BLASTX nr result

ID: Coptis25_contig00015669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015669
         (1551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25555.3| unnamed protein product [Vitis vinifera]              352   2e-94
ref|XP_002263317.1| PREDICTED: protein SRG1 [Vitis vinifera]          352   2e-94
ref|XP_002331015.1| predicted protein [Populus trichocarpa] gi|2...   350   6e-94
ref|XP_002263617.1| PREDICTED: protein SRG1 [Vitis vinifera] gi|...   349   1e-93
emb|CAN68790.1| hypothetical protein VITISV_001365 [Vitis vinifera]   342   2e-91

>emb|CBI25555.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score =  352 bits (903), Expect = 2e-94
 Identities = 180/355 (50%), Positives = 244/355 (68%), Gaps = 1/355 (0%)
 Frame = +1

Query: 187  LEKQVQELSINGDEPPPRFIRRDKDAVPINTSLS-SSIPIIDLHVLXXXXXXXEEKDNEM 363
            L   VQ+L ING++ P  +I R+ D  PI  S   + IPIIDL +L       E    E+
Sbjct: 13   LSNPVQQLVINGEQVPENYIHRNTDDGPICASFPVTEIPIIDLGLLTSSSPTGEP---EL 69

Query: 364  EKLKLALSTWGFFQAIGHNIPSSLLDEMQRKANDFFDLPMEEKKKYSINYDGKQDYLQGY 543
            EKL+ ALS+WG FQAI H + SS LD+++    +FF LPMEEK+KYS   +     ++GY
Sbjct: 70   EKLRSALSSWGCFQAINHGMASSFLDKVRAVTKEFFALPMEEKQKYSRTLED----IEGY 125

Query: 544  GNDLVVSEDQLIDWSDRLYLLIKPLDQREYKHWPDNPNGFRKIINEYSMKTHLVAEIVLK 723
            GND VV+E Q +DW+DRLYLL++P DQR+ K WP+NP+ FR  +NEY+ K   + EIVLK
Sbjct: 126  GNDTVVTEHQTLDWTDRLYLLVRPEDQRKLKLWPENPDTFRDTLNEYTEKLGQLTEIVLK 185

Query: 724  YMAKSLGLEENYFHSAVQENAPTFLRFNYYPPCSRPDLVYGVKPHADGGAITILLQDKEV 903
             MAKSL L+++ F    +E A  + RFN YP C RPD++ G+KPHADG  IT LLQDKEV
Sbjct: 186  AMAKSLSLDDSCFLDHCREGALMYTRFNLYPVCPRPDVILGLKPHADGSTITFLLQDKEV 245

Query: 904  EGLQILKDGNWIKVPIVPHALLVNVADQVEIMSNGVFRSVVHRVITNTEKPRFSLAMFYV 1083
            EGLQ+LKD  W+ VPI+P ALL+N+ DQ E+ SNG+F+S+VHRV+TN+E+ R S+A F +
Sbjct: 246  EGLQVLKDDQWVGVPIIPQALLINLGDQSELASNGIFKSLVHRVVTNSERERISVATFLL 305

Query: 1084 PEKEIDIEPAKDLITESKPRLFKKMKSEEYGELYFQSSSRGMRGIDNARV*FPIL 1248
            P  +++IEPA  L+ E +PRL+KK+K+  Y  LYF +  RG R I +++  F  L
Sbjct: 306  PHPDMEIEPANGLVNEQRPRLYKKVKN--YVSLYFHNYQRGKRPIVHSKFKFIFL 358


>ref|XP_002263317.1| PREDICTED: protein SRG1 [Vitis vinifera]
          Length = 377

 Score =  352 bits (903), Expect = 2e-94
 Identities = 180/355 (50%), Positives = 244/355 (68%), Gaps = 1/355 (0%)
 Frame = +1

