BLASTX nr result
ID: Coptis25_contig00015812
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00015812
(1576 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI18893.3| unnamed protein product [Vitis vinifera] 387 e-105
ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synth... 383 e-104
ref|XP_002510624.1| conserved hypothetical protein [Ricinus comm... 353 5e-95
ref|XP_002307763.1| predicted protein [Populus trichocarpa] gi|2... 330 8e-88
ref|XP_003544381.1| PREDICTED: putative tRNA pseudouridine synth... 326 1e-86
>emb|CBI18893.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 387 bits (995), Expect = e-105
Identities = 216/421 (51%), Positives = 271/421 (64%), Gaps = 16/421 (3%)
Frame = -1
Query: 1216 DEEAQIIEHAVRSLPSHAAAIDLLSSGVCVRCILRLFGVSGRVXXXXXXXXXXXXXXXXX 1037
+++ +I+ AV + HA DLLS G+C+ CI RL GV G +
Sbjct: 64 EDDMRILNDAVSKVSPHAVK-DLLSLGICIGCIFRLSGVRGHIFSCPSLLLSILHPVIDS 122
Query: 1036 XXXSHDYSDTWRPSIEAESLYYCSVCLGILQFCHTDGKV----KDQVSEFTLSIAEMVKK 869
P I CS+CLG+LQF + D K KD E +SIA +VKK
Sbjct: 123 GAAHSSQESECEPVI-------CSICLGVLQFTYFDDKKMLVKKDSADELAVSIANLVKK 175
Query: 868 EGHEIENFCFEISVPPIISANENAIWLCMKNKYGSELWCQEEKLLAEHVSLKDALKMSVT 689
EGHE +NF E+S+PP+I+ NE+ + L MK KYGSELW QE K L+E +S KDALK+S+
Sbjct: 176 EGHEFDNFSLEVSIPPVIAENEHVVLLYMKKKYGSELWFQE-KFLSERISAKDALKLSLC 234
Query: 688 DSLEALLAGKYALGS-FHICLTYTQTKASSWLLGCQDRNQDFKRRKTETVDS-------- 536
+ LE LL K + S F I LTY Q +AS +R+Q KRR+T T +
Sbjct: 235 NPLEKLLDVKSSGSSTFRIRLTYAQPRASGKNQNITERSQGCKRRRTGTENIFSTVHGSV 294
Query: 535 VQGLECSEDASGEVGSAMDTSLNGLQDSES---FNSAPEKVKEPCCLTCHCYRTPIYVGG 365
V G+ECS+ ++ E + + +GLQD+E+ F EKV +PC L CYRT IY+GG
Sbjct: 295 VDGIECSDISTSEADAGIRKPSDGLQDNENSDCFKFPLEKVNQPCHLAFLCYRTHIYIGG 354
Query: 364 RYLKYSRNVSQTRWIIDDERMGEASVEEIIGNTIIPICRGDKYKFHAAGREDIDVRMLGS 185
RYLKYSRNVSQTRWIIDDERMGEASVEEIIG I+P+C GD YKFHAAGREDI+VRMLGS
Sbjct: 355 RYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILPMCLGDNYKFHAAGREDINVRMLGS 414
Query: 184 GRPFLVEVQNARHDPSKVEMTDIEEKINNSEIKLVRVKNLKVVGNQGWTLMREGEAEKQK 5
GRPFLVE+QN+RH PS+ + +IE KINN E KLVRVKNLK+V + GW+LM+EGE EKQK
Sbjct: 415 GRPFLVEIQNSRHVPSEALIKEIEVKINNLENKLVRVKNLKLVDSHGWSLMQEGEEEKQK 474
Query: 4 Q 2
Q
Sbjct: 475 Q 475
>ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Vitis
vinifera]
Length = 578
Score = 383 bits (984), Expect = e-104
Identities = 221/432 (51%), Positives = 277/432 (64%), Gaps = 27/432 (6%)
Frame = -1
Query: 1216 DEEAQIIEHAVRSLPSHAAAIDLLSSGVCVRCILRLFGVSGRVXXXXXXXXXXXXXXXXX 1037
+++ +I+ AV + HA DLLS G+C+ CI RL GV G +
Sbjct: 33 EDDMRILNDAVSKVSPHAVK-DLLSLGICIGCIFRLSGVRGHIFSCPSLLLSILHPVIGE 91
Query: 1036 XXXS--HDY--------SDTWRPSIEAE-SLYYCSVCLGILQFCHTDGKV----KDQVSE 902
S H Y S S E+E CS+CLG+LQF + D K KD E
Sbjct: 92 PTDSSTHRYTGIGGNEDSGAAHSSQESECEPVICSICLGVLQFTYFDDKKMLVKKDSADE 151
Query: 901 FTLSIAEMVKKEGHEIENFCFEISVPPIISANENAIWLCMKNKYGSELWCQEEKLLAEHV 722
+SIA +VKKEGHE +NF E+S+PP+I+ NE+ + L MK KYGSELW QE K L+E +
Sbjct: 152 LAVSIANLVKKEGHEFDNFSLEVSIPPVIAENEHVVLLYMKKKYGSELWFQE-KFLSERI 210
Query: 721 SLKDALKMSVTDSLEALLAGKYALGS-FHICLTYTQTKASSWLLGCQDRNQDFKRRKTET 545
S KDALK+S+ + LE LL K + S F I LTY Q +AS +R+Q KRR+T T
Sbjct: 211 SAKDALKLSLCNPLEKLLDVKSSGSSTFRIRLTYAQPRASGKNQNITERSQGCKRRRTGT 270
Query: 544 VDS--------VQGLECSEDASGEVGSAMDTSLNGLQDSES---FNSAPEKVKEPCCLTC 398
+ V G+ECS+ ++ E + + +GLQD+E+ F EKV +PC L
Sbjct: 271 ENIFSTVHGSVVDGIECSDISTSEADAGIRKPSDGLQDNENSDCFKFPLEKVNQPCHLAF 330
Query: 397 HCYRTPIYVGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGNTIIPICRGDKYKFHAAG 218
CYRT IY+GGRYLKYSRNVSQTRWIIDDERMGEASVEEIIG I+P+C GD YKFHAAG
Sbjct: 331 LCYRTHIYIGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILPMCLGDNYKFHAAG 390
Query: 217 REDIDVRMLGSGRPFLVEVQNARHDPSKVEMTDIEEKINNSEIKLVRVKNLKVVGNQGWT 38
REDI+VRMLGSGRPFLVE+QN+RH PS+ + +IE KINN E KLVRVKNLK+V + GW+
Sbjct: 391 REDINVRMLGSGRPFLVEIQNSRHVPSEALIKEIEVKINNLENKLVRVKNLKLVDSHGWS 450
Query: 37 LMREGEAEKQKQ 2
LM+EGE EKQKQ
Sbjct: 451 LMQEGEEEKQKQ 462
>ref|XP_002510624.1| conserved hypothetical protein [Ricinus communis]
gi|223551325|gb|EEF52811.1| conserved hypothetical
protein [Ricinus communis]
Length = 565
Score = 353 bits (907), Expect = 5e-95
Identities = 206/423 (48%), Positives = 257/423 (60%), Gaps = 18/423 (4%)
Frame = -1
Query: 1216 DEEAQIIEHAVRSLPSHAAAIDLLSSGVCVRCILRLFGVSGRVXXXXXXXXXXXXXXXXX 1037
DE+ ++ AVRSLPSHA LL +G+C+RCI RL GV G +
Sbjct: 32 DEDMRLFNEAVRSLPSHAVK-GLLRNGICMRCIFRLLGVQGHI--FFTYPLSRSLMHNIL 88
Query: 1036 XXXSHDYSDTWRPSIEAES---LYYCSVCLGILQFCHTDGK----VKDQVSEFTLSIAEM 878
D D S ES C+VCLGILQF H D K K +SIAE+
Sbjct: 89 GESWKDDEDMKGCSTYNESGVDQEICNVCLGILQFIHRDDKGVLVKKHNAVNLCVSIAEL 148
Query: 877 VKKEGHEIENFCFEISVPPIISANENAIWLCMKNKYGSELWCQEEKLLAEHVSLKDALKM 698
+K+EGH+I++F E+S+ PII NE I L M+ KY SELW QE +++ + K+ALK
Sbjct: 149 IKQEGHQIDSFSLEVSIAPIIQENERVIRLYMERKYRSELWFQES--VSKCICTKEALKF 206
Query: 697 SVTDSLEALLAGKYALGSFHICLTYTQTKASSWLLGCQDRNQDFKRRKTETVDSVQGLE- 521
++ + LE +L K S I LTYTQ K S + KRRKT D+ + +
Sbjct: 207 AIANPLERMLDVKSGPSSCRIRLTYTQAKPSGIAPNSVPGGEGCKRRKTGITDAPESVNN 266
Query: 520 --------CSEDASGEVGSAMDTSLNGLQDSESFNS--APEKVKEPCCLTCHCYRTPIYV 371
C + + + + ++S GL++ ES EKVKEPC L CYRTPIY
Sbjct: 267 ELINARNGCFDSSMYKGIDSSESSFCGLENHESSECIFPKEKVKEPCNLLFLCYRTPIYF 326
Query: 370 GGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGNTIIPICRGDKYKFHAAGREDIDVRML 191
GGRYLK+SRNVSQTRWIIDDERMGEAS+EEIIG +I P+C+GD YKFHAAGREDIDVRML
Sbjct: 327 GGRYLKFSRNVSQTRWIIDDERMGEASIEEIIGGSIFPMCQGDSYKFHAAGREDIDVRML 386
Query: 190 GSGRPFLVEVQNARHDPSKVEMTDIEEKINNSEIKLVRVKNLKVVGNQGWTLMREGEAEK 11
GSGRPFLVE+QN R PS+ + +IE KINN KLV V++LK+V N WTLM EGEAEK
Sbjct: 387 GSGRPFLVEIQNPRQLPSETLVEEIETKINNMHDKLVGVRHLKMVSNHSWTLMHEGEAEK 446
Query: 10 QKQ 2
QKQ
Sbjct: 447 QKQ 449
>ref|XP_002307763.1| predicted protein [Populus trichocarpa] gi|222857212|gb|EEE94759.1|
predicted protein [Populus trichocarpa]
Length = 520
Score = 330 bits (845), Expect = 8e-88
Identities = 201/414 (48%), Positives = 245/414 (59%), Gaps = 9/414 (2%)
Frame = -1
Query: 1216 DEEAQIIEHAVRSLPSHAAAIDLLSSGVCVRCILRLFGVSGRVXXXXXXXXXXXXXXXXX 1037
D+E + + AVRSLPSHA DLLS+G
Sbjct: 32 DDERRHLNDAVRSLPSHAVK-DLLSAG--------------------------------- 57
Query: 1036 XXXSHDYSDTWRPSIEAESLYYCSVCLGILQFCHTDGKV----KDQVSEFTLSIAEMVKK 869
S++ ++ E C +CLGILQF + D K + E SIAE+ ++
Sbjct: 58 --GDSSSSESMESELKPE---VCRICLGILQFIYRDEKEMLVKRKNGDELAASIAELTRQ 112
Query: 868 EGHEIENFCFEISVPPIISANENAIWLCMKNKYGSELWCQEEKLLAEHVSLKDALKMSVT 689
EGH+I+ F E+S+PPII NE A+ L MK KYGSELW QE L+E +S KDALK ++
Sbjct: 113 EGHQIDGFSLEVSIPPIIFENEQAVRLYMKKKYGSELWFQER--LSECISTKDALKFAIV 170
Query: 688 DSLEALLAGKYALGSFHICLTYTQTKASSWLLGCQDRNQDFKRR-KTETVDSV-QGLECS 515
+ LE +L K I LTYT+TK S DRN T V+ V G C
Sbjct: 171 NPLEIILDVKSGPSYVRIRLTYTETKPSIIPSKSVDRNGGTNNGLDTVHVELVGNGTGCC 230
Query: 514 EDASGEVGSAMDTSLNGL---QDSESFNSAPEKVKEPCCLTCHCYRTPIYVGGRYLKYSR 344
+ + G+ A S GL + SE N E+V EPC L CYRTPIY GGRYLK+SR
Sbjct: 231 DLSLGQGSPASGRSSTGLAEHESSECSNFPLERVNEPCHLVFLCYRTPIYFGGRYLKFSR 290
Query: 343 NVSQTRWIIDDERMGEASVEEIIGNTIIPICRGDKYKFHAAGREDIDVRMLGSGRPFLVE 164
NVSQTRWIIDDERMGEAS+EEIIG I+P+C+GD YKFHAAGREDIDVRMLGSGRPFLVE
Sbjct: 291 NVSQTRWIIDDERMGEASIEEIIGGNILPMCQGDSYKFHAAGREDIDVRMLGSGRPFLVE 350
Query: 163 VQNARHDPSKVEMTDIEEKINNSEIKLVRVKNLKVVGNQGWTLMREGEAEKQKQ 2
VQNAR PS+ + +IE ++NN KLV VKNL +V + W LMREGEAEKQKQ
Sbjct: 351 VQNAREVPSEALVKEIETRMNNLGNKLVGVKNLSLVTSHSWDLMREGEAEKQKQ 404
>ref|XP_003544381.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Glycine
max]
Length = 484
Score = 326 bits (835), Expect = 1e-86
Identities = 197/412 (47%), Positives = 245/412 (59%), Gaps = 7/412 (1%)
Frame = -1
Query: 1216 DEEAQI----IEHAVRSLPSHAAAIDLLSSGVCVRCILRLFGVSGRVXXXXXXXXXXXXX 1049
++EA++ E VR+LPS A +LLS GVC RCI RLFG+ G V
Sbjct: 2 EKEAELGEKEFEQMVRALPSDAVK-ELLSHGVCTRCIFRLFGLQGPVYASPPSLSSL--- 57
Query: 1048 XXXXXXXSHDYSDTWRPSIEAESLYYCSVCLGILQFCHTDGKVKDQVSEFTLSIAEMVKK 869
+ T + + C++CLGILQF +++ Q L IA+MVK+
Sbjct: 58 ----------FDATQQDCL-------CTLCLGILQFTYSNV----QNDNLPLLIADMVKR 96
Query: 868 EGHEIENFCFEISVPPIISANENAIWLCMKNKYGSELWCQEEKLLAEHVSLKDALKMSVT 689
+ ++ + F E+S+PPII + N + MK KYGS+ W QE L + +S KDALK S+
Sbjct: 97 QAYQFDTFSLEVSIPPIIIDDVNFLCSYMKTKYGSQPWFQEN-LHSGCISTKDALKFSLI 155
Query: 688 DSLEALLAGKYALGSFHICLTYTQTKASSWLLGCQDRNQDFKRRKTETVDSVQGLECSED 509
L+ LL K +G F I LTYT TK + C + KRRK
Sbjct: 156 YPLQNLLECKSNMGPFRIRLTYTHTKGNDKSSDCAA--ETCKRRKI-------------- 199
Query: 508 ASGEVGSAMDTSLNGLQDSESFNSAP---EKVKEPCCLTCHCYRTPIYVGGRYLKYSRNV 338
GE + S + +++S + EK EPC T CYRTP Y GGRYLKYSRNV
Sbjct: 200 --GEPSIVGERSFSSTLENDSSDCCKFLLEKANEPCHFTYSCYRTPFYFGGRYLKYSRNV 257
Query: 337 SQTRWIIDDERMGEASVEEIIGNTIIPICRGDKYKFHAAGREDIDVRMLGSGRPFLVEVQ 158
SQTRWIIDDERMGEASVEEIIG I+ C+GD +KFHAAGREDIDVRMLG GRPFLVEVQ
Sbjct: 258 SQTRWIIDDERMGEASVEEIIGGNILQACQGDSFKFHAAGREDIDVRMLGPGRPFLVEVQ 317
Query: 157 NARHDPSKVEMTDIEEKINNSEIKLVRVKNLKVVGNQGWTLMREGEAEKQKQ 2
N RH PS++ + DIE+ IN E KLVRVKNLK+VG+ GW LMREGEAEKQKQ
Sbjct: 318 NGRHIPSELFVKDIEKTINKMENKLVRVKNLKLVGSDGWNLMREGEAEKQKQ 369