BLASTX nr result

ID: Coptis25_contig00015829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015829
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271328.1| PREDICTED: oligoribonuclease [Vitis vinifera...   249   4e-64
ref|XP_002330965.1| predicted protein [Populus trichocarpa] gi|2...   244   9e-63
ref|XP_004142177.1| PREDICTED: oligoribonuclease-like [Cucumis s...   233   3e-59
ref|XP_003574951.1| PREDICTED: oligoribonuclease-like [Brachypod...   229   2e-58
ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|3...   229   4e-58

>ref|XP_002271328.1| PREDICTED: oligoribonuclease [Vitis vinifera]
           gi|296083947|emb|CBI24335.3| unnamed protein product
           [Vitis vinifera]
          Length = 245

 Score =  249 bits (635), Expect = 4e-64
 Identities = 119/145 (82%), Positives = 133/145 (91%), Gaps = 1/145 (0%)
 Frame = +3

Query: 3   GPDLVIHQSKECLDNMGEWCQSHHEASGLTKRVLDSTISESNAEKQVFSFVKKHIGTRTP 182
           GPDLVIHQ+KECLDNMGEWCQSHH ASGLTK+VL STISE  AEKQV  FVK+++GT TP
Sbjct: 101 GPDLVIHQTKECLDNMGEWCQSHHSASGLTKKVLRSTISEQEAEKQVIEFVKRNVGTYTP 160

Query: 183 LLAGNSVYVDFLYLKKYMPDLAGLFSHVLVDVSTIKALCMRWYPKENKKAPSKEKNHRAM 362
           LLAGNSVY+DFL+LKKYMPDLA LFSHVLVDVS+IKALC+RWYP+++KKAPSKE  HRAM
Sbjct: 161 LLAGNSVYMDFLFLKKYMPDLASLFSHVLVDVSSIKALCIRWYPRDSKKAPSKENKHRAM 220

Query: 363 DDIKESIAELKYYKENIFKA-KSKK 434
           DDI+ESI ELKYY+ENIFKA KSKK
Sbjct: 221 DDIRESIRELKYYRENIFKASKSKK 245


>ref|XP_002330965.1| predicted protein [Populus trichocarpa] gi|222872757|gb|EEF09888.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score =  244 bits (623), Expect = 9e-63
 Identities = 112/144 (77%), Positives = 128/144 (88%)
 Frame = +3

Query: 3   GPDLVIHQSKECLDNMGEWCQSHHEASGLTKRVLDSTISESNAEKQVFSFVKKHIGTRTP 182
           GPDLVIHQSKECLD MGEWCQSHH ASGLT +VL S I+E +AEKQV  FVK+H+GT TP
Sbjct: 76  GPDLVIHQSKECLDRMGEWCQSHHAASGLTNKVLGSKITERDAEKQVIEFVKRHVGTHTP 135

Query: 183 LLAGNSVYVDFLYLKKYMPDLAGLFSHVLVDVSTIKALCMRWYPKENKKAPSKEKNHRAM 362
           L+AGNSVYVDFL+LKKYMPDLAGLFSHV+VDVS++ ALCMRWYP++ +KAP KE  HRA+
Sbjct: 136 LIAGNSVYVDFLFLKKYMPDLAGLFSHVVVDVSSVMALCMRWYPQDRRKAPQKENKHRAL 195

Query: 363 DDIKESIAELKYYKENIFKAKSKK 434
           DDI+ESI ELKYYKEN+FK KSKK
Sbjct: 196 DDIRESIRELKYYKENMFKPKSKK 219


>ref|XP_004142177.1| PREDICTED: oligoribonuclease-like [Cucumis sativus]
           gi|449503429|ref|XP_004161998.1| PREDICTED:
           oligoribonuclease-like [Cucumis sativus]
          Length = 253

 Score =  233 bits (593), Expect = 3e-59
 Identities = 112/143 (78%), Positives = 121/143 (84%)
 Frame = +3

Query: 3   GPDLVIHQSKECLDNMGEWCQSHHEASGLTKRVLDSTISESNAEKQVFSFVKKHIGTRTP 182
           GPDLVIHQSKECLD MGEWCQSHH ASGLTK+VL STISE  AEKQV  FVKKH+ T   
Sbjct: 111 GPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKL 170

Query: 183 LLAGNSVYVDFLYLKKYMPDLAGLFSHVLVDVSTIKALCMRWYPKENKKAPSKEKNHRAM 362
            LAGNSVY+DF++LKKYMPDLAGLFSHVLVDVS+IK LC RWYP++ KKAP KE  HRAM
Sbjct: 171 HLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAM 230

Query: 363 DDIKESIAELKYYKENIFKAKSK 431
           DDI+ESI ELKYYKENIFK   K
Sbjct: 231 DDIRESIMELKYYKENIFKNSKK 253


>ref|XP_003574951.1| PREDICTED: oligoribonuclease-like [Brachypodium distachyon]
          Length = 247

 Score =  229 bits (585), Expect = 2e-58
 Identities = 108/145 (74%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
 Frame = +3

Query: 3   GPDLVIHQSKECLDNMGEWCQSHHEASGLTKRVLDSTISESNAEKQVFSFVKKHIGTRTP 182
           GPDLVI+QSK+CLDNMGEWC++HH +SGLT+RVL S ISE +AEKQV  F+ +H+G+ TP
Sbjct: 103 GPDLVINQSKDCLDNMGEWCKTHHASSGLTERVLQSEISEHDAEKQVLDFLMRHVGSGTP 162

Query: 183 LLAGNSVYVDFLYLKKYMPDLAGLFSHVLVDVSTIKALCMRWYPKENKKAPSKEKNHRAM 362
           L+AGNSVYVD L+LKKYMP LA +FSHV+VDVS+I ALC+RWYPKE K+ P KEK HRAM
Sbjct: 163 LIAGNSVYVDLLFLKKYMPQLAAIFSHVIVDVSSIMALCIRWYPKERKQTPRKEKTHRAM 222

Query: 363 DDIKESIAELKYYKENIFK-AKSKK 434
           DDIKESIAELKYYK+NIFK  KSKK
Sbjct: 223 DDIKESIAELKYYKDNIFKPQKSKK 247


>ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|355518478|gb|AET00102.1|
            Oligoribonuclease [Medicago truncatula]
          Length = 1551

 Score =  229 bits (583), Expect = 4e-58
 Identities = 106/144 (73%), Positives = 125/144 (86%), Gaps = 1/144 (0%)
 Frame = +3

Query: 3    GPDLVIHQSKECLDNMGEWCQSHHEASGLTKRVLDSTISESNAEKQVFSFVKKHIG-TRT 179
            GPDLVIHQ+KECLD MGEWC+SHH ASGLTK+VL STISE  AE+QV  FVKKH+G T  
Sbjct: 753  GPDLVIHQTKECLDGMGEWCKSHHAASGLTKKVLQSTISEREAEEQVIEFVKKHVGGTYK 812

Query: 180  PLLAGNSVYVDFLYLKKYMPDLAGLFSHVLVDVSTIKALCMRWYPKENKKAPSKEKNHRA 359
            PLLAGNS+YVD  Y+KKYMP+LAG+FSHV+VDVS+I ALC+RWYPK+ KK P+K+K HRA
Sbjct: 813  PLLAGNSIYVDLQYMKKYMPELAGIFSHVVVDVSSISALCIRWYPKDQKKVPTKQKRHRA 872

Query: 360  MDDIKESIAELKYYKENIFKAKSK 431
            +DDI+ESI ELKYYK NIFK K++
Sbjct: 873  LDDIRESIEELKYYKANIFKPKAE 896


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