BLASTX nr result
ID: Coptis25_contig00015713
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00015713 (646 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243... 126 4e-27 emb|CBI15934.3| unnamed protein product [Vitis vinifera] 126 4e-27 ref|XP_002313990.1| predicted protein [Populus trichocarpa] gi|2... 125 5e-27 emb|CBI15935.3| unnamed protein product [Vitis vinifera] 122 6e-26 ref|XP_003615709.1| Chromodomain helicase-DNA-binding protein [M... 113 3e-23 >ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243375 [Vitis vinifera] Length = 1332 Score = 126 bits (316), Expect = 4e-27 Identities = 60/79 (75%), Positives = 66/79 (83%) Frame = -1 Query: 646 FQYRQRGMCRILMDVLEKKLAELGVEKLVLPAVPQTLHAWTTSFGFSKMTSSERLTFLDY 467 FQYR+ GMC ILM+ LEKKL ELGVE+LVLPAVP L+ WTTSFGFSKMT SERL FLDY Sbjct: 1146 FQYRRLGMCHILMNELEKKLMELGVERLVLPAVPSVLNTWTTSFGFSKMTDSERLRFLDY 1205 Query: 466 TFLDFQDMTMCQKILRKAP 410 +FLDFQD MCQK+L K P Sbjct: 1206 SFLDFQDTVMCQKLLMKIP 1224 >emb|CBI15934.3| unnamed protein product [Vitis vinifera] Length = 994 Score = 126 bits (316), Expect = 4e-27 Identities = 60/79 (75%), Positives = 66/79 (83%) Frame = -1 Query: 646 FQYRQRGMCRILMDVLEKKLAELGVEKLVLPAVPQTLHAWTTSFGFSKMTSSERLTFLDY 467 FQYR+ GMC ILM+ LEKKL ELGVE+LVLPAVP L+ WTTSFGFSKMT SERL FLDY Sbjct: 894 FQYRRLGMCHILMNELEKKLMELGVERLVLPAVPSVLNTWTTSFGFSKMTDSERLRFLDY 953 Query: 466 TFLDFQDMTMCQKILRKAP 410 +FLDFQD MCQK+L K P Sbjct: 954 SFLDFQDTVMCQKLLMKIP 972 >ref|XP_002313990.1| predicted protein [Populus trichocarpa] gi|222850398|gb|EEE87945.1| predicted protein [Populus trichocarpa] Length = 978 Score = 125 bits (315), Expect = 5e-27 Identities = 60/77 (77%), Positives = 66/77 (85%) Frame = -1 Query: 646 FQYRQRGMCRILMDVLEKKLAELGVEKLVLPAVPQTLHAWTTSFGFSKMTSSERLTFLDY 467 FQ+RQ GMCRILMDVLEKKL ELGV++LVLPAVP L+ WT SFGFSKMT SERL F+DY Sbjct: 902 FQFRQLGMCRILMDVLEKKLMELGVQRLVLPAVPGVLNTWTGSFGFSKMTDSERLQFVDY 961 Query: 466 TFLDFQDMTMCQKILRK 416 TFLDFQD MCQK+L K Sbjct: 962 TFLDFQDTVMCQKLLMK 978 >emb|CBI15935.3| unnamed protein product [Vitis vinifera] Length = 687 Score = 122 bits (306), Expect = 6e-26 Identities = 57/80 (71%), Positives = 64/80 (80%) Frame = -1 Query: 643 QYRQRGMCRILMDVLEKKLAELGVEKLVLPAVPQTLHAWTTSFGFSKMTSSERLTFLDYT 464 QYR+ GMCRIL++ +EKKL ELGVE+L LPA P L W TSFGFSKMT SERLTFLDYT Sbjct: 580 QYRRLGMCRILINEIEKKLVELGVERLTLPAAPSVLDTWVTSFGFSKMTDSERLTFLDYT 639 Query: 463 FLDFQDMTMCQKILRKAPES 404 FLDFQD MCQK+L K P + Sbjct: 640 FLDFQDTVMCQKLLMKIPST 659 >ref|XP_003615709.1| Chromodomain helicase-DNA-binding protein [Medicago truncatula] gi|355517044|gb|AES98667.1| Chromodomain helicase-DNA-binding protein [Medicago truncatula] Length = 1144 Score = 113 bits (283), Expect = 3e-23 Identities = 53/79 (67%), Positives = 62/79 (78%) Frame = -1 Query: 646 FQYRQRGMCRILMDVLEKKLAELGVEKLVLPAVPQTLHAWTTSFGFSKMTSSERLTFLDY 467 FQYR+ GMCR+LMD LEKKL +LGVE+LVLPAVP L WT SFGF +MT+ ER FLDY Sbjct: 1010 FQYRRLGMCRVLMDELEKKLKQLGVERLVLPAVPGVLDTWTNSFGFEQMTNFERSQFLDY 1069 Query: 466 TFLDFQDMTMCQKILRKAP 410 +FLDFQ MCQK+L + P Sbjct: 1070 SFLDFQGTVMCQKLLTRFP 1088