BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015710
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528258.1| conserved hypothetical protein [Ricinus comm...   205   5e-51
ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264...   192   6e-47
emb|CBI37915.3| unnamed protein product [Vitis vinifera]              192   6e-47
ref|XP_002313738.1| predicted protein [Populus trichocarpa] gi|2...   191   1e-46
ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago tr...   180   2e-43

>ref|XP_002528258.1| conserved hypothetical protein [Ricinus communis]
           gi|223532295|gb|EEF34096.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1783

 Score =  205 bits (522), Expect = 5e-51
 Identities = 112/201 (55%), Positives = 137/201 (68%), Gaps = 7/201 (3%)
 Frame = -2

Query: 586 NPKSVDESLYFDSFTDIFKELGNVYLSSSGIPKSLTKKLKSNHVWFLETVSMFKPPNQKS 407
           NPKSVD SL++D FT I  +L N  LSS  +P S+ KKLK NH WF++TVS FKPPN +S
Sbjct: 3   NPKSVDPSLWWDPFTSILTDLENAPLSSQ-LPPSIEKKLKRNHAWFVDTVSRFKPPNAES 61

Query: 406 RSALDSNVVNVGSHKFIIDAELKDIALELSRIADLDEVQSYIIVTR-------FVQHAAD 248
           R AL S  V VGSH+ II  ELKD AL +S    LDEVQSYI+V R        V    +
Sbjct: 62  RQALISKQVKVGSHELIIKPELKDKALHISSYLSLDEVQSYILVERSLESHGLAVDSIVE 121

Query: 247 IKLHLMLLEYHMERQCLLKCTRQIIMHSLYIEDIPQNENVIIEETSKLISDGLDRKLPTV 68
             LH++LLEY++ERQCLLKC RQI++H+LY     + ENVI +E  KLISDGL+RKL ++
Sbjct: 122 EYLHVVLLEYYIERQCLLKCIRQILLHALYFGISSKGENVIRDEAKKLISDGLERKLISI 181

Query: 67  LQDLRFSKHLENMEADLVTLW 5
           LQDL  S   E M+ DL TLW
Sbjct: 182 LQDLLSSSPPEEMDVDLFTLW 202


>ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264071 [Vitis vinifera]
          Length = 1983

 Score =  192 bits (487), Expect = 6e-47
 Identities = 101/201 (50%), Positives = 137/201 (68%), Gaps = 7/201 (3%)
 Frame = -2

Query: 586 NPKSVDESLYFDSFTDIFKELGNVYLSSSGIPKSLTKKLKSNHVWFLETVSMFKPPNQKS 407
           NP SVD  L++DSF+ +  EL +V   SS +P  L KK+K NH WF++  S+FKPPN+KS
Sbjct: 15  NPSSVDGLLWWDSFSLLLTELESVS-PSSDLPPFLVKKVKDNHAWFVDMFSLFKPPNKKS 73

Query: 406 RSALDSNVVNVGSHKFIIDAELKDIALELSRIADLDEVQSYIIVTRFVQH---AADIK-- 242
           R ALDS  V +G+ +  +  ELK+ AL++S    LDEVQSY++V RFV+H   A ++   
Sbjct: 74  REALDSKQVKIGTRQLTVQPELKEAALKVSNSLCLDEVQSYLLVERFVEHNNVAVNLMVQ 133

Query: 241 --LHLMLLEYHMERQCLLKCTRQIIMHSLYIEDIPQNENVIIEETSKLISDGLDRKLPTV 68
             LH++L +Y++ERQCLLKCTRQI MH+LY+    +  N I +E   LISDGL+ KL +V
Sbjct: 134 EFLHVILFQYYIERQCLLKCTRQIFMHALYVGSGSEEGNAIRQEAQSLISDGLESKLLSV 193

Query: 67  LQDLRFSKHLENMEADLVTLW 5
           L DL  S H E+M+ DL TLW
Sbjct: 194 LHDLLSSSHPEHMDIDLFTLW 214


>emb|CBI37915.3| unnamed protein product [Vitis vinifera]
          Length = 1958

 Score =  192 bits (487), Expect = 6e-47
 Identities = 101/201 (50%), Positives = 137/201 (68%), Gaps = 7/201 (3%)
 Frame = -2

Query: 586 NPKSVDESLYFDSFTDIFKELGNVYLSSSGIPKSLTKKLKSNHVWFLETVSMFKPPNQKS 407
           NP SVD  L++DSF+ +  EL +V   SS +P  L KK+K NH WF++  S+FKPPN+KS
Sbjct: 15  NPSSVDGLLWWDSFSLLLTELESVS-PSSDLPPFLVKKVKDNHAWFVDMFSLFKPPNKKS 73

