BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015756
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25423.3| unnamed protein product [Vitis vinifera]              457   e-126
ref|XP_002273715.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   457   e-126
ref|XP_003552218.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   448   e-123
ref|XP_003538481.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   447   e-123
ref|XP_002312182.1| predicted protein [Populus trichocarpa] gi|2...   445   e-123

>emb|CBI25423.3| unnamed protein product [Vitis vinifera]
          Length = 576

 Score =  457 bits (1175), Expect = e-126
 Identities = 229/296 (77%), Positives = 268/296 (90%), Gaps = 2/296 (0%)
 Frame = +1

Query: 67  NKALTNLRFSDLEPPLSPPVLEALSKAGFNFCTPVQASTIPLLCTFKDVSVDAATGSGKT 246
           N+ALT  RFS+L PPLS PVLEAL+++GF+FCTPVQA+TIPLLC+FKDV+VDAATGSGKT
Sbjct: 12  NRALTTTRFSELNPPLSEPVLEALTQSGFHFCTPVQAATIPLLCSFKDVAVDAATGSGKT 71

Query: 247 LAFVVPLVEILRRSSETPKPHKVMGVILSPTRELSTQIYHVAQTFVETLSNVRSMLLVGG 426
           LAFVVPLVEILRR+S  PKPH+V+GVILSPTRELS+QIY+VAQ F+ TL NV+S+LLVGG
Sbjct: 72  LAFVVPLVEILRRASSAPKPHQVLGVILSPTRELSSQIYNVAQPFISTLPNVKSVLLVGG 131

Query: 427 TSLRADMKSIEEEGANLLIGTPGRIYDIMERMDILDFRNLEILILDEADRLLEMGFQKQI 606
             +++D+K IEEEGANLLIGTPGR+YDIMERMD+LDFRNLEILILDEADRLL+MGFQKQI
Sbjct: 132 VEVKSDLKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILILDEADRLLDMGFQKQI 191

Query: 607 NSIISHLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRTEMKMLD--ISSKQLASSK 780
            SII+ LPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVR E K L+  +SS+QLASSK
Sbjct: 192 TSIIARLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEAKSLNDSVSSQQLASSK 251

Query: 781 TPLGLHNEYLKCEAEKKSSQLVDFITKHVNEKMIIYFMTCACVDYWWVVLQQLAAL 948
           TP GL+ EYL+CEA+KK SQLVD + K+ ++K+IIYFMTCACVDYW V+L +L+ L
Sbjct: 252 TPSGLNIEYLECEADKKPSQLVDLLIKNKSKKIIIYFMTCACVDYWGVILPRLSVL 307


>ref|XP_002273715.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Vitis
           vinifera]
          Length = 595

 Score =  457 bits (1175), Expect = e-126
 Identities = 229/296 (77%), Positives = 268/296 (90%), Gaps = 2/296 (0%)
 Frame = +1

Query: 67  NKALTNLRFSDLEPPLSPPVLEALSKAGFNFCTPVQASTIPLLCTFKDVSVDAATGSGKT 246
           N+ALT  RFS+L PPLS PVLEAL+++GF+FCTPVQA+TIPLLC+FKDV+VDAATGSGKT
Sbjct: 12  NRALTTTRFSELNPPLSEPVLEALTQSGFHFCTPVQAATIPLLCSFKDVAVDAATGSGKT 71

Query: 247 LAFVVPLVEILRRSSETPKPHKVMGVILSPTRELSTQIYHVAQTFVETLSNVRSMLLVGG 426
           LAFVVPLVEILRR+S  PKPH+V+GVILSPTRELS+QIY+VAQ F+ TL NV+S+LLVGG
Sbjct: 72  LAFVVPLVEILRRASSAPKPHQVLGVILSPTRELSSQIYNVAQPFISTLPNVKSVLLVGG 131

Query: 427 TSLRADMKSIEEEGANLLIGTPGRIYDIMERMDILDFRNLEILILDEADRLLEMGFQKQI 606
             +++D+K IEEEGANLLIGTPGR+YDIMERMD+LDFRNLEILILDEADRLL+MGFQKQI
Sbjct: 132 VEVKSDLKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILILDEADRLLDMGFQKQI 191

Query: 607 NSIISHLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRTEMKMLD--ISSKQLASSK 780
            SII+ LPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVR E K L+  +SS+QLASSK
Sbjct: 192 TSIIARLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEAKSLNDSVSSQQLASSK 251

Query: 781 TPLGLHNEYLKCEAEKKSSQLVDFITKHVNEKMIIYFMTCACVDYWWVVLQQLAAL 948
           TP GL+ EYL+CEA+KK SQLVD + K+ ++K+IIYFMTCACVDYW V+L +L+ L
Sbjct: 252 TPSGLNIEYLECEADKKPSQLVDLLIKNKSKKIIIYFMTCACVDYWGVILPRLSVL 307


>ref|XP_003552218.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Glycine
           max]
          Length = 589

 Score =  448 bits (1152), Expect = e-123
 Identities = 226/296 (76%), Positives = 260/296 (87%), Gaps = 2/296 (0%)
 Frame = +1

Query: 67  NKALTNLRFSDLEPPLSPPVLEALSKAGFNFCTPVQASTIPLLCTFKDVSVDAATGSGKT 246
           NKALT+ RFSDL PPLS PVL+ALS +GF FCTPVQA+TIPLLC+FKDV+VDAATGSGKT
Sbjct: 7   NKALTSTRFSDLNPPLSEPVLQALSHSGFEFCTPVQAATIPLLCSFKDVAVDAATGSGKT 66

Query: 247 LAFVVPLVEILRRSSETPKPHKVMGVILSPTRELSTQIYHVAQTFVETLSNVRSMLLVGG 426
           LAFVVPLVEILRRSS  PKPH+V+G+I+SPTRELSTQIYHVAQ F+ TL+NV+SMLLVGG
Sbjct: 67  LAFVVPLVEILRRSSSHPKPHQVLGIIISPTRELSTQIYHVAQPFISTLANVKSMLLVGG 126

Query: 427 TSLRADMKSIEEEGANLLIGTPGRIYDIMERMDILDFRNLEILILDEADRLLEMGFQKQI 606
             ++AD+K IEEEGAN+LIGTPGR+YDIM RMD+LD +NLEILILDEADRLL+MGFQKQI
Sbjct: 127 AEVKADLKKIEEEGANILIGTPGRLYDIMNRMDVLDLKNLEILILDEADRLLDMGFQKQI 186

Query: 607 NSIISHLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRTEMKMLD--ISSKQLASSK 780
            SII+ LPKLRRTGLFSATQTEA+EEL+KAGLRNPVRVEVR E K  +   SSKQ  SSK
Sbjct: 187 TSIITLLPKLRRTGLFSATQTEAIEELAKAGLRNPVRVEVRAETKSENGPASSKQPESSK 246

Query: 781 TPLGLHNEYLKCEAEKKSSQLVDFITKHVNEKMIIYFMTCACVDYWWVVLQQLAAL 948
           TP GLH EYL+CEA+KK SQLV  + K++++K+IIYFMTCACVDYW  VL  L+ L
Sbjct: 247 TPSGLHIEYLECEADKKPSQLVHILIKNLSKKIIIYFMTCACVDYWGAVLPCLSVL 302


>ref|XP_003538481.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like isoform 1
           [Glycine max]
          Length = 589

 Score =  447 bits (1149), Expect = e-123
 Identities = 225/296 (76%), Positives = 259/296 (87%), Gaps = 2/296 (0%)
 Frame = +1

Query: 67  NKALTNLRFSDLEPPLSPPVLEALSKAGFNFCTPVQASTIPLLCTFKDVSVDAATGSGKT 246
           NKALT++RFSDL PPLS PVL+ALS +GF+FCTPVQA+TIPLLC+FKDV+VDAATGSGKT
Sbjct: 7   NKALTSVRFSDLNPPLSEPVLQALSHSGFDFCTPVQAATIPLLCSFKDVAVDAATGSGKT 66

Query: 247 LAFVVPLVEILRRSSETPKPHKVMGVILSPTRELSTQIYHVAQTFVETLSNVRSMLLVGG 426
           LAFV+PLVEILRRSS  PKPHKV+G+I+SPTRELSTQIYHVAQ+F+ TL NV+SMLLVGG
Sbjct: 67  LAFVIPLVEILRRSSSHPKPHKVLGIIISPTRELSTQIYHVAQSFISTLMNVKSMLLVGG 126

Query: 427 TSLRADMKSIEEEGANLLIGTPGRIYDIMERMDILDFRNLEILILDEADRLLEMGFQKQI 606
             ++ D+K IEEEGAN+LIGTPGR+YDIM RMD+LD +NLEILILDEADRLL+MGFQKQI
Sbjct: 127 AEVKTDIKKIEEEGANILIGTPGRLYDIMNRMDVLDLKNLEILILDEADRLLDMGFQKQI 186

Query: 607 NSIISHLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRTEMKML--DISSKQLASSK 780
            SIIS LPKLRRTGLFSATQTEA+EEL+KAGLRNPVRVEVR E K      SSKQ  SSK
Sbjct: 187 TSIISLLPKLRRTGLFSATQTEAIEELAKAGLRNPVRVEVRAETKSEKGPASSKQPESSK 246

Query: 781 TPLGLHNEYLKCEAEKKSSQLVDFITKHVNEKMIIYFMTCACVDYWWVVLQQLAAL 948
           TP GLH EYL+CE +KK SQL+D + K+ ++K+IIYFMTCACVDYW  VL  L+ L
Sbjct: 247 TPSGLHIEYLECEEDKKPSQLLDILIKNRSKKIIIYFMTCACVDYWGAVLPCLSVL 302


>ref|XP_002312182.1| predicted protein [Populus trichocarpa] gi|222852002|gb|EEE89549.1|
           predicted protein [Populus trichocarpa]
          Length = 592

 Score =  445 bits (1145), Expect = e-123
 Identities = 225/301 (74%), Positives = 267/301 (88%), Gaps = 2/301 (0%)
 Frame = +1

Query: 52  EEGTRNKALTNLRFSDLEPPLSPPVLEALSKAGFNFCTPVQASTIPLLCTFKDVSVDAAT 231
           E    N+ALTN RFSDL+P +S PVLEAL+ +GF++CTPVQA+TIPLLC++KDV+VDAAT
Sbjct: 5   ESPNPNRALTNTRFSDLKPSISEPVLEALTNSGFDYCTPVQAATIPLLCSYKDVAVDAAT 64

Query: 232 GSGKTLAFVVPLVEILRRSSETPKPHKVMGVILSPTRELSTQIYHVAQTFVETLSNVRSM 411
           GSGKTLAFVVPLVEILRRSS +PKPH+VMG+I+SPTRELS+QIY+VAQ F+ TLSN +SM
Sbjct: 65  GSGKTLAFVVPLVEILRRSS-SPKPHQVMGIIISPTRELSSQIYNVAQPFIATLSNFKSM 123

Query: 412 LLVGGTSLRADMKSIEEEGANLLIGTPGRIYDIMERMDILDFRNLEILILDEADRLLEMG 591
           LLVGG  ++AD+K IEEEGANLLIGTPGR++DIM+R+D+LDFRNLE+LILDEADRLL+MG
Sbjct: 124 LLVGGMDVKADVKMIEEEGANLLIGTPGRLFDIMDRVDVLDFRNLEVLILDEADRLLDMG 183

Query: 592 FQKQINSIISHLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRTEMKMLD--ISSKQ 765
           FQKQ+NSIIS LPKLRRTGLFSATQTEAVEELSKAGLRNPV+VEVR E K L+  +S +Q
Sbjct: 184 FQKQLNSIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVKVEVRAETKSLNNSVSGQQ 243

Query: 766 LASSKTPLGLHNEYLKCEAEKKSSQLVDFITKHVNEKMIIYFMTCACVDYWWVVLQQLAA 945
           LA SKTP GL  EYL+CEA+KK SQLVD + K+ ++K+IIYFMTCACVDYW VVL +L  
Sbjct: 244 LAPSKTPSGLLLEYLECEADKKPSQLVDLLVKNKSKKIIIYFMTCACVDYWGVVLPRLTV 303

Query: 946 L 948
           L
Sbjct: 304 L 304