BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015763
         (1044 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]               66   1e-08
emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]    61   4e-07
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   7e-07
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   1e-06
gb|AAP54692.2| retrotransposon protein, putative, unclassified [...    58   3e-06

>gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]
          Length = 238

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 30/95 (31%), Positives = 53/95 (55%)
 Frame = -1

Query: 339 NCRGIGISTIVHNLKDLIRQHQPDMICLLETKAKEKKIEKVGNEINYMGRLCLPAVGACG 160
           NC+G+GI   V  LK++ R++ PD+ICL ETK +   +     E+ +   + +P++G  G
Sbjct: 60  NCQGLGIDLTVRRLKEINRKYLPDVICLSETKQRNDYVRDTCCELGFSNFVMVPSMGLSG 119

Query: 159 GLAIFWKDEVQLNILGATQNHVTGMSLCYISFGDI 55
           GL + WK  V +++   + N V     CY+   ++
Sbjct: 120 GLVVLWKPSVHISVSFNSPNLVD----CYVQSNEV 150


>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 28/85 (32%), Positives = 49/85 (57%)
 Frame = -1

Query: 348 IT*NCRGIGISTIVHNLKDLIRQHQPDMICLLETKAKEKKIEKVGNEINYMGRLCLPAVG 169
           I+ NCRG+G    V  L ++ +  +PD I L+ET     ++EK+ +++ + G  C+  VG
Sbjct: 310 ISWNCRGLGNPRTVLALCEINKSRKPDFIFLIETLVHSAQVEKLKSKLGFEGAFCVDRVG 369

Query: 168 ACGGLAIFWKDEVQLNILGATQNHV 94
             GGLA  W+     ++L  +Q+H+
Sbjct: 370 RGGGLAFLWRKAGMFSLLXYSQSHI 394


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 26/90 (28%), Positives = 52/90 (57%)
 Frame = -1

Query: 357 LSMIT*NCRGIGISTIVHNLKDLIRQHQPDMICLLETKAKEKKIEKVGNEINYMGRLCLP 178
           ++++  NCRG+G    V  L+    Q  PD+I + ET   + ++E + + + +     + 
Sbjct: 1   MNILCWNCRGLGNPWSVRQLRSWSNQFAPDIIFVSETMINKIEVEALKSWLGFSNAFGVA 60

Query: 177 AVGACGGLAIFWKDEVQLNILGATQNHVTG 88
           +VG  GGL ++WK+EV  +++  +Q+H+ G
Sbjct: 61  SVGRAGGLCLYWKEEVMFSLVSFSQHHICG 90


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = -1

Query: 339 NCRGIGISTIVHNLKDLIRQHQPDMICLLETKAKEKKIEKVGNEINYMGRLCLPAVGACG 160
           NC+G+G    V  L+ L+  + PD + + ETK  +  +E+    + + G   +  VG  G
Sbjct: 7   NCQGMGNPWTVRQLRRLMASNTPDSLFMSETKVTKNIVEQKKESLGFSGAFGVSCVGRAG 66

Query: 159 GLAIFWKDE-VQLNILGATQNHVTG 88
           GL +FWK+E +   ++  +QNH+ G
Sbjct: 67  GLCMFWKEETISFRMVSFSQNHICG 91


>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1585

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 28/91 (30%), Positives = 50/91 (54%)
 Frame = -1

Query: 366 ADSLSMIT*NCRGIGISTIVHNLKDLIRQHQPDMICLLETKAKEKKIEKVGNEINYMGRL 187
           A +++ ++ NCRGIG +T V  L  L+++     + L ET+    KI+++ N +   G  
Sbjct: 459 AGAMNCLSWNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFA 518

Query: 186 CLPAVGACGGLAIFWKDEVQLNILGATQNHV 94
            + + G  GGLA+FW + V + IL   +  +
Sbjct: 519 GVSSDGMSGGLALFWHESVHVEILNKNERFI 549