPPGAVPVFQPYPMQGMPYYQNYPGNGSFVQPPYPPMEDSRFSPGYRMGQKRHSMD 389

Query: 150 SKDSNTESESGELGVPRMR 94
           S+DSNTESE+ +    + R
Sbjct: 390 SRDSNTESETWDADASKTR 408


>ref|XP_002281562.2| PREDICTED: uncharacterized protein LOC100251059 [Vitis vinifera]
          Length = 1292

 Score =  118 bits (296), Expect = 4e-25
 Identities = 51/70 (72%), Positives = 59/70 (84%), Gaps = 1/70 (1%)
 Frame = -3

Query: 327 WPIH-PHGAPPIFQPYPMHAMPYYQNYPGNGPFFQPPYPPMDDPRFNPTQRVGQRRQSME 151
           WPIH P GA P+FQPYPM  MPYYQNYPGNG F QPPYPPM+D RF+P  R+GQ+R SM+
Sbjct: 313 WPIHSPPGAVPVFQPYPMQGMPYYQNYPGNGSFVQPPYPPMEDSRFSPGYRMGQKRHSMD 372

Query: 150 SKDSNTESES 121
           S+DSNTESE+
Sbjct: 373 SRDSNTESET 382


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