BLASTX nr result

ID: Coptis25_contig00015674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015674
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                186   2e-45
gb|ABJ96383.1| hypothetical protein [Prunus persica]                  163   2e-38
emb|CAN67073.1| hypothetical protein VITISV_011746 [Vitis vinifera]   160   1e-37
gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha...   157   1e-36
ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group] g...   155   3e-36

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  186 bits (472), Expect = 2e-45
 Identities = 89/133 (66%), Positives = 110/133 (82%)
 Frame = +1

Query: 4    VCQFMHNPRSPHLSAVKRILRYLKGTITHGLLFTKGSLHLNAFTYADWAGCPVDRRSITG 183
            VCQ+MH+P++ HL AVKRILRYLKGT+  GL FTKGS  L A++ ADWAGCPVDRRS +G
Sbjct: 1458 VCQYMHSPQTIHLQAVKRILRYLKGTVDLGLWFTKGSQCLTAWSDADWAGCPVDRRSTSG 1517

Query: 184  FVMFLGSNPISWSAKKQHTVARSSTEAEYRALAHTAAEIYWLCKLFKDLHISLPRSPLLH 363
            + +FLGSN ISWSAKKQ TVARSSTEAEYR+LA+TAAEI W+CK+  D+   L ++P+++
Sbjct: 1518 YCVFLGSNLISWSAKKQATVARSSTEAEYRSLANTAAEITWVCKILHDISFPLLKTPVIY 1577

Query: 364  CDNISAISLAHNP 402
            CDN S I+LA NP
Sbjct: 1578 CDNKSVIALAFNP 1590


>gb|ABJ96383.1| hypothetical protein [Prunus persica]
          Length = 193

 Score =  163 bits (412), Expect = 2e-38
 Identities = 81/130 (62%), Positives = 97/130 (74%), Gaps = 1/130 (0%)
 Frame = +1

Query: 16  MHNPRSPHLSAVKRILRYLKGTITHGLLFTKGSLH-LNAFTYADWAGCPVDRRSITGFVM 192
           MHNP S H ++VKRILRYLK TI+HGL  +K S H + AF  ADWAGCP DRRS  GF +
Sbjct: 1   MHNPTSEHWASVKRILRYLKKTISHGLFLSKSSSHAIQAFCDADWAGCPDDRRSTGGFAI 60

Query: 193 FLGSNPISWSAKKQHTVARSSTEAEYRALAHTAAEIYWLCKLFKDLHISLPRSPLLHCDN 372
           +LG N +SWSAKKQHTVARSSTEAEYRA+A+T+ EI WL  L ++L  S   SP+L CDN
Sbjct: 61  YLGCNLVSWSAKKQHTVARSSTEAEYRAIANTSTEITWLRSLLQELGFSTSTSPVLWCDN 120

Query: 373 ISAISLAHNP 402
           + A  L+ NP
Sbjct: 121 LGATYLSANP 130


>emb|CAN67073.1| hypothetical protein VITISV_011746 [Vitis vinifera]
          Length = 879

 Score =  160 bits (405), Expect = 1e-37
 Identities = 80/133 (60%), Positives = 95/133 (71%)
 Frame = +1

Query: 4    VCQFMHNPRSPHLSAVKRILRYLKGTITHGLLFTKGSLHLNAFTYADWAGCPVDRRSITG 183
            +CQ MH P S H +  KR+L YLKGTI  GL +TKG   L AF  +DWAG P DRRS TG
Sbjct: 720  LCQHMHCPNSVHWTTAKRVLCYLKGTIDLGLWYTKGEQTLQAFCDSDWAGNPDDRRSTTG 779

Query: 184  FVMFLGSNPISWSAKKQHTVARSSTEAEYRALAHTAAEIYWLCKLFKDLHISLPRSPLLH 363
            + +F GS  ISW+AKKQ  VARSSTEAEYRAL  T AE+YW+  L K+LHISLP +P + 
Sbjct: 780  YGVFFGSCLISWTAKKQSVVARSSTEAEYRALTITTAELYWIRMLLKELHISLPTAPTIW 839

Query: 364  CDNISAISLAHNP 402
            CDN  A++LA NP
Sbjct: 840  CDNSGALALASNP 852


>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
            gi|225898008|dbj|BAH30336.1| hypothetical protein
            [Arabidopsis thaliana]
          Length = 1459

 Score =  157 bits (396), Expect = 1e-36
 Identities = 80/156 (51%), Positives = 102/156 (65%), Gaps = 1/156 (0%)
 Frame = +1

Query: 10   QFMHNPRSPHLSAVKRILRYLKGTITHGLLFTKGS-LHLNAFTYADWAGCPVDRRSITGF 186
            QFMH P S H  A KR+LRYL GT THG+     S +HL+AF+ ADWAG   D  S   +
Sbjct: 1264 QFMHQPTSDHWQAAKRVLRYLAGTTTHGIFLNSSSPIHLHAFSDADWAGDSADYVSTNAY 1323

Query: 187  VMFLGSNPISWSAKKQHTVARSSTEAEYRALAHTAAEIYWLCKLFKDLHISLPRSPLLHC 366
            V++LG NPISWS+KKQ  V+RSSTE+EYRA+A+ A+EI WLC L  +LHI LP  P + C
Sbjct: 1324 VIYLGRNPISWSSKKQRGVSRSSTESEYRAVANAASEIRWLCSLLTELHIRLPHGPTIFC 1383

Query: 367  DNISAISLAHNPCEIPISSSQNMALPFFFDLSSIMS 474
            DNI A  +  NP  +  S  +++AL + F    I S
Sbjct: 1384 DNIGATYICANP--VFHSRMKHIALDYHFVRGMIQS 1417


>ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group]
            gi|255676152|dbj|BAH93014.1| Os05g0235100, partial [Oryza
            sativa Japonica Group]
          Length = 841

 Score =  155 bits (393), Expect = 3e-36
 Identities = 75/134 (55%), Positives = 99/134 (73%), Gaps = 1/134 (0%)
 Frame = +1

Query: 4    VCQFMHNPRSPHLSAVKRILRYLKGTITHGL-LFTKGSLHLNAFTYADWAGCPVDRRSIT 180
            VC FMH+PR PHL+ +KRILRY+KGT+  GL L T     L A++ ADWAGCP   RS +
Sbjct: 639  VCLFMHDPREPHLALIKRILRYIKGTLHIGLHLGTTPVDSLTAYSDADWAGCPDSHRSTS 698

Query: 181  GFVMFLGSNPISWSAKKQHTVARSSTEAEYRALAHTAAEIYWLCKLFKDLHISLPRSPLL 360
            G+ +FLG N +SWS+K+Q TV+RSS EAEYRA+AH  AE  WL +L  +LHISL  + ++
Sbjct: 699  GYCVFLGDNLVSWSSKRQTTVSRSSAEAEYRAVAHAIAECCWLRQLLSELHISLTSATVV 758

Query: 361  HCDNISAISLAHNP 402
            +CDN+SA+ +A NP
Sbjct: 759  YCDNVSAVYMAANP 772


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