BLASTX nr result

ID: Coptis25_contig00015713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015713
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243...   126   4e-27
emb|CBI15934.3| unnamed protein product [Vitis vinifera]              126   4e-27
ref|XP_002313990.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
emb|CBI15935.3| unnamed protein product [Vitis vinifera]              122   6e-26
ref|XP_003615709.1| Chromodomain helicase-DNA-binding protein [M...   113   3e-23

>ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243375 [Vitis vinifera]
          Length = 1332

 Score =  126 bits (316), Expect = 4e-27
 Identities = 60/79 (75%), Positives = 66/79 (83%)
 Frame = -1

Query: 646  FQYRQRGMCRILMDVLEKKLAELGVEKLVLPAVPQTLHAWTTSFGFSKMTSSERLTFLDY 467
            FQYR+ GMC ILM+ LEKKL ELGVE+LVLPAVP  L+ WTTSFGFSKMT SERL FLDY
Sbjct: 1146 FQYRRLGMCHILMNELEKKLMELGVERLVLPAVPSVLNTWTTSFGFSKMTDSERLRFLDY 1205

Query: 466  TFLDFQDMTMCQKILRKAP 410
            +FLDFQD  MCQK+L K P
Sbjct: 1206 SFLDFQDTVMCQKLLMKIP 1224


>emb|CBI15934.3| unnamed protein product [Vitis vinifera]
          Length = 994

 Score =  126 bits (316), Expect = 4e-27
 Identities = 60/79 (75%), Positives = 66/79 (83%)
 Frame = -1

Query: 646  FQYRQRGMCRILMDVLEKKLAELGVEKLVLPAVPQTLHAWTTSFGFSKMTSSERLTFLDY 467
            FQYR+ GMC ILM+ LEKKL ELGVE+LVLPAVP  L+ WTTSFGFSKMT SERL FLDY
Sbjct: 894  FQYRRLGMCHILMNELEKKLMELGVERLVLPAVPSVLNTWTTSFGFSKMTDSERLRFLDY 953

Query: 466  TFLDFQDMTMCQKILRKAP 410
            +FLDFQD  MCQK+L K P
Sbjct: 954  SFLDFQDTVMCQKLLMKIP 972


>ref|XP_002313990.1| predicted protein [Populus trichocarpa] gi|222850398|gb|EEE87945.1|
            predicted protein [Populus trichocarpa]
          Length = 978

 Score =  125 bits (315), Expect = 5e-27
 Identities = 60/77 (77%), Positives = 66/77 (85%)
 Frame = -1

Query: 646  FQYRQRGMCRILMDVLEKKLAELGVEKLVLPAVPQTLHAWTTSFGFSKMTSSERLTFLDY 467
            FQ+RQ GMCRILMDVLEKKL ELGV++LVLPAVP  L+ WT SFGFSKMT SERL F+DY
Sbjct: 902  FQFRQLGMCRILMDVLEKKLMELGVQRLVLPAVPGVLNTWTGSFGFSKMTDSERLQFVDY 961

Query: 466  TFLDFQDMTMCQKILRK 416
            TFLDFQD  MCQK+L K
Sbjct: 962  TFLDFQDTVMCQKLLMK 978


>emb|CBI15935.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  122 bits (306), Expect = 6e-26
 Identities = 57/80 (71%), Positives = 64/80 (80%)
 Frame = -1

Query: 643 QYRQRGMCRILMDVLEKKLAELGVEKLVLPAVPQTLHAWTTSFGFSKMTSSERLTFLDYT 464
           QYR+ GMCRIL++ +EKKL ELGVE+L LPA P  L  W TSFGFSKMT SERLTFLDYT
Sbjct: 580 QYRRLGMCRILINEIEKKLVELGVERLTLPAAPSVLDTWVTSFGFSKMTDSERLTFLDYT 639

Query: 463 FLDFQDMTMCQKILRKAPES 404
           FLDFQD  MCQK+L K P +
Sbjct: 640 FLDFQDTVMCQKLLMKIPST 659


>ref|XP_003615709.1| Chromodomain helicase-DNA-binding protein [Medicago truncatula]
            gi|355517044|gb|AES98667.1| Chromodomain
            helicase-DNA-binding protein [Medicago truncatula]
          Length = 1144

 Score =  113 bits (283), Expect = 3e-23
 Identities = 53/79 (67%), Positives = 62/79 (78%)
 Frame = -1

Query: 646  FQYRQRGMCRILMDVLEKKLAELGVEKLVLPAVPQTLHAWTTSFGFSKMTSSERLTFLDY 467
            FQYR+ GMCR+LMD LEKKL +LGVE+LVLPAVP  L  WT SFGF +MT+ ER  FLDY
Sbjct: 1010 FQYRRLGMCRVLMDELEKKLKQLGVERLVLPAVPGVLDTWTNSFGFEQMTNFERSQFLDY 1069

Query: 466  TFLDFQDMTMCQKILRKAP 410
            +FLDFQ   MCQK+L + P
Sbjct: 1070 SFLDFQGTVMCQKLLTRFP 1088


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