BLASTX nr result

ID: Coptis25_contig00015640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015640
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271867.1| PREDICTED: uncharacterized protein LOC100263...    62   4e-08
emb|CAN65474.1| hypothetical protein VITISV_018244 [Vitis vinifera]    62   4e-08
ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241...    59   4e-07
ref|XP_002271898.1| PREDICTED: uncharacterized protein LOC100258...    59   5e-07

>ref|XP_002271867.1| PREDICTED: uncharacterized protein LOC100263451 [Vitis vinifera]
          Length = 412

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/91 (37%), Positives = 56/91 (61%)
 Frame = -2

Query: 287 EENVISAIIKVGSVEFLRLDPQKHLVPKVQILRDLGVPDSSITKIILIGHRACWQENDNF 108
           ++ V+SA  +   + FL  D  K++VPK+  L+++GVP+SS+  +I         ++D F
Sbjct: 179 DKRVVSAFKRSPRI-FLE-DVNKYIVPKITALQEIGVPESSVVFLITHYSNVVQVKHDKF 236

Query: 107 SDAVKEVLEMGFDPSGKMFVYAVRDLSSMCK 15
            + VKEV+EMGFDP   +F+ A+  L+ M K
Sbjct: 237 HEIVKEVMEMGFDPLKMVFIKAIHVLAGMSK 267


>emb|CAN65474.1| hypothetical protein VITISV_018244 [Vitis vinifera]
          Length = 455

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/91 (37%), Positives = 56/91 (61%)
 Frame = -2

Query: 287 EENVISAIIKVGSVEFLRLDPQKHLVPKVQILRDLGVPDSSITKIILIGHRACWQENDNF 108
           ++ V+SA  +   + FL  D  K++VPK+  L+++GVP+SS+  +I         ++D F
Sbjct: 179 DKRVVSAFKRSPRI-FLE-DVNKYIVPKITALQEIGVPESSVVFLITHYSNVVQVKHDKF 236

Query: 107 SDAVKEVLEMGFDPSGKMFVYAVRDLSSMCK 15
            + VKEV+EMGFDP   +F+ A+  L+ M K
Sbjct: 237 HEIVKEVMEMGFDPLKMVFIKAIHVLAGMSK 267


>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/93 (36%), Positives = 55/93 (59%)
 Frame = -2

Query: 296 LPREENVISAIIKVGSVEFLRLDPQKHLVPKVQILRDLGVPDSSITKIILIGHRACWQEN 117
           L  +E ++SA  +   + FL  D  K+L+P +++LR +GVP S I+ ++     A  + +
Sbjct: 176 LRSDEKIVSAFKRTTWI-FLE-DLSKNLIPNLELLRKVGVPQSCISLLLTHFPEAMMENH 233

Query: 116 DNFSDAVKEVLEMGFDPSGKMFVYAVRDLSSMC 18
           + FS+ V+EV +MGFDP+   FV AV  L   C
Sbjct: 234 EEFSENVEEVRKMGFDPNKSTFVLAVHALCGKC 266


>ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241175 [Vitis vinifera]
          Length = 410

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/95 (35%), Positives = 56/95 (58%)
 Frame = -2

Query: 287 EENVISAIIKVGSVEFLRLDPQKHLVPKVQILRDLGVPDSSITKIILIGHRACWQENDNF 108
           +  V+SAI +   + FL  D  K++VP +  L+++GVP+SSI  +I         ++D F
Sbjct: 177 DNRVVSAIKRSPRI-FLE-DVNKNIVPNITALQEIGVPESSIVFLITYYPIVVQLKHDRF 234

Query: 107 SDAVKEVLEMGFDPSGKMFVYAVRDLSSMCKAKRE 3
            + VK+V+EMGFDP   +F+ A++    M K+  E
Sbjct: 235 GETVKKVMEMGFDPLTVVFIKAIQVFGGMSKSTWE 269


>ref|XP_002271898.1| PREDICTED: uncharacterized protein LOC100258309 [Vitis vinifera]
           gi|297744182|emb|CBI37152.3| unnamed protein product
           [Vitis vinifera]
          Length = 412

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/95 (34%), Positives = 56/95 (58%)
 Frame = -2

Query: 287 EENVISAIIKVGSVEFLRLDPQKHLVPKVQILRDLGVPDSSITKIILIGHRACWQENDNF 108
           ++ V+SA  +  S   L  + +K++VPK+  L+++GVP SS+  +I         +ND F
Sbjct: 179 DKTVVSACKR--SPRILLENVKKNIVPKITALQEIGVPQSSVVFLIKHYPYVVQLKNDKF 236

Query: 107 SDAVKEVLEMGFDPSGKMFVYAVRDLSSMCKAKRE 3
            + VKEV+E GFDP   +F+ A++  + M K+  E
Sbjct: 237 HEIVKEVMESGFDPLKMVFITAIQVFAGMSKSTWE 271


Top