BLASTX nr result

ID: Coptis25_contig00015638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015638
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   173   1e-41
ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   171   6e-41
ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   168   4e-40
emb|CAN62402.1| hypothetical protein VITISV_000986 [Vitis vinifera]   167   6e-40
ref|XP_002280862.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   166   1e-39

>ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 3
           [Vitis vinifera]
          Length = 673

 Score =  173 bits (439), Expect = 1e-41
 Identities = 83/138 (60%), Positives = 105/138 (76%), Gaps = 1/138 (0%)
 Frame = +1

Query: 4   GVTKIPRIFVTPTDDLVTKPTSDDVQLKVPLIDLEGFDKDDAKRNKVIEEVRRASETWGF 183
           GV+K+PR+F+ P D+L T  T    Q   P++DL+G D D  +RNK+++ VR ASETWGF
Sbjct: 37  GVSKVPRMFIQPPDNLRTYTT----QFNFPVVDLQGMDNDPIRRNKIVDMVRDASETWGF 92

Query: 184 FLLVNHGIPTDVLDEMIEGVRRFNEQPNEVKSKYYTRDLT-KKVVYNSNFDLYQAPATNW 360
           F +VNHGIP  VL+EM+EGVRRF+EQ  EVK ++YTRD + KKV+YNSNFDLY APA NW
Sbjct: 93  FNVVNHGIPVSVLEEMMEGVRRFHEQDTEVKKQFYTRDASRKKVMYNSNFDLYTAPAANW 152

Query: 361 RDTIFFIMAPDHLNPEEL 414
           RDT + +MAP   NPEEL
Sbjct: 153 RDTFYCLMAPHPPNPEEL 170



 Score =  147 bits (371), Expect = 9e-34
 Identities = 67/108 (62%), Positives = 86/108 (79%)
 Frame = +1

Query: 91  PLIDLEGFDKDDAKRNKVIEEVRRