BLASTX nr result

ID: Coptis25_contig00015735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015735
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171005.1| PREDICTED: LOW QUALITY PROTEIN: TPR repeat-c...   292   2e-77
ref|XP_004146029.1| PREDICTED: TPR repeat-containing thioredoxin...   292   2e-77
ref|XP_002524280.1| Small glutamine-rich tetratricopeptide repea...   290   7e-77
ref|XP_003541820.1| PREDICTED: TPR repeat-containing thioredoxin...   285   2e-75
gb|ACU18444.1| unknown [Glycine max]                                  285   2e-75

>ref|XP_004171005.1| PREDICTED: LOW QUALITY PROTEIN: TPR repeat-containing thioredoxin
           TTL1-like [Cucumis sativus]
          Length = 698

 Score =  292 bits (748), Expect = 2e-77
 Identities = 140/178 (78%), Positives = 156/178 (87%)
 Frame = -1

Query: 534 ARARARGNDLFKTGNFIEAASAYGEGLKLDPSNSVLYCNRAACWSKLGQWEKSVEDCNKA 355
           ARAR RGNDLFK+  + EA SAYGEGLKLDPSNSVLYCNRAACW KLG WE+S+EDCN+A
Sbjct: 465 ARARTRGNDLFKSERYTEACSAYGEGLKLDPSNSVLYCNRAACWFKLGVWERSIEDCNQA 524

Query: 354 LRIQPSYTKALLRRAASYGKLEKWAESVRDYEILRKELPADNEVAESLFHAQVALKKLRG 175
           L IQP+YTKALLRRAAS  KLEKW E+VRDYE+LR  LP DNEVAESLFHAQVALKK RG
Sbjct: 525 LLIQPTYTKALLRRAASNSKLEKWEEAVRDYEVLRTVLPDDNEVAESLFHAQVALKKSRG 584

Query: 174 EEIHNLKFGGEVEEVSDADQFRAVISLPGTSVVHFKAAANQQCEQISPFMDMLCIRYP 1
           EE+HNLKFGGEVEEVS  DQFRA +S PG +VVHFKAA++ QC+QISPF+D+LC RYP
Sbjct: 585 EEVHNLKFGGEVEEVSSLDQFRAAVSFPGVTVVHFKAASDLQCKQISPFVDILCRRYP 642



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/98 (32%), Positives = 56/98 (57%)
 Frame = -1

Query: 516 GNDLFKTGNFIEAASAYGEGLKLDPSNSVLYCNRAACWSKLGQWEKSVEDCNKALRIQPS 337
           GN+ +K G+F EA S Y   + + P+N+    NRAA  + LG+  ++V +C +A+R+ P+
Sbjct: 233 GNEQYKKGHFAEALSLYDRAIAISPANAAYRSNRAAALTGLGRLGEAVSECEEAVRLDPN 292

Query: 336 YTKALLRRAASYGKLEKWAESVRDYEILRKELPADNEV 223
           Y +A  R A+ + +L +  E+ R +       P  NE+
Sbjct: 293 YIRAHQRLASLFRRLGQ-VENARKHLCFPGVQPDPNEL 329


>ref|XP_004146029.1| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Cucumis
           sativus]
          Length = 698

 Score =  292 bits (748), Expect = 2e-77
 Identities = 140/178 (78%), Positives = 156/178 (87%)
 Frame = -1

Query: 534 ARARARGNDLFKTGNFIEAASAYGEGLKLDPSNSVLYCNRAACWSKLGQWEKSVEDCNKA 355
           ARAR RGNDLFK+  + EA SAYGEGLKLDPSNSVLYCNRAACW KLG WE+S+EDCN+A
Sbjct: 465 ARARTRGNDLFKSERYTEACSAYGEGLKLDPSNSVLYCNRAACWFKLGVWERSIEDCNQA 524

Query: 354 LRIQPSYTKALLRRAASYGKLEKWAESVRDYEILRKELPADNEVAESLFHAQVALKKLRG 175
           L IQP+YTKALLRRAAS  KLEKW E+VRDYE+LR  LP DNEVAESLFHAQVALKK RG
Sbjct: 525 LLIQPTYTKALLRRAASNSKLEKWEEAVRDYEVLRTVLPDDNEVAESLFHAQVALKKSRG 584

Query: 174 EEIHNLKFGGEVEEVSDADQFRAVISLPGTSVVHFKAAANQQCEQISPFMDMLCIRYP 1
           EE+HNLKFGGEVEEVS  DQFRA +S PG +VVHFKAA++ QC+QISPF+D+LC RYP
Sbjct: 585 EEVHNLKFGGEVEEVSSLDQFRAAVSFPGVTVVHFKAASDLQCKQISPFVDILCRRYP 642



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/98 (32%), Positives = 56/98 (57%)
 Frame = -1

Query: 516 GNDLFKTGNFIEAASAYGEGLKLDPSNSVLYCNRAACWSKLGQWEKSVEDCNKALRIQPS 337
           GN+ +K G+F EA S Y   + + P+N+    NRAA  + LG+  ++V +C +A+R+ P+
Sbjct: 233 GNEQYKKGHFAEALSLYDRAIAISPANAAYRSNRAAALTGLGRLGEAVSECEEAVRLDPN 292

Query: 336 YTKALLRRAASYGKLEKWAESVRDYEILRKELPADNEV 223
           Y +A  R A+ + +L +  E+ R +       P  NE+
Sbjct: 293 YIRAHQRLASLFRRLGQ-VENARKHLCFPGVQPDPNEL 329


>ref|XP_002524280.1| Small glutamine-rich tetratricopeptide repeat-containing protein A,
           putative [Ricinus communis] gi|223536471|gb|EEF38119.1|
           Small glutamine-rich tetratricopeptide repeat-containing
           protein A, putative [Ricinus communis]
          Length = 640

 Score =  290 bits (743), Expect = 7e-77
 Identities = 137/177 (77%), Positives = 158/177 (89%)
 Frame = -1

Query: 531 RARARGNDLFKTGNFIEAASAYGEGLKLDPSNSVLYCNRAACWSKLGQWEKSVEDCNKAL 352
           RARARGNDLFK+  F EA SAYGEGL+LDPSNSVLYCNRAACW KLG WE+S++DCN+AL
Sbjct: 408 RARARGNDLFKSERFTEACSAYGEGLRLDPSNSVLYCNRAACWFKLGVWERSIDDCNQAL 467

Query: 351 RIQPSYTKALLRRAASYGKLEKWAESVRDYEILRKELPADNEVAESLFHAQVALKKLRGE 172
           RIQP+YTKALLRRAAS  KLE+WA++VRDYE+LRKELP DNEVAESLFHAQVALKK RGE
Sbjct: 468 RIQPNYTKALLRRAASNSKLERWADAVRDYEVLRKELPDDNEVAESLFHAQVALKKSRGE 527

Query: 171 EIHNLKFGGEVEEVSDADQFRAVISLPGTSVVHFKAAANQQCEQISPFMDMLCIRYP 1
           E++N+KFGGEVEE+   +QFRA ISLPG SVVHFK+++N  C+QISPF+D LC RYP
Sbjct: 528 EVYNMKFGGEVEEILGLEQFRAAISLPGVSVVHFKSSSNLHCKQISPFVDALCGRYP 584



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/75 (34%), Positives = 45/75 (60%)
 Frame = -1

Query: 516 GNDLFKTGNFIEAASAYGEGLKLDPSNSVLYCNRAACWSKLGQWEKSVEDCNKALRIQPS 337
           GN+++K GNF EA   Y   + + P N+    NRAA    LG+  ++V++C +A+R+ P+
Sbjct: 175 GNEMYKKGNFGEALVLYDRAIGMVPGNAAYRSNRAAALMGLGRVAEAVKECEEAVRLDPN 234

Query: 336 YTKALLRRAASYGKL 292
           Y +A  R  + + +L
Sbjct: 235 YWRAHQRLGSLFNRL 249


>ref|XP_003541820.1| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Glycine
           max]
          Length = 692

 Score =  285 bits (730), Expect = 2e-75
 Identities = 138/178 (77%), Positives = 155/178 (87%)
 Frame = -1

Query: 534 ARARARGNDLFKTGNFIEAASAYGEGLKLDPSNSVLYCNRAACWSKLGQWEKSVEDCNKA 355
           ARAR RGNDLFK+  + EA  AYGEGL+LDPSNSVLYCNRAACW KLGQWE+S+ED N+A
Sbjct: 459 ARARVRGNDLFKSERYTEACLAYGEGLRLDPSNSVLYCNRAACWFKLGQWERSIEDSNQA 518

Query: 354 LRIQPSYTKALLRRAASYGKLEKWAESVRDYEILRKELPADNEVAESLFHAQVALKKLRG 175
           L IQP+YTKALLRRAAS  KLE+W E+V+DYEILRKELP DNEVAESLFHAQVALKK RG
Sbjct: 519 LHIQPNYTKALLRRAASNSKLERWEEAVKDYEILRKELPNDNEVAESLFHAQVALKKSRG 578

Query: 174 EEIHNLKFGGEVEEVSDADQFRAVISLPGTSVVHFKAAANQQCEQISPFMDMLCIRYP 1
           EE+ NLKFGGEVEEVS  +QFRA ISLPG SVVHF+ A+N QC+QISPF++ LC RYP
Sbjct: 579 EEVTNLKFGGEVEEVSGLEQFRAAISLPGVSVVHFEVASNSQCKQISPFVNTLCGRYP 636



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/75 (34%), Positives = 48/75 (64%)
 Frame = -1

Query: 516 GNDLFKTGNFIEAASAYGEGLKLDPSNSVLYCNRAACWSKLGQWEKSVEDCNKALRIQPS 337
           GN+ +K GNF++A S Y   + + P+++    NRAA  + LG+  ++V +C +A+R+ P+
Sbjct: 227 GNECYKRGNFVDALSLYDRAIAMSPASAAYRSNRAAALTGLGRLGEAVRECEEAVRLDPN 286

Query: 336 YTKALLRRAASYGKL 292
           Y +A  R A+ + +L
Sbjct: 287 YGRAHQRLASLFLRL 301


>gb|ACU18444.1| unknown [Glycine max]
          Length = 377

 Score =  285 bits (730), Expect = 2e-75
 Identities = 138/178 (77%), Positives = 155/178 (87%)
 Frame = -1

Query: 534 ARARARGNDLFKTGNFIEAASAYGEGLKLDPSNSVLYCNRAACWSKLGQWEKSVEDCNKA 355
           ARAR RGNDLFK+  + EA  AYGEGL+LDPSNSVLYCNRAACW KLGQWE+S+ED N+A
Sbjct: 144 ARARVRGNDLFKSERYTEACLAYGEGLRLDPSNSVLYCNRAACWFKLGQWERSIEDSNQA 203

Query: 354 LRIQPSYTKALLRRAASYGKLEKWAESVRDYEILRKELPADNEVAESLFHAQVALKKLRG 175
           L IQP+YTKALLRRAAS  KLE+W E+V+DYEILRKELP DNEVAESLFHAQVALKK RG
Sbjct: 204 LHIQPNYTKALLRRAASNSKLERWEEAVKDYEILRKELPNDNEVAESLFHAQVALKKSRG 263

Query: 174 EEIHNLKFGGEVEEVSDADQFRAVISLPGTSVVHFKAAANQQCEQISPFMDMLCIRYP 1
           EE+ NLKFGGEVEEVS  +QFRA ISLPG SVVHF+ A+N QC+QISPF++ LC RYP
Sbjct: 264 EEVTNLKFGGEVEEVSGLEQFRAAISLPGVSVVHFEVASNSQCKQISPFVNTLCGRYP 321


Top