BLASTX nr result

ID: Coptis25_contig00015662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015662
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173402.1| hypothetical protein NitaMp056 [Nicotiana tabac...   151   6e-35
ref|XP_003588292.1| NADH-ubiquinone oxidoreductase chain [Medica...   142   4e-32
ref|XP_003588285.1| NADH-ubiquinone oxidoreductase chain [Medica...   142   4e-32
ref|XP_004153710.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquin...   140   1e-31
ref|XP_004153322.1| PREDICTED: NADH-ubiquinone oxidoreductase ch...   140   1e-31

>ref|YP_173402.1| hypothetical protein NitaMp056 [Nicotiana tabacum]
           gi|56806565|dbj|BAD83466.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 142

 Score =  151 bits (381), Expect = 6e-35
 Identities = 78/83 (93%), Positives = 78/83 (93%)
 Frame = -1

Query: 251 IPLFPVLVMFFIPRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSSLLAEANVPGSR 72
           IPLFPVLVMFFI RLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSSLLAEANVPGSR
Sbjct: 55  IPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSSLLAEANVPGSR 114

Query: 71  GLILTETRGGSLPTSKSKIFLKP 3
           GLILTETRGGSLPTSK  I  KP
Sbjct: 115 GLILTETRGGSLPTSKYSILGKP 137


>ref|XP_003588292.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477340|gb|AES58543.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 335

 Score =  142 bits (357), Expect = 4e-32
 Identities = 72/74 (97%), Positives = 72/74 (97%)
 Frame = -1

Query: 251 IPLFPVLVMFFIPRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSSLLAEANVPGSR 72
           IPLFPVLVMFFI RLAETNRAPFDLPEAEAESVAGYNVEYARDAILNS LLAEANVPGSR
Sbjct: 262 IPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSR 321

Query: 71  GLILTETRGGSLPT 30
           GLILTETRGGSLPT
Sbjct: 322 GLILTETRGGSLPT 335


>ref|XP_003588285.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477333|gb|AES58536.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 128

 Score =  142 bits (357), Expect = 4e-32
 Identities = 72/74 (97%), Positives = 72/74 (97%)
 Frame = -1

Query: 251 IPLFPVLVMFFIPRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSSLLAEANVPGSR 72
           IPLFPVLVMFFI RLAETNRAPFDLPEAEAESVAGYNVEYARDAILNS LLAEANVPGSR
Sbjct: 55  IPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSR 114

Query: 71  GLILTETRGGSLPT 30
           GLILTETRGGSLPT
Sbjct: 115 GLILTETRGGSLPT 128


>ref|XP_004153710.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquinone oxidoreductase
           chain 1-like [Cucumis sativus]
          Length = 166

 Score =  140 bits (352), Expect = 1e-31
 Identities = 71/73 (97%), Positives = 71/73 (97%)
 Frame = -1

Query: 251 IPLFPVLVMFFIPRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSSLLAEANVPGSR 72
           IPLFPVLVMFFI RLAETNRAPFDLPEAEAESVAGYNVEYARDAILNS LLAEANVPGSR
Sbjct: 56  IPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSR 115

Query: 71  GLILTETRGGSLP 33
           GLILTETRGGSLP
Sbjct: 116 GLILTETRGGSLP 128


>ref|XP_004153322.1| PREDICTED: NADH-ubiquinone oxidoreductase chain 1-like, partial
           [Cucumis sativus] gi|449472154|ref|XP_004153510.1|
           PREDICTED: NADH-ubiquinone oxidoreductase chain 1-like,
           partial [Cucumis sativus]
           gi|449473509|ref|XP_004153902.1| PREDICTED:
           NADH-ubiquinone oxidoreductase chain 1-like, partial
           [Cucumis sativus] gi|449529808|ref|XP_004171890.1|
           PREDICTED: NADH-ubiquinone oxidoreductase chain 1-like,
           partial [Cucumis sativus]
          Length = 135

 Score =  140 bits (352), Expect = 1e-31
 Identities = 71/73 (97%), Positives = 71/73 (97%)
 Frame = -1

Query: 251 IPLFPVLVMFFIPRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSSLLAEANVPGSR 72
           IPLFPVLVMFFI RLAETNRAPFDLPEAEAESVAGYNVEYARDAILNS LLAEANVPGSR
Sbjct: 56  IPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSR 115

Query: 71  GLILTETRGGSLP 33
           GLILTETRGGSLP
Sbjct: 116 GLILTETRGGSLP 128


Top