Query: 406 RSALDSNVVNVGSHKFIIDAELKDIALELSRIADLDEVQSYIIVTRFVQH---AADIK-- 242
           R ALDS  V +G+ +  +  ELK+ AL++S    LDEVQSY++V RFV+H   A ++   
Sbjct: 74  REALDSKQVKIGTRQLTVQPELKEAALKVSNSLCLDEVQSYLLVERFVEHNNVAVNLMVQ 133

Query: 241 --LHLMLLEYHMERQCLLKCTRQIIMHSLYIEDIPQNENVIIEETSKLISDGLDRKLPTV 68
             LH++L +Y++ERQCLLKCTRQI MH+LY+    +  N I +E   LISDGL+ KL +V
Sbjct: 134 EFLHVILFQYYIERQCLLKCTRQIFMHALYVGSGSEEGNAIRQEAQSLISDGLESKLLSV 193

Query: 67  LQDLRFSKHLENMEADLVTLW 5
           L DL  S H E+M+ DL TLW
Sbjct: 194 LHDLLSSSHPEHMDIDLFTLW 214


>ref|XP_002313738.1| predicted protein [Populus trichocarpa] gi|222850146|gb|EEE87693.1|
           predicted protein [Populus trichocarpa]
          Length = 740

 Score =  191 bits (485), Expect = 1e-46
 Identities = 106/218 (48%), Positives = 138/218 (63%), Gaps = 24/218 (11%)
 Frame = -2

Query: 586 NPKSVDESLYFDSFTDIFKELGNVYLSSSGIPKSLTKKLKSNHVWFLETVSMFKPPNQKS 407
           NPK+VD SL+FDSFT    +L N  LSS  +P  L KKLK NHVWF+ETVS+FK PN  S
Sbjct: 3   NPKTVDSSLWFDSFTTTLTDLENASLSSD-LPPHLAKKLKENHVWFVETVSLFKKPNANS 61

Query: 406 RSALDSNVVNVGSHKFIIDAELKDIALELSRIADLDEVQSYIIVTR-------FVQHAAD 248
           R AL+S ++ +GSH+  +  ELK  AL +S    LDEVQSYI+V R        V    +
Sbjct: 62  REALNSEIIKIGSHEVTVKPELKVKALHISSYLCLDEVQSYILVERSLECDDLAVDSMVE 121

Query: 247 IKLHLMLLEYHMERQCLLKCTRQIIMHS-----------------LYIEDIPQNENVIIE 119
             LH++LL+Y++ERQCLLKC+R+I+MH+                 +Y+    + ENV  +
Sbjct: 122 DCLHVVLLQYYIERQCLLKCSRRILMHASDLRILTNLILVMPLGVVYVGICSKEENVARD 181

Query: 118 ETSKLISDGLDRKLPTVLQDLRFSKHLENMEADLVTLW 5
           E +KLISDGL+ KL +VLQDL  S H E M+ DL TLW
Sbjct: 182 EAAKLISDGLEHKLISVLQDLLSSSHPEQMDVDLFTLW 219


>ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago truncatula]
           gi|355508330|gb|AES89472.1| Nucleoporin NUP188-like
           protein [Medicago truncatula]
          Length = 1967

 Score =  180 bits (456), Expect = 2e-43
 Identities = 98/198 (49%), Positives = 136/198 (68%), Gaps = 7/198 (3%)
 Frame = -2

Query: 577 SVDESLYFDSFTDIFKELGNVYLSSSGIPKSLTKKLKSNHVWFLETVSMFKPPNQKSRSA 398
           SVD SL++DSFT +F EL +  LSS  +P +L KKLK NH WF++T+S FKPPNQKS+ A
Sbjct: 6   SVDASLWWDSFTLLFTELEDSSLSSD-LPLNLAKKLKDNHAWFVDTLSCFKPPNQKSKDA 64

Query: 397 LDSNVVNVGSHKFIIDAELKDIALELSRIADLDEVQSYIIVTRFVQH---AADIK----L 239
           L+S  V +GSH+  I+ +LKD AL++S    LDEVQSYI+V R+++    A D K    +
Sbjct: 65  LNSKNVKIGSHQMNIEPQLKDKALQISSCLLLDEVQSYILVERYIEDNNAAIDSKAPDFI 124

Query: 238 HLMLLEYHMERQCLLKCTRQIIMHSLYIEDIPQNENVIIEETSKLISDGLDRKLPTVLQD 59
            ++L+EY+ ERQCLLKC R I+M+++YI  + +N N + EE  KL  DGL+ KL + L+ 
Sbjct: 125 QIILIEYYKERQCLLKCIRWILMYAIYIGPVSEN-NSVKEEAKKLFHDGLESKLVSSLEG 183

Query: 58  LRFSKHLENMEADLVTLW 5
           L    + E M+ DL TLW
Sbjct: 184 LLSCSYPEQMDVDLFTLW 201