Query: 187  LEKQVQELSINGDEPPPRFIRRDKDAVPINTSLS-SSIPIIDLHVLXXXXXXXEEKDNEM 363
            L   VQ+L ING++ P  +I R+ D  PI  S   + IPIIDL +L       E    E+
Sbjct: 13   LSNPVQQLVINGEQVPENYIHRNTDDGPICASFPVTEIPIIDLGLLTSSSPTGEP---EL 69

Query: 364  EKLKLALSTWGFFQAIGHNIPSSLLDEMQRKANDFFDLPMEEKKKYSINYDGKQDYLQGY 543
            EKL+ ALS+WG FQAI H + SS LD+++    +FF LPMEEK+KYS   +     ++GY
Sbjct: 70   EKLRSALSSWGCFQAINHGMASSFLDKVRAVTKEFFALPMEEKQKYSRTLED----IEGY 125

Query: 544  GNDLVVSEDQLIDWSDRLYLLIKPLDQREYKHWPDNPNGFRKIINEYSMKTHLVAEIVLK 723
            GND VV+E Q +DW+DRLYLL++P DQR+ K WP+NP+ FR  +NEY+ K   + EIVLK
Sbjct: 126  GNDTVVTEHQTLDWTDRLYLLVRPEDQRKLKLWPENPDTFRDTLNEYTEKLGQLTEIVLK 185

Query: 724  YMAKSLGLEENYFHSAVQENAPTFLRFNYYPPCSRPDLVYGVKPHADGGAITILLQDKEV 903
             MAKSL L+++ F    +E A  + RFN YP C RPD++ G+KPHADG  IT LLQDKEV
Sbjct: 186  AMAKSLSLDDSCFLDHCREGALMYTRFNLYPVCPRPDVILGLKPHADGSTITFLLQDKEV 245

Query: 904  EGLQILKDGNWIKVPIVPHALLVNVADQVEIMSNGVFRSVVHRVITNTEKPRFSLAMFYV 1083
            EGLQ+LKD  W+ VPI+P ALL+N+ DQ E+ SNG+F+S+VHRV+TN+E+ R S+A F +
Sbjct: 246  EGLQVLKDDQWVGVPIIPQALLINLGDQSELASNGIFKSLVHRVVTNSERERISVATFLL 305

Query: 1084 PEKEIDIEPAKDLITESKPRLFKKMKSEEYGELYFQSSSRGMRGIDNARV*FPIL 1248
            P  +++IEPA  L+ E +PRL+KK+K+  Y  LYF +  RG R I +++  F  L
Sbjct: 306  PHPDMEIEPANGLVNEQRPRLYKKVKN--YVSLYFHNYQRGKRPIVHSKFKFIFL 358


>ref|XP_002331015.1| predicted protein [Populus trichocarpa] gi|222872945|gb|EEF10076.1|
            predicted protein [Populus trichocarpa]
          Length = 347

 Score =  350 bits (898), Expect = 6e-94
 Identities = 173/354 (48%), Positives = 243/354 (68%), Gaps = 1/354 (0%)
 Frame = +1

Query: 175  EVLVLEKQVQELSINGDEPPPRFIRRDKDAVPINTSLSS-SIPIIDLHVLXXXXXXXEEK 351
            + +++   VQE+++NG+EPP ++  +  D   ++ S+    IP++DL +L       +E 
Sbjct: 4    KTVLISNSVQEMALNGEEPPVKYFCKGNDVGVLDASVPLIDIPVVDLGLLTSPSTSAQE- 62

Query: 352  DNEMEKLKLALSTWGFFQAIGHNIPSSLLDEMQRKANDFFDLPMEEKKKYSINYDGKQDY 531
               +EK  LA S+WG FQ + H + SS LD+++  +  FF L ME+K+KYS     + D 
Sbjct: 63   ---LEKFHLAASSWGCFQVVNHGMTSSFLDKIRDVSKRFFALSMEDKQKYS----READS 115

