BLASTX nr result

ID: Coptis25_contig00015695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015695
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633531.1| PREDICTED: putative disease resistance prote...    56   4e-06
ref|XP_002269779.2| PREDICTED: putative disease resistance prote...    55   5e-06
ref|XP_002442761.1| hypothetical protein SORBIDRAFT_08g002390 [S...    55   8e-06
ref|XP_002273714.2| PREDICTED: putative disease resistance RPP13...    55   8e-06
emb|CBI23873.3| unnamed protein product [Vitis vinifera]               55   8e-06

>ref|XP_003633531.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 961

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
 Frame = -2

Query: 309 CLSVKIGEIRDVPQKARHVSVTYDSAPSQATLNTIFKSQSFCRTILFQHCATSSLLELFV 130
           C  ++ G+ + + ++ARH +V +++  S  T   +  + +    IL      S   +  V
Sbjct: 400 CFRLEEGKSQSISERARHAAVLHNTFKSGVTFEALGTTTNLRTVILLHGNERSETPKAIV 459

Query: 129 SR--LSQLEYLRVLDLSNLWTFSSLPPIFGRLKHLRYLNLSNMNI 1
               L  L  LRVLDLS++     +P + GRLKHLRYLNLS+  I
Sbjct: 460 LHDLLPSLRCLRVLDLSHI-AVEEIPDMVGRLKHLRYLNLSSTRI 503


>ref|XP_002269779.2| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 1091

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
 Frame = -2

Query: 309 CLSVKIGEIRDVPQKARHVSVTYDSAPSQATLNTIFKSQSFCRTILFQHCATSSLLELFV 130
           C  ++ G+ + + ++ARH +V +++  S  T   +  + +    IL      S   +  V
Sbjct: 493 CFRLEEGKSQSISERARHAAVLHNTFKSGVTFEALGTTTNLRTVILLHGNERSETPKAIV 552

Query: 129 SR--LSQLEYLRVLDLSNLWTFSSLPPIFGRLKHLRYLNLSNMNI 1
               L  L  LRVLDLS++     +P + GRLKHLRYLNLS+  I
Sbjct: 553 LHDLLPTLRCLRVLDLSHI-AVEEIPDMVGRLKHLRYLNLSSTRI 596


>ref|XP_002442761.1| hypothetical protein SORBIDRAFT_08g002390 [Sorghum bicolor]
           gi|27542753|gb|AAO16686.1| putative Rp1-like protein
           [Sorghum bicolor] gi|241943454|gb|EES16599.1|
           hypothetical protein SORBIDRAFT_08g002390 [Sorghum
           bicolor]
          Length = 1297

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 38/99 (38%), Positives = 52/99 (52%)
 Frame = -2

Query: 312 DCLSVKIGEIRDVPQKARHVSVTYDSAPSQATLNTIFKSQSFCRTILFQHCATSSLLELF 133
           DC  ++   IR+VP   RH+S+  +S      +  I+K Q+  RTI+          ++F
Sbjct: 535 DCFRLEEDNIREVPCTVRHLSLQVESLQKHKQI--IYKLQNL-RTIICIDPLMDDASDIF 591

Query: 132 VSRLSQLEYLRVLDLSNLWTFSSLPPIFGRLKHLRYLNL 16
              L   + LRVL LS  +  S LP   GRLKHLRYLNL
Sbjct: 592 DQMLRNQKKLRVLYLS-FYNSSKLPESIGRLKHLRYLNL 629


>ref|XP_002273714.2| PREDICTED: putative disease resistance RPP13-like protein 1-like
           [Vitis vinifera]
          Length = 1274

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
 Frame = -2

Query: 309 CLSVKIGEIRDVPQKARHVSV---TYDSAPSQATLNTIFKSQSFCRTILFQHCATSSLLE 139
           C+ +K G++ ++P+K RH+S     YD      TL  +    +  RT L  +        
Sbjct: 509 CVQLKDGKMNEIPEKFRHLSYFISEYDLFERFETLTNV----NGLRTFLPLNLGYLPSNR 564

Query: 138 LFVSRLSQLEYLRVLDLSNLWTFSSLPPIFGRLKHLRYLNLSNMNI 1
           +    LS+++YLRVL LS  W    LP   G LKHLRYL+LS  +I
Sbjct: 565 VPNDLLSKIQYLRVLSLSYYWIID-LPDTIGNLKHLRYLDLSYTSI 609


>emb|CBI23873.3| unnamed protein product [Vitis vinifera]
          Length = 908

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
 Frame = -2

Query: 309 CLSVKIGEIRDVPQKARHVSV---TYDSAPSQATLNTIFKSQSFCRTILFQHCATSSLLE 139
           C+ +K G++ ++P+K RH+S     YD      TL  +    +  RT L  +        
Sbjct: 187 CVQLKDGKMNEIPEKFRHLSYFISEYDLFERFETLTNV----NGLRTFLPLNLGYLPSNR 242

Query: 138 LFVSRLSQLEYLRVLDLSNLWTFSSLPPIFGRLKHLRYLNLSNMNI 1
           +    LS+++YLRVL LS  W    LP   G LKHLRYL+LS  +I
Sbjct: 243 VPNDLLSKIQYLRVLSLSYYWIID-LPDTIGNLKHLRYLDLSYTSI 287


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