BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015789
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274311.1| PREDICTED: 50S ribosomal protein L9, chlorop...   244   2e-62
ref|XP_004147275.1| PREDICTED: 50S ribosomal protein L9, chlorop...   238   1e-60
ref|XP_003606325.1| 50S ribosomal protein L9 [Medicago truncatul...   225   1e-56
ref|XP_002331481.1| predicted protein [Populus trichocarpa] gi|1...   225   1e-56
emb|CBI17129.3| unnamed protein product [Vitis vinifera]              222   8e-56

>ref|XP_002274311.1| PREDICTED: 50S ribosomal protein L9, chloroplastic [Vitis vinifera]
          Length = 195

 Score =  244 bits (624), Expect = 2e-62
 Identities = 129/195 (66%), Positives = 146/195 (74%), Gaps = 1/195 (0%)
 Frame = -3

Query: 898 MASTTT-LAWNSSSLFSNTTPNINTPSKISHNQNALFIFAQKKAQKTRKIILKEDVAQVG 722
           MAST   L+W+SS+    +  N N P K S N+    + AQKKA+K RKIILKEDVA++G
Sbjct: 1   MASTAAALSWSSSTWLQTSVNNFNQPRKFSDNRMVFVVVAQKKAKKLRKIILKEDVAELG 60

Query: 721 KKGDLKDVKAGFYRNYLHPLGMAQIVTPTLLXXXXXXXXXXXXXXXXXXXXAQQLAQIFE 542
           KKG L DVKAG+YRNYL P+GMAQIVTP LL                    AQQ+A +FE
Sbjct: 61  KKGQLLDVKAGYYRNYLQPMGMAQIVTPLLLKEMRMEEERIEAEKKRVKEEAQQMALMFE 120

Query: 541 TVGAFKVKRKGGKNKQIFGSVTPQDLVDIIKAQIQRDVDKRFVSLPEIRETGEYIAELKL 362
           TVGAFKVKRKGGK KQIFGSVT QDL DIIKAQ+QRDVDKR VSLPEIRETGEY+AELKL
Sbjct: 121 TVGAFKVKRKGGKGKQIFGSVTAQDLTDIIKAQLQRDVDKRIVSLPEIRETGEYVAELKL 180

Query: 361 HPEVTARIRVNVYAN 317
           HPEVTAR+R+NVYAN
Sbjct: 181 HPEVTARVRLNVYAN 195


>ref|XP_004147275.1| PREDICTED: 50S ribosomal protein L9, chloroplastic-like [Cucumis
           sativus]
          Length = 198

 Score =  238 bits (608), Expect = 1e-60
 Identities = 129/198 (65%), Positives = 147/198 (74%), Gaps = 4/198 (2%)
 Frame = -3

Query: 898 MAS-TTTLAWNSSSL---FSNTTPNINTPSKISHNQNALFIFAQKKAQKTRKIILKEDVA 731
           MAS TT L+W+SS L     N   NI   +K S+ + A+ + AQKKA K+RKIILKEDVA
Sbjct: 1   MASITTALSWSSSLLDMGLPNVAGNIEETAKFSYGRTAMVVVAQKKASKSRKIILKEDVA 60

Query: 730 QVGKKGDLKDVKAGFYRNYLHPLGMAQIVTPTLLXXXXXXXXXXXXXXXXXXXXAQQLAQ 551
            +GKKG L DVKAG+YRNYL P+G AQIVTP LL                    AQQLA 
Sbjct: 61  DLGKKGQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLAL 120

Query: 550 IFETVGAFKVKRKGGKNKQIFGSVTPQDLVDIIKAQIQRDVDKRFVSLPEIRETGEYIAE 371
           IF+TVGAFKVKRKGGK KQIFG+VT QDLVDIIKAQ+QRD+DKR V LPEIRETGEY+AE
Sbjct: 121 IFQTVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVAE 180

Query: 370 LKLHPEVTARIRVNVYAN 317
           LKLHPEVTAR+RVNV+AN
Sbjct: 181 LKLHPEVTARVRVNVFAN 198


>ref|XP_003606325.1| 50S ribosomal protein L9 [Medicago truncatula]
           gi|217069924|gb|ACJ83322.1| unknown [Medicago
           truncatula] gi|355507380|gb|AES88522.1| 50S ribosomal
           protein L9 [Medicago truncatula]
           gi|388495282|gb|AFK35707.1| unknown [Medicago
           truncatula]
          Length = 192

 Score =  225 bits (574), Expect = 1e-56
 Identities = 125/194 (64%), Positives = 142/194 (73%)
 Frame = -3

Query: 898 MASTTTLAWNSSSLFSNTTPNINTPSKISHNQNALFIFAQKKAQKTRKIILKEDVAQVGK 719
           MAS++TL+  S  L  + T N+NT S+ S+  +   IFAQKKA+KTRKIILKED+  VGK
Sbjct: 1   MASSSTLS--SLPLQHSFTSNLNTSSQFSNKTSRFLIFAQKKAKKTRKIILKEDILNVGK 58

Query: 718 KGDLKDVKAGFYRNYLHPLGMAQIVTPTLLXXXXXXXXXXXXXXXXXXXXAQQLAQIFET 539
           KG+L DVKAGF+RNYL P G AQI T  LL                    A QLAQI E+
Sbjct: 59  KGELLDVKAGFFRNYLFPSGKAQIATADLLKELKIEEERIEAEKQRVKEEALQLAQILES 118

Query: 538 VGAFKVKRKGGKNKQIFGSVTPQDLVDIIKAQIQRDVDKRFVSLPEIRETGEYIAELKLH 359
           VGAFKVKRKGGK KQIFGSVT QDLVDIIKAQ+QR+VDKR V LPEIRETGEYIAELKLH
Sbjct: 119 VGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQREVDKRIVELPEIRETGEYIAELKLH 178

Query: 358 PEVTARIRVNVYAN 317
           PEVTA++ VNV AN
Sbjct: 179 PEVTAKVSVNVLAN 192


>ref|XP_002331481.1| predicted protein [Populus trichocarpa] gi|118488503|gb|ABK96065.1|
           unknown [Populus trichocarpa]
           gi|222873559|gb|EEF10690.1| predicted protein [Populus
           trichocarpa]
          Length = 198

 Score =  225 bits (573), Expect = 1e-56
 Identities = 123/192 (64%), Positives = 138/192 (71%)
 Frame = -3

Query: 892 STTTLAWNSSSLFSNTTPNINTPSKISHNQNALFIFAQKKAQKTRKIILKEDVAQVGKKG 713
           + TTL+  SSS         N  SK    +  + + AQKKA+KTRKIILKEDV  +GKKG
Sbjct: 7   AATTLSCTSSSWLHGFVGPTNEISKFPDKRIPMLVLAQKKAKKTRKIILKEDVTDLGKKG 66

Query: 712 DLKDVKAGFYRNYLHPLGMAQIVTPTLLXXXXXXXXXXXXXXXXXXXXAQQLAQIFETVG 533
            L DVKAGFYRN+L P G AQIVTP L+                    AQQLA IFETVG
Sbjct: 67  QLVDVKAGFYRNFLLPTGKAQIVTPGLVKEMRMEEERIEAEKKRVKEEAQQLALIFETVG 126

Query: 532 AFKVKRKGGKNKQIFGSVTPQDLVDIIKAQIQRDVDKRFVSLPEIRETGEYIAELKLHPE 353
           AFKVKRKGGK +QIFG+VT QDLVDIIKAQIQRDVDKR VSLP+IRETGEYIAELKLHPE
Sbjct: 127 AFKVKRKGGKGRQIFGTVTAQDLVDIIKAQIQRDVDKRIVSLPDIRETGEYIAELKLHPE 186

Query: 352 VTARIRVNVYAN 317
           VTA++R+NVYAN
Sbjct: 187 VTAQVRLNVYAN 198


>emb|CBI17129.3| unnamed protein product [Vitis vinifera]
          Length = 162

 Score =  222 bits (566), Expect = 8e-56
 Identities = 115/158 (72%), Positives = 127/158 (80%)
 Frame = -3

Query: 790 IFAQKKAQKTRKIILKEDVAQVGKKGDLKDVKAGFYRNYLHPLGMAQIVTPTLLXXXXXX 611
           + AQKKA+K RKIILKEDVA++GKKG L DVKAG+YRNYL P+GMAQIVTP LL      
Sbjct: 5   VVAQKKAKKLRKIILKEDVAELGKKGQLLDVKAGYYRNYLQPMGMAQIVTPLLLKEMRME 64

Query: 610 XXXXXXXXXXXXXXAQQLAQIFETVGAFKVKRKGGKNKQIFGSVTPQDLVDIIKAQIQRD 431
                         AQQ+A +FETVGAFKVKRKGGK KQIFGSVT QDL DIIKAQ+QRD
Sbjct: 65  EERIEAEKKRVKEEAQQMALMFETVGAFKVKRKGGKGKQIFGSVTAQDLTDIIKAQLQRD 124

Query: 430 VDKRFVSLPEIRETGEYIAELKLHPEVTARIRVNVYAN 317
           VDKR VSLPEIRETGEY+AELKLHPEVTAR+R+NVYAN
Sbjct: 125 VDKRIVSLPEIRETGEYVAELKLHPEVTARVRLNVYAN 162