Query: 532  LQGYGNDLVVSEDQLIDWSDRLYLLIKPLDQREYKHWPDNPNGFRKIINEYSMKTHLVAE 711
            ++GYGND+++S+ Q IDWSDRLYL I P DQR+ K WP+NP  FR+ +NEY+MK   + E
Sbjct: 116  IEGYGNDMILSDHQTIDWSDRLYLTISPEDQRKIKFWPENPKDFRETLNEYTMKLQEINE 175

Query: 712  IVLKYMAKSLGLEENYFHSAVQENAPTFLRFNYYPPCSRPDLVYGVKPHADGGAITILLQ 891
            I+L+ MA SL LEE+ F     E      RFN+YPPC RPD + GVKPHAD  AIT LLQ
Sbjct: 176  ILLRAMAMSLNLEESSFLDQYGERPLVAARFNFYPPCPRPDRILGVKPHADASAITFLLQ 235

Query: 892  DKEVEGLQILKDGNWIKVPIVPHALLVNVADQVEIMSNGVFRSVVHRVITNTEKPRFSLA 1071
            DKEVEGLQ LKD  W +VPI+PHALL+NV DQVEIMSNG+F+S VHRV+TNTEK R +LA
Sbjct: 236  DKEVEGLQFLKDNQWFRVPIIPHALLINVGDQVEIMSNGIFKSPVHRVVTNTEKERNTLA 295

Query: 1072 MFYVPEKEIDIEPAKDLITESKPRLFKKMKSEEYGELYFQSSSRGMRGIDNARV 1233
            +F +P+ + +I+PA  LI+E++P L+KK+K  +Y  +YFQ   +G R I+  ++
Sbjct: 296  VFCIPDSDKEIKPADGLISETRPSLYKKVK--DYVSIYFQYYQQGKRPIEAVKI 347


>ref|XP_002263617.1| PREDICTED: protein SRG1 [Vitis vinifera] gi|147790901|emb|CAN77231.1|
            hypothetical protein VITISV_002774 [Vitis vinifera]
            gi|296084536|emb|CBI25557.3| unnamed protein product
            [Vitis vinifera]
          Length = 356

 Score =  349 bits (895), Expect = 1e-93
 Identities = 165/350 (47%), Positives = 246/350 (70%), Gaps = 1/350 (0%)
 Frame = +1

Query: 187  LEKQVQELSINGDEPPPRFIRRDKDAVPINTSLSSS-IPIIDLHVLXXXXXXXEEKDNEM 363
            L + VQE+S+NG+EPPP++  ++    P+++ L S  IPIID+ +L       +  + E+
Sbjct: 13   LAQSVQEMSVNGNEPPPQYFLKENSIQPMDSYLPSDPIPIIDISLLSSSSLSSKGGEEEL 72

Query: 364  EKLKLALSTWGFFQAIGHNIPSSLLDEMQRKANDFFDLPMEEKKKYSINYDGKQDYLQGY 543
            +K K  L++WG FQA+GH + SS LD+++     FF LP+EEK+KYS   DG    ++GY
Sbjct: 73   QKFKSTLTSWGCFQAVGHGLSSSFLDKVREVGKQFFALPVEEKEKYSRATDG----IEGY 128

Query: 544  GNDLVVSEDQLIDWSDRLYLLIKPLDQREYKHWPDNPNGFRKIINEYSMKTHLVAEIVLK 723
            GND ++SE+Q++DWS RL+L ++P+DQR+ + WP+NP  FR++++EY  K  ++ +++ K
Sbjct: 129  GNDPILSENQVLDWSYRLFLRLQPVDQRKLRLWPENPTEFREVLDEYGTKVKIIMDVLFK 188

Query: 724  YMAKSLGLEENYFHSAVQENAPTFLRFNYYPPCSRPDLVYGVKPHADGGAITILLQDKEV 903
             MAKSL LEEN F S   E A    RFN+Y  C RPDLV GVKPH+D   IT+LLQDKEV
Sbjct: 189  AMAKSLNLEENSFSSRFGERAVMQTRFNFYLSCPRPDLVLGVKPHSDRSGITVLLQDKEV 248

