BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015681
         (1770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282252.1| PREDICTED: glutamate-rich WD repeat-containi...   429   e-117
ref|XP_003524897.1| PREDICTED: glutamate-rich WD repeat-containi...   421   e-115
ref|XP_003531198.1| PREDICTED: LOW QUALITY PROTEIN: glutamate-ri...   412   e-112
ref|XP_002527727.1| WD-repeat protein, putative [Ricinus communi...   411   e-112
ref|XP_002306305.1| predicted protein [Populus trichocarpa] gi|2...   408   e-111

>ref|XP_002282252.1| PREDICTED: glutamate-rich WD repeat-containing protein 1 [Vitis
            vinifera] gi|297738673|emb|CBI27918.3| unnamed protein
            product [Vitis vinifera]
          Length = 474

 Score =  429 bits (1103), Expect = e-117
 Identities = 195/292 (66%), Positives = 226/292 (77%)
 Frame = +1

Query: 517  MPAKVWQPGVDKIEEGEELQCDPSAYNSLHAFHIGWPCLSFDIVRDQLGLIRTEFPHTLY 696
            +P KVWQPGVDK+EEGEELQCDPSAYNSLHAFH+GWPCLSFDIVRD LGL+R+EFPHT Y
Sbjct: 30   LPTKVWQPGVDKLEEGEELQCDPSAYNSLHAFHVGWPCLSFDIVRDSLGLVRSEFPHTAY 89

Query: 697  CVAGTQAENPSWNYIGMYKLSKISGKRRDLVPNKAXXXXXXXXXXXXXXXXXXXXXXXXX 876
             VAGTQAE  SWN IG++KLS ISGK+R+LVP                            
Sbjct: 90   FVAGTQAEKASWNSIGIFKLSNISGKKRELVPTTKSTGDDSDMDGDGSDSDEDSENEEDG 149

Query: 877  XAQPPVLQLRKVVHQGGVNRIRSMAQNPHICASWADTGHVQVWDFSSHLNALAETEAEVS 1056
             +  P+LQ+RKV H+G VNRIR+M QNPHICASWADTGHVQVWDFSSHLNALAE+E + +
Sbjct: 150  GSGTPILQMRKVAHEGCVNRIRAMTQNPHICASWADTGHVQVWDFSSHLNALAESETDAN 209

Query: 1057 TGDSSSFSMDPLMKFSGHKDEGFALDWSPLVPGRLVSGDCKKAIHLWEPLSSGTWKVDST 1236
             G + + +  PL+KF GHKDEG+A+DWSP+VPG+LV+GDCK  I+LWEP S  TWKVD+ 
Sbjct: 210  QGSTPAINQAPLVKFGGHKDEGYAIDWSPVVPGKLVTGDCKNCIYLWEPTSDATWKVDTN 269

Query: 1237 PFVGHAGSVEDLQWSPTEADVFASCSVDGTFAIWDTRLGKTPAVSIKAHKAD 1392
            PF+GH  SVEDLQWSPTE  VFASCSVDG  AIWDTRLG++PA S KAH AD
Sbjct: 270  PFIGHTASVEDLQWSPTEVHVFASCSVDGNIAIWDTRLGRSPAASFKAHNAD 321


>ref|XP_003524897.1| PREDICTED: glutamate-rich WD repeat-containing protein 1-like
            [Glycine max]
          Length = 475

 Score =  421 bits (1082), Expect = e-115
 Identities = 201/292 (68%), Positives = 224/292 (76%)
 Frame = +1

Query: 517  MPAKVWQPGVDKIEEGEELQCDPSAYNSLHAFHIGWPCLSFDIVRDQLGLIRTEFPHTLY 696
            +PAKVWQPGVDK+EEGEELQCDPSAYNSLHAFHIGWPCLSFDI+RD LGL+R EFPHT+Y
Sbjct: 32   IPAKVWQPGVDKLEEGEELQCDPSAYNSLHAFHIGWPCLSFDILRDSLGLVRKEFPHTVY 91

Query: 697  CVAGTQAENPSWNYIGMYKLSKISGKRRDLVPNKAXXXXXXXXXXXXXXXXXXXXXXXXX 876
             +AGTQAE PSWN IG++K+S I+GKRR+ VP                            
Sbjct: 92   FMAGTQAEKPSWNSIGIFKVSNITGKRREPVPKLGTDDTEMDGEDSDSDDDSEDEEGG-- 149

Query: 877  XAQPPVLQLRKVVHQGGVNRIRSMAQNPHICASWADTGHVQVWDFSSHLNALAETEAEVS 1056
             AQ P LQLRKV HQG VNRIRSM QNPHICA+WADTGHVQVWD +SHLNALAE+E E  
Sbjct: 150  -AQGPSLQLRKVAHQGCVNRIRSMPQNPHICAAWADTGHVQVWDLNSHLNALAESETEGV 208

Query: 1057 TGDSSSFSMDPLMKFSGHKDEGFALDWSPLVPGRLVSGDCKKAIHLWEPLSSGTWKVDST 1236
             G ++ F+ DPL KF  HKDEG+A+DWSPLVPGRL SGDC   I+LWEP S+GTW VD+ 
Sbjct: 209  QGVAAVFNQDPLYKFK-HKDEGYAIDWSPLVPGRLASGDCNNCIYLWEPTSAGTWNVDNA 267

Query: 1237 PFVGHAGSVEDLQWSPTEADVFASCSVDGTFAIWDTRLGKTPAVSIKAHKAD 1392
            PF GH  SVEDLQWSPTE DVFASCSVDG  AIWDTRLGK+PA S KAH AD
Sbjct: 268  PFTGHTASVEDLQWSPTEPDVFASCSVDGNIAIWDTRLGKSPAASFKAHNAD 319


>ref|XP_003531198.1| PREDICTED: LOW QUALITY PROTEIN: glutamate-rich WD repeat-containing
            protein 1-like [Glycine max]
          Length = 472

 Score =  412 bits (1059), Expect = e-112
 Identities = 197/293 (67%), Positives = 222/293 (75%), Gaps = 1/293 (0%)
 Frame = +1

Query: 517  MPAKVWQPGVDKIEEGEELQCDPSAYNSLHAFHIGWPCLSFDIVRDQLGLIRTEFPHTLY 696
            +PAKVWQPGVDK+EEGEELQCDPSAYNSLHAFHIGWPCLSFDI+RD LGL+RTEFPHT+Y
Sbjct: 27   IPAKVWQPGVDKLEEGEELQCDPSAYNSLHAFHIGWPCLSFDILRDSLGLVRTEFPHTVY 86

Query: 697  CVAGTQAENPSWNYIGMYKLSKISGKRRDLVPNKAXXXXXXXXXXXXXXXXXXXXXXXXX 876
             +AGTQAE PSWN IG++K+S I+GKRR+ VP                            
Sbjct: 87   FMAGTQAEKPSWNSIGIFKVSNITGKRREPVPKLGTDDTEMDGEDSDSDDDSEEEDEGVL 146

Query: 877  XAQP-PVLQLRKVVHQGGVNRIRSMAQNPHICASWADTGHVQVWDFSSHLNALAETEAEV 1053
                   LQLRKV HQG VNRIRSM QNPHICA+WADTGHVQVWD +SHLN LAETE E 
Sbjct: 147  TFXFFSHLQLRKVAHQGCVNRIRSMPQNPHICAAWADTGHVQVWDLNSHLNVLAETETEG 206

Query: 1054 STGDSSSFSMDPLMKFSGHKDEGFALDWSPLVPGRLVSGDCKKAIHLWEPLSSGTWKVDS 1233
              G ++ F+ DPL KF  HKDEG+A+DWSPLVPG+L SGDC   I+LWEP S+GTW VD+
Sbjct: 207  VQGVAAVFNQDPLYKFK-HKDEGYAIDWSPLVPGKLASGDCNNCIYLWEPTSAGTWNVDN 265

Query: 1234 TPFVGHAGSVEDLQWSPTEADVFASCSVDGTFAIWDTRLGKTPAVSIKAHKAD 1392
             PF+GH  SVEDLQWSPTE+ VFASCSVDG  AIWDTRLGK+PA S KAH AD
Sbjct: 266  APFIGHTASVEDLQWSPTESHVFASCSVDGNIAIWDTRLGKSPAASFKAHNAD 318


>ref|XP_002527727.1| WD-repeat protein, putative [Ricinus communis]
            gi|223532868|gb|EEF34640.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 476

 Score =  411 bits (1056), Expect = e-112
 Identities = 199/292 (68%), Positives = 225/292 (77%)
 Frame = +1

Query: 517  MPAKVWQPGVDKIEEGEELQCDPSAYNSLHAFHIGWPCLSFDIVRDQLGLIRTEFPHTLY 696
            MP KVWQPGVDK+EEGEEL+CDPSAYNSLH FHIGWPCLSFDIV D+LGL+RTEFPHT+Y
Sbjct: 31   MPTKVWQPGVDKLEEGEELECDPSAYNSLHGFHIGWPCLSFDIVHDKLGLLRTEFPHTVY 90

Query: 697  CVAGTQAENPSWNYIGMYKLSKISGKRRDLVPNKAXXXXXXXXXXXXXXXXXXXXXXXXX 876
             VAGTQA+  S N IG++K+S ISGKRR+LVP K                          
Sbjct: 91   FVAGTQADKASSNTIGIFKVSNISGKRRELVPAKT-TDGDAEIDTDSSDSDEDSEDEEHG 149

Query: 877  XAQPPVLQLRKVVHQGGVNRIRSMAQNPHICASWADTGHVQVWDFSSHLNALAETEAEVS 1056
             ++ PVLQ+R V HQG VNRIR+MAQNPHICASWADTGHVQ+WDFSSHLNAL+E+EA+  
Sbjct: 150  GSRAPVLQIRNVAHQGCVNRIRAMAQNPHICASWADTGHVQIWDFSSHLNALSESEAD-R 208

Query: 1057 TGDSSSFSMDPLMKFSGHKDEGFALDWSPLVPGRLVSGDCKKAIHLWEPLSSGTWKVDST 1236
             G  S+ +  PL+KF GHKDEG+A+DWSP V GRLVSGDCK  IHLWEP S  TW V S 
Sbjct: 209  QGGPSAVNQAPLVKFGGHKDEGYAIDWSPRVTGRLVSGDCKNCIHLWEP-SGATWNVGSV 267

Query: 1237 PFVGHAGSVEDLQWSPTEADVFASCSVDGTFAIWDTRLGKTPAVSIKAHKAD 1392
            PFVGHA SVEDLQWSPTE  VFASCSVDG+ AIWD RLG+TPA+S KAH AD
Sbjct: 268  PFVGHAASVEDLQWSPTEDAVFASCSVDGSIAIWDIRLGRTPAISFKAHNAD 319


>ref|XP_002306305.1| predicted protein [Populus trichocarpa] gi|222855754|gb|EEE93301.1|
            predicted protein [Populus trichocarpa]
          Length = 443

 Score =  408 bits (1048), Expect = e-111
 Identities = 190/292 (65%), Positives = 219/292 (75%)
 Frame = +1

Query: 517  MPAKVWQPGVDKIEEGEELQCDPSAYNSLHAFHIGWPCLSFDIVRDQLGLIRTEFPHTLY 696
            MP KVWQPGVDK+ E EEL+CDP+AYNSLHAFHIGWPCLSFD+VRD LGL+RT+FPHT+Y
Sbjct: 1    MPTKVWQPGVDKLGEEEELECDPTAYNSLHAFHIGWPCLSFDVVRDSLGLLRTDFPHTVY 60

Query: 697  CVAGTQAENPSWNYIGMYKLSKISGKRRDLVPNKAXXXXXXXXXXXXXXXXXXXXXXXXX 876
             VAGTQAE P WN IG++K+S +SGK+R+LVP+K                          
Sbjct: 61   FVAGTQAEKPDWNSIGIFKVSNVSGKQRELVPSKTTAGDSDMDTDNSDSDEDSEDEEEGG 120

Query: 877  XAQPPVLQLRKVVHQGGVNRIRSMAQNPHICASWADTGHVQVWDFSSHLNALAETEAEVS 1056
             A P VLQLRKV H+G +NRIR+M QNPHICASW+D G+VQ+WDFS+HLNALAE+E EV 
Sbjct: 121  SATP-VLQLRKVAHRGCINRIRAMTQNPHICASWSDAGYVQIWDFSTHLNALAESETEVP 179

Query: 1057 TGDSSSFSMDPLMKFSGHKDEGFALDWSPLVPGRLVSGDCKKAIHLWEPLSSGTWKVDST 1236
             G SS F+  PL  F GHKDEG+A+DWSP V GRLV+GDCK  IHLWE  S  TW VD+T
Sbjct: 180  RGASSVFNQAPLFNFKGHKDEGYAIDWSPRVAGRLVTGDCKNCIHLWESTSGATWNVDAT 239

Query: 1237 PFVGHAGSVEDLQWSPTEADVFASCSVDGTFAIWDTRLGKTPAVSIKAHKAD 1392
            PF GH  SVEDLQWS TE  VFASCSVDG  AIWD RLGK+PA+  KAH AD
Sbjct: 240  PFTGHTASVEDLQWSSTEDHVFASCSVDGHIAIWDARLGKSPAIYFKAHNAD 291