BLASTX nr result

ID: Coptis25_contig00015693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015693
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30976.3| unnamed protein product [Vitis vinifera]              118   6e-25
ref|XP_002274599.1| PREDICTED: cell division cycle protein 123 h...   118   6e-25
ref|XP_003544043.1| PREDICTED: cell division cycle protein 123 h...   117   8e-25
ref|XP_002310498.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_003605701.1| Cell division cycle protein-like protein [Me...   113   2e-23

>emb|CBI30976.3| unnamed protein product [Vitis vinifera]
          Length = 302

 Score =  118 bits (295), Expect = 6e-25
 Identities = 53/66 (80%), Positives = 60/66 (90%)
 Frame = -1

Query: 286 NRCQIQEWYPKFKSVSIKTLIHEIPETFVHYLRDDSGPFMLPQSISGEDALPRRIYNPEE 107
           NRCQIQ+WYPKFKSVSIKTLIHE+PE+FV YL DD GPF+LP SI+ EDALP RI+NPEE
Sbjct: 7   NRCQIQDWYPKFKSVSIKTLIHELPESFVDYLLDDHGPFLLPVSITNEDALPNRIHNPEE 66

Query: 106 EEDFQV 89
           EED+QV
Sbjct: 67  EEDYQV 72


>ref|XP_002274599.1| PREDICTED: cell division cycle protein 123 homolog [Vitis vinifera]
          Length = 338

 Score =  118 bits (295), Expect = 6e-25
 Identities = 53/66 (80%), Positives = 60/66 (90%)
 Frame = -1

Query: 286 NRCQIQEWYPKFKSVSIKTLIHEIPETFVHYLRDDSGPFMLPQSISGEDALPRRIYNPEE 107
           NRCQIQ+WYPKFKSVSIKTLIHE+PE+FV YL DD GPF+LP SI+ EDALP RI+NPEE
Sbjct: 7   NRCQIQDWYPKFKSVSIKTLIHELPESFVDYLLDDHGPFLLPVSITNEDALPNRIHNPEE 66

Query: 106 EEDFQV 89
           EED+QV
Sbjct: 67  EEDYQV 72


>ref|XP_003544043.1| PREDICTED: cell division cycle protein 123 homolog [Glycine max]
          Length = 332

 Score =  117 bits (294), Expect = 8e-25
 Identities = 51/66 (77%), Positives = 59/66 (89%)
 Frame = -1

Query: 286 NRCQIQEWYPKFKSVSIKTLIHEIPETFVHYLRDDSGPFMLPQSISGEDALPRRIYNPEE 107
           NRCQIQEWYPKFKSVS KTLIH++PE+F+ YL DDSGPF+LP S+  EDALP RI+NP+E
Sbjct: 7   NRCQIQEWYPKFKSVSFKTLIHQLPESFIQYLLDDSGPFLLPDSVLNEDALPNRIHNPDE 66

Query: 106 EEDFQV 89
           EEDFQV
Sbjct: 67  EEDFQV 72


>ref|XP_002310498.1| predicted protein [Populus trichocarpa] gi|222853401|gb|EEE90948.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  116 bits (290), Expect = 2e-24
 Identities = 52/66 (78%), Positives = 60/66 (90%)
 Frame = -1

Query: 286 NRCQIQEWYPKFKSVSIKTLIHEIPETFVHYLRDDSGPFMLPQSISGEDALPRRIYNPEE 107
           NRCQIQEWYPKFK VSI+T+IHE+PE+FV YL DDSGPF+LP SISGEDALP RI+NP +
Sbjct: 7   NRCQIQEWYPKFKPVSIRTVIHELPESFVEYLVDDSGPFLLPLSISGEDALPNRIHNPID 66

Query: 106 EEDFQV 89
           EED+QV
Sbjct: 67  EEDYQV 72


>ref|XP_003605701.1| Cell division cycle protein-like protein [Medicago truncatula]
           gi|355506756|gb|AES87898.1| Cell division cycle
           protein-like protein [Medicago truncatula]
          Length = 338

 Score =  113 bits (282), Expect = 2e-23
 Identities = 50/66 (75%), Positives = 58/66 (87%)
 Frame = -1

Query: 286 NRCQIQEWYPKFKSVSIKTLIHEIPETFVHYLRDDSGPFMLPQSISGEDALPRRIYNPEE 107
           NRCQIQEWYP FKSVSIKTLIH++PE+F+ YL DDSGPF+LP S+  EDALP RI+NP +
Sbjct: 10  NRCQIQEWYPIFKSVSIKTLIHQLPESFIQYLLDDSGPFLLPVSVLNEDALPNRIHNPTD 69

Query: 106 EEDFQV 89
           EEDFQV
Sbjct: 70  EEDFQV 75


Top