BLASTX nr result

ID: Coptis25_contig00015743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015743
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284938.1| PREDICTED: protein SSH4-like [Vitis vinifera]     133   1e-29
ref|XP_002510180.1| conserved hypothetical protein [Ricinus comm...   130   9e-29
emb|CBI19487.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_003603080.1| Protein ssh4 [Medicago truncatula] gi|355492...   115   3e-24
ref|XP_003589150.1| Protein ssh4 [Medicago truncatula] gi|355478...   112   3e-23

>ref|XP_002284938.1| PREDICTED: protein SSH4-like [Vitis vinifera]
          Length = 305

 Score =  133 bits (335), Expect = 1e-29
 Identities = 59/83 (71%), Positives = 72/83 (86%)
 Frame = -2

Query: 249 DELKIAIKDEGRSEAVSMCLGLTVGGSLPKKLPGTYPGSIGFNANGSVYLDGIKLVFENE 70
           +E+K+  KD+G+ E V + +GLT GGSLP KLPG+YPGSIGFN+NGSVYLDGIKLVFE+E
Sbjct: 92  EEMKLGSKDDGKGEVVMLSVGLTAGGSLPLKLPGSYPGSIGFNSNGSVYLDGIKLVFESE 151

Query: 69  KAEWESTDRVIGCGFNPSQKKIF 1
           K EWE  D+VIGCGF+PSQKK+F
Sbjct: 152 KEEWERADKVIGCGFDPSQKKVF 174


>ref|XP_002510180.1| conserved hypothetical protein [Ricinus communis]
           gi|223550881|gb|EEF52367.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 480

 Score =  130 bits (328), Expect = 9e-29
 Identities = 61/84 (72%), Positives = 73/84 (86%), Gaps = 1/84 (1%)
 Frame = -2

Query: 249 DELKIAI-KDEGRSEAVSMCLGLTVGGSLPKKLPGTYPGSIGFNANGSVYLDGIKLVFEN 73
           +ELK+A  KDEG+ EAV + LGLT GGSLP +LPG+YPGSIGFN+NGSVYLDGIKLVFE+
Sbjct: 258 EELKLATGKDEGKDEAVMLSLGLTTGGSLPLRLPGSYPGSIGFNSNGSVYLDGIKLVFES 317

Query: 72  EKAEWESTDRVIGCGFNPSQKKIF 1
           EK +W S D+VIGCGF+P QKK+F
Sbjct: 318 EKGDWASKDKVIGCGFDPRQKKVF 341


>emb|CBI19487.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score =  117 bits (292), Expect = 1e-24
 Identities = 52/66 (78%), Positives = 60/66 (90%)
 Frame = -2

Query: 198 MCLGLTVGGSLPKKLPGTYPGSIGFNANGSVYLDGIKLVFENEKAEWESTDRVIGCGFNP 19
           + +GLT GGSLP KLPG+YPGSIGFN+NGSVYLDGIKLVFE+EK EWE  D+VIGCGF+P
Sbjct: 2   LSVGLTAGGSLPLKLPGSYPGSIGFNSNGSVYLDGIKLVFESEKEEWERADKVIGCGFDP 61

Query: 18  SQKKIF 1
           SQKK+F
Sbjct: 62  SQKKVF 67


>ref|XP_003603080.1| Protein ssh4 [Medicago truncatula] gi|355492128|gb|AES73331.1|
           Protein ssh4 [Medicago truncatula]
          Length = 469

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/85 (62%), Positives = 71/85 (83%), Gaps = 2/85 (2%)
 Frame = -2

Query: 249 DELKIAIKDEG--RSEAVSMCLGLTVGGSLPKKLPGTYPGSIGFNANGSVYLDGIKLVFE 76
           +E+K+  ++ G  ++++V   LGLTVGG +  K+PG+YPGSIGFN+NGSVYLDG+KLVFE
Sbjct: 252 EEMKVDGRENGGKKTDSVMFSLGLTVGGPVVLKVPGSYPGSIGFNSNGSVYLDGMKLVFE 311

Query: 75  NEKAEWESTDRVIGCGFNPSQKKIF 1
           +EKAEW  TD+VIGCGF+P QKK+F
Sbjct: 312 SEKAEWIGTDKVIGCGFDPRQKKVF 336


>ref|XP_003589150.1| Protein ssh4 [Medicago truncatula] gi|355478198|gb|AES59401.1|
           Protein ssh4 [Medicago truncatula]
          Length = 446

 Score =  112 bits (280), Expect = 3e-23
 Identities = 53/83 (63%), Positives = 67/83 (80%)
 Frame = -2

Query: 249 DELKIAIKDEGRSEAVSMCLGLTVGGSLPKKLPGTYPGSIGFNANGSVYLDGIKLVFENE 70
           +E+K+  K  G SE+V   LGLT GG +P ++PGTYP SIGFN+NGSV+LDG+KLVFE+E
Sbjct: 229 EEMKVEGKS-GISESVMFSLGLTGGGGVPLRVPGTYPRSIGFNSNGSVFLDGMKLVFESE 287

Query: 69  KAEWESTDRVIGCGFNPSQKKIF 1
           KA+W  TD VIGCGF+P QKK+F
Sbjct: 288 KAQWVGTDTVIGCGFDPRQKKVF 310


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