Query: 904  EGLQILKDGNWIKVPIVPHALLVNVADQVEIMSNGVFRSVVHRVITNTEKPRFSLAMFYV 1083
            EGLQ+ KD  W KVP++PHAL+VN+ DQ++IMSNG+F+S +HRV+TN+E+ R S+AMF  
Sbjct: 249  EGLQVFKDDKWFKVPVIPHALVVNLGDQMQIMSNGIFKSPIHRVVTNSERMRISVAMFNE 308

Query: 1084 PEKEIDIEPAKDLITESKPRLFKKMKSEEYGELYFQSSSRGMRGIDNARV 1233
            PE E +I P + LI E +PRL++ +K+  Y    F+   +G+  +++A++
Sbjct: 309  PEPEKEIGPVEGLIDEKRPRLYRDVKN--YASFNFECFQKGVVPLESAKI 356


>emb|CAN68790.1| hypothetical protein VITISV_001365 [Vitis vinifera]
          Length = 357

 Score =  342 bits (877), Expect = 2e-91
 Identities = 165/351 (47%), Positives = 244/351 (69%), Gaps = 2/351 (0%)
 Frame = +1

Query: 187  LEKQVQELSINGDEPPPRFIRRDKDAVPINTSLSSS-IPIIDLHVLXXXXXXXEEKDNEM 363
            L + VQE+S+NG+EPPP++  ++    P+++ L S  IPIID+ +L       +  + E+
Sbjct: 13   LAQSVQEMSVNGNEPPPQYFLKENSIQPMDSFLPSDPIPIIDISLLSSSSLSSKGGEEEL 72

Query: 364  EKLKLALSTWGFFQA-IGHNIPSSLLDEMQRKANDFFDLPMEEKKKYSINYDGKQDYLQG 540
            +KLK  L +WG FQ  +GH + SS LD+++     FF LP+EEK+KYS   DG    ++G
Sbjct: 73   QKLKSTLISWGCFQVLVGHGLSSSFLDKVREVGKQFFALPVEEKEKYSRATDG----IEG 128

Query: 541  YGNDLVVSEDQLIDWSDRLYLLIKPLDQREYKHWPDNPNGFRKIINEYSMKTHLVAEIVL 720
            YGND ++SE+Q++DWS RL+L ++P+DQR+ + WP NP  FR++++EY  K  ++ +++ 
Sbjct: 129  YGNDPILSENQVLDWSYRLFLRLQPVDQRKLRLWPXNPTEFREVLDEYGTKVKIIMDVLF 188

Query: 721  KYMAKSLGLEENYFHSAVQENAPTFLRFNYYPPCSRPDLVYGVKPHADGGAITILLQDKE 900
            K MAKSL LEEN F S   E A    RFN+Y  C RPDLV GVKPH+D   IT+LLQDKE
Sbjct: 189  KAMAKSLNLEENSFSSRFGERAVMQTRFNFYLSCPRPDLVLGVKPHSDRSGITVLLQDKE 248

Query: 901  VEGLQILKDGNWIKVPIVPHALLVNVADQVEIMSNGVFRSVVHRVITNTEKPRFSLAMFY 1080
            VEGLQ+ KD  W KVP++PHAL+VN+ DQ++IMSNG+F+S +HRV+TN+E+ R S+AMF 
Sbjct: 249  VEGLQVFKDDKWFKVPVIPHALVVNLGDQMQIMSNGIFKSPIHRVVTNSERMRISVAMFN 308

Query: 1081 VPEKEIDIEPAKDLITESKPRLFKKMKSEEYGELYFQSSSRGMRGIDNARV 1233
             PE E +I P + LI E +PRL++ +K+  Y    F+   +G+  +++A++
Sbjct: 309  EPEPEKEIGPVEGLIDEKRPRLYRDVKN--YASFNFECFQKGVVPLESAKI 357


Top