BLASTX nr result

ID: Coptis25_contig00015809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015809
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20118.3| unnamed protein product [Vitis vinifera]              308   1e-81
emb|CAN62870.1| hypothetical protein VITISV_015928 [Vitis vinifera]   296   3e-78
dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl...   259   3e-67
emb|CAN68020.1| hypothetical protein VITISV_003621 [Vitis vinifera]   249   6e-64
emb|CAN69553.1| hypothetical protein VITISV_009018 [Vitis vinifera]   244   1e-62

>emb|CBI20118.3| unnamed protein product [Vitis vinifera]
          Length = 1354

 Score =  308 bits (788), Expect = 1e-81
 Identities = 148/229 (64%), Positives = 181/229 (79%)
 Frame = -1

Query: 772  RYYYLYLLHDKSQFVNVVEIFINEIERQLDKKMKIIRSDRSGEFYGRYDEIGQHRSLFAK 593
            RY Y+YL+H+KSQ +++ E+FI E+ERQLDKK+KI+RSD+ GE+YGRYDE GQ+   FAK
Sbjct: 893  RYGYVYLMHEKSQAIDIFEMFITEVERQLDKKIKIVRSDQGGEYYGRYDESGQNPGPFAK 952

Query: 592  LLECLGICAQYTMSGFPWQNGVAKRRNRILXXXXXXXXXXXNLPISLWMHALRTAVYILN 413
             LE  GI AQYTM G P QNGVA+RRNR L           ++PISLW  AL+TA+YILN
Sbjct: 953  FLEKHGIRAQYTMPGTPQQNGVAERRNRTLMEMVRSMMSYSSVPISLWGEALKTAMYILN 1012

Query: 412  RVPSKAVPKTPFELWKGWKSSLRHLHIWGFPAEGRVYNLQERKLDPKTISGFFIGYPEKS 233
            RVPSKAVPKTPFELW G K SLRH+HIWG PAE R+YN  E+KLD +T+SG+FIGYP+KS
Sbjct: 1013 RVPSKAVPKTPFELWTGRKPSLRHIHIWGCPAEARIYNPHEKKLDSRTVSGYFIGYPDKS 1072

Query: 232  KRYKFYYFNHTTRIVETGNAKFIENGEVSGSDRIKKVVIQEIRVQFPIP 86
            K Y+FY  NH+ RIVETGNA+F+ENGE+SGS+  +KV I+EIRV  P P
Sbjct: 1073 KGYRFYCPNHSVRIVETGNARFLENGEISGSNEPRKVDIEEIRVDIPPP 1121


>emb|CAN62870.1| hypothetical protein VITISV_015928 [Vitis vinifera]
          Length = 764

 Score =  296 bits (759), Expect = 3e-78
 Identities = 145/230 (63%), Positives = 176/230 (76%), Gaps = 1/230 (0%)
 Frame = -1

Query: 772  RYYYLYLLHDKSQFVNVVEIFINEIERQLDKKMKIIRSDRSGEFYGRYDEIGQHRSLFAK 593
            RY Y+YLLH+KSQ V+ +E++I E+ RQLDK++KIIRS+R GE+YGRYD +GQ    FA 
Sbjct: 419  RYCYIYLLHEKSQAVDALEVYIVEVGRQLDKRVKIIRSNRGGEYYGRYDGLGQRPGPFAI 478

Query: 592  LLECLGICAQYTMSGFPWQNGVAKRRNRILXXXXXXXXXXXNLPISLWMHALRTAVYILN 413
            LLE  GICAQYTM G P QNGVAK+ N  L           +LPISLWM AL+T VY+LN
Sbjct: 479  LLEKHGICAQYTMPGMPQQNGVAKKXNCTLMDMVRSMLSNSSLPISLWMEALKTVVYLLN 538

Query: 412  RVPSKAVPKTPFELWKGWKSSLRHLHIWGFPAEGRVYNLQERKLDPKTISGFFIGYPEKS 233
            RVP+K  PKTPFELW   K SLRHLH+WG P EGR+Y+  E+KLD KTISG+FI YP KS
Sbjct: 539  RVPTKTXPKTPFELWTRRKPSLRHLHVWGCPTEGRIYSPHEKKLDFKTISGYFIDYPMKS 598

Query: 232  KRYKFYYFNHTTRIVETGNAKFIENGEVSGSDRI-KKVVIQEIRVQFPIP 86
            K Y+FYY NH+T+IVETGN +FIENGE+ GSD++ KK  IQE+RVQ P+P
Sbjct: 599  KGYRFYYPNHSTKIVETGNXRFIENGEIRGSDQLQKKTNIQEVRVQVPLP 648


>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
          Length = 1321

 Score =  259 bits (663), Expect = 3e-67
 Identities = 128/215 (59%), Positives = 161/215 (74%)
 Frame = -1

Query: 772  RYYYLYLLHDKSQFVNVVEIFINEIERQLDKKMKIIRSDRSGEFYGRYDEIGQHRSLFAK 593
            RY  +YLLH+K + ++  ++F  E+E Q  K++KI+RSDR GE+YGRY E GQ    FAK
Sbjct: 478  RYMNVYLLHNKYEALDAFKVFKAEVENQCGKQIKIVRSDRGGEYYGRYTENGQAPGPFAK 537

Query: 592  LLECLGICAQYTMSGFPWQNGVAKRRNRILXXXXXXXXXXXNLPISLWMHALRTAVYILN 413
             L+  GI AQYTM G P QNGVA+RRNR L           NLP SLW  AL+TA YILN
Sbjct: 538  FLQEHGIVAQYTMPGSPNQNGVAERRNRTLLDMVRSMLSNSNLPKSLWAEALKTAAYILN 597

Query: 412  RVPSKAVPKTPFELWKGWKSSLRHLHIWGFPAEGRVYNLQERKLDPKTISGFFIGYPEKS 233
            RVP+KAVPKTPFEL+KGWK SL+H+ +WG P+E R+YN QE+KLDP+TISG+FIGY E+S
Sbjct: 598  RVPTKAVPKTPFELFKGWKPSLKHMRVWGCPSEVRIYNPQEKKLDPRTISGYFIGYAERS 657

Query: 232  KRYKFYYFNHTTRIVETGNAKFIENGEVSGSDRIK 128
            K Y+FY  +H TRIVE+ NAKFIEN  +SGSD+++
Sbjct: 658  KGYRFYCPHHITRIVESRNAKFIENDLISGSDQLR 692


>emb|CAN68020.1| hypothetical protein VITISV_003621 [Vitis vinifera]
          Length = 1180

 Score =  249 bits (635), Expect = 6e-64
 Identities = 130/227 (57%), Positives = 159/227 (70%)
 Frame = -1

Query: 772  RYYYLYLLHDKSQFVNVVEIFINEIERQLDKKMKIIRSDRSGEFYGRYDEIGQHRSLFAK 593
            RY Y+YL+H+KSQ +++ E+FI E+ERQLDKK+KI+RSDR GE+YGRYDE GQ+   FAK
Sbjct: 495  RYGYVYLMHEKSQAIDIFEMFITEVERQLDKKIKIVRSDRGGEYYGRYDESGQNPGPFAK 554

Query: 592  LLECLGICAQYTMSGFPWQNGVAKRRNRILXXXXXXXXXXXNLPISLWMHALRTAVYILN 413
             LE  GI AQYTM G P QNGVA+RRNR L           ++PISLW   L+TA+YILN
Sbjct: 555  FLEKHGIRAQYTMPGTPQQNGVAERRNRTLMEMVRSMMSYSSVPISLWGEXLKTAMYILN 614

Query: 412  RVPSKAVPKTPFELWKGWKSSLRHLHIWGFPAEGRVYNLQERKLDPKTISGFFIGYPEKS 233
            RVPSKAVPKTPFELW                AE R+YN  E+KLD +T+SG+FIGYP+KS
Sbjct: 615  RVPSKAVPKTPFELW---------------TAEARIYNPHEKKLDSRTVSGYFIGYPDKS 659

Query: 232  KRYKFYYFNHTTRIVETGNAKFIENGEVSGSDRIKKVVIQEIRVQFP 92
            K            IVETGNA+F+ENGE+SGS+  +KV I+EIRV  P
Sbjct: 660  K-----------GIVETGNARFLENGEISGSNEPRKVDIEEIRVDIP 695


>emb|CAN69553.1| hypothetical protein VITISV_009018 [Vitis vinifera]
          Length = 635

 Score =  244 bits (624), Expect = 1e-62
 Identities = 122/218 (55%), Positives = 155/218 (71%)
 Frame = -1

Query: 772 RYYYLYLLHDKSQFVNVVEIFINEIERQLDKKMKIIRSDRSGEFYGRYDEIGQHRSLFAK 593
           RY YLY+LH+K++ +   ++   E+E+Q  K++KI+RS+RSGE+YGRY E GQ     AK
Sbjct: 287 RYMYLYILHNKNEALEAFKVLKAEVEKQCGKQIKIVRSNRSGEYYGRYLEDGQSPGPLAK 346

Query: 592 LLECLGICAQYTMSGFPWQNGVAKRRNRILXXXXXXXXXXXNLPISLWMHALRTAVYILN 413
            L+  GI AQYTM G P QN VAKRRNR L            LP  LW  AL+T VYILN
Sbjct: 347 FLQEHGIVAQYTMPGSPDQNSVAKRRNRTLLDMVRSMLSSSKLPQFLWTEALQTIVYILN 406

Query: 412 RVPSKAVPKTPFELWKGWKSSLRHLHIWGFPAEGRVYNLQERKLDPKTISGFFIGYPEKS 233
           RVP+KAVPKTPFEL KGWK SL+H+ +WG  +  R+YN QE+KLDP+TISG+FIGY + S
Sbjct: 407 RVPTKAVPKTPFELLKGWKPSLQHMRVWGCSSVVRIYNPQEKKLDPRTISGYFIGYAKNS 466

Query: 232 KRYKFYYFNHTTRIVETGNAKFIENGEVSGSDRIKKVV 119
           K Y+FY  +H TRIVE+ NAKF+E   VSGSD+ + +V
Sbjct: 467 KGYRFYCPSHNTRIVESRNAKFLEYDLVSGSDQFRNIV 504


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