BLASTX nr result

ID: Coptis25_contig00015712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015712
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517089.1| tso1, putative [Ricinus communis] gi|2235437...   147   7e-34
ref|XP_002311635.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_003537578.1| PREDICTED: uncharacterized protein LOC100815...   129   2e-28
ref|XP_002279154.2| PREDICTED: uncharacterized protein LOC100261...   126   2e-27
emb|CBI26292.3| unnamed protein product [Vitis vinifera]              126   2e-27

>ref|XP_002517089.1| tso1, putative [Ricinus communis] gi|223543724|gb|EEF45252.1| tso1,
            putative [Ricinus communis]
          Length = 727

 Score =  147 bits (372), Expect = 7e-34
 Identities = 80/162 (49%), Positives = 96/162 (59%), Gaps = 27/162 (16%)
 Frame = +3

Query: 3    KSNCLKKYCECYQGGVGCSINCRCEGCKNAYGRKDGSTPE------GEETKASEKNGLLS 164
            KSNCLKKYCECYQGGVGCSINCRCEGCKNA+GRKDGS P        EET+  E NG   
Sbjct: 527  KSNCLKKYCECYQGGVGCSINCRCEGCKNAFGRKDGSAPSETEAEPEEETEGDENNGADK 586

Query: 165  SLQTKDLRKDQDQCPDPDLSLTFSFQICRTSVQHPFSSFIKPVRS--------------- 299
              Q  ++  +++Q P+  L +T    +CR  +Q PFSS  KP RS               
Sbjct: 587  VAQNIEIENNEEQIPNSALPMT-PLPLCRPLLQLPFSSKSKPPRSFLGIGSSSGLYTSQK 645

Query: 300  ------CPPSQPKFEKHFQISPDDETPEILRGNFSPISGIKT 407
                    P Q KFEK  Q  PDD+ PE+LRGN++P +GIKT
Sbjct: 646  YGKPNILRPEQ-KFEKQLQTVPDDDMPEVLRGNYTPSTGIKT 686


>ref|XP_002311635.1| predicted protein [Populus trichocarpa] gi|222851455|gb|EEE89002.1|
            predicted protein [Populus trichocarpa]
          Length = 749

 Score =  135 bits (341), Expect = 3e-30
 Identities = 80/162 (49%), Positives = 97/162 (59%), Gaps = 27/162 (16%)
 Frame = +3

Query: 3    KSNCLKKYCECYQGGVGCSINCRCEGCKNAYGRKDGST-------PEGEETKASEKNGLL 161
            KS+CLKKYCECYQGGVGCS+NCRCEGCKNA+GRKDGS        PE +ET+ASEKNG+ 
Sbjct: 549  KSSCLKKYCECYQGGVGCSLNCRCEGCKNAFGRKDGSALVEMEDEPE-DETEASEKNGVD 607

Query: 162  SSLQTKDLRKDQDQCPDPDLSLTFSFQICRTSVQHPFSSFIKPVR--------------- 296
             ++Q  +++ + +Q P+  L  T   +  R  VQ PFSS  KP R               
Sbjct: 608  KTVQKAEIQNNDEQHPNSALPTT-PLRFSRPLVQLPFSSKGKPPRCFLGVGSSSGLYTGQ 666

Query: 297  -----SCPPSQPKFEKHFQISPDDETPEILRGNFSPISGIKT 407
                 +    Q KFEK FQ    DE PE+LR N SP SGIKT
Sbjct: 667  RYGKPNILRPQWKFEKQFQNVSGDEIPEMLRENHSPSSGIKT 708


>ref|XP_003537578.1| PREDICTED: uncharacterized protein LOC100815907 [Glycine max]
          Length = 774

 Score =  129 bits (324), Expect = 2e-28
 Identities = 74/157 (47%), Positives = 96/157 (61%), Gaps = 22/157 (14%)
 Frame = +3

Query: 3    KSNCLKKYCECYQGGVGCSINCRCEGCKNAYGRKDGSTPEG-----EETKASEKNGLLSS 167
            KS+CLKKYCECYQGGVGCSI+CRCEGCKNA+GRKDGS P G     EET+AS+K  +  +
Sbjct: 578  KSSCLKKYCECYQGGVGCSISCRCEGCKNAFGRKDGSAPVGIETDPEETEASDKGMVEKT 637

Query: 168  LQTKDLRKDQDQCPDPDLSLTFSFQICRTSVQHPFSSFIKPVRSC--------------- 302
            LQ  +++  ++  PD   +++   ++ R  +  PFSS  KP RS                
Sbjct: 638  LQKTEIQNTENH-PD-SATVSTPLRLSRPLLPLPFSSKGKPPRSFVTTISGSALFANQKL 695

Query: 303  --PPSQPKFEKHFQISPDDETPEILRGNFSPISGIKT 407
              P       KHFQ  PD+E P+ILRG+ SPI+ IKT
Sbjct: 696  GKPNPLWSQAKHFQTVPDEEMPDILRGDSSPITCIKT 732


>ref|XP_002279154.2| PREDICTED: uncharacterized protein LOC100261336 [Vitis vinifera]
          Length = 738

 Score =  126 bits (317), Expect = 2e-27
 Identities = 79/163 (48%), Positives = 92/163 (56%), Gaps = 28/163 (17%)
 Frame = +3

Query: 3    KSNCLKKYCECYQGGVGCSINCRCEGCKNAYGRKDGSTPEG------EETKASEKNGLLS 164
            KS+CLKKYCECYQGGVGCSINCRCEGCKNA+GRKDGS   G      EET+  EK+ +  
Sbjct: 536  KSSCLKKYCECYQGGVGCSINCRCEGCKNAFGRKDGSALIGMEAELEEETETLEKSVVDK 595

Query: 165  SLQTKDLRKDQDQCPDPDLSLTFSFQICRTSVQHPFSSFIKPVRSC-------------- 302
            +LQ   ++ D++   D  L +T   + CR   Q  F S  K  RS               
Sbjct: 596  NLQKSIVQNDEEYL-DSALPVT-PLRTCRQPSQLSFPSKTKLPRSSFLTIGSSSGLHTSQ 653

Query: 303  -------PPSQPKFEKHFQISPDDETPEILRGNFSPI-SGIKT 407
                   P  Q KFEK FQ  P+DE PEILRGN SP  S IKT
Sbjct: 654  IFGKPNFPQPQSKFEKKFQTIPEDEMPEILRGNCSPTSSSIKT 696


>emb|CBI26292.3| unnamed protein product [Vitis vinifera]
          Length = 717

 Score =  126 bits (317), Expect = 2e-27
 Identities = 79/163 (48%), Positives = 92/163 (56%), Gaps = 28/163 (17%)
 Frame = +3

Query: 3   KSNCLKKYCECYQGGVGCSINCRCEGCKNAYGRKDGSTPEG------EETKASEKNGLLS 164
           KS+CLKKYCECYQGGVGCSINCRCEGCKNA+GRKDGS   G      EET+  EK+ +  
Sbjct: 515 KSSCLKKYCECYQGGVGCSINCRCEGCKNAFGRKDGSALIGMEAELEEETETLEKSVVDK 574

Query: 165 SLQTKDLRKDQDQCPDPDLSLTFSFQICRTSVQHPFSSFIKPVRSC-------------- 302
           +LQ   ++ D++   D  L +T   + CR   Q  F S  K  RS               
Sbjct: 575 NLQKSIVQNDEEYL-DSALPVT-PLRTCRQPSQLSFPSKTKLPRSSFLTIGSSSGLHTSQ 632

Query: 303 -------PPSQPKFEKHFQISPDDETPEILRGNFSPI-SGIKT 407
                  P  Q KFEK FQ  P+DE PEILRGN SP  S IKT
Sbjct: 633 IFGKPNFPQPQSKFEKKFQTIPEDEMPEILRGNCSPTSSSIKT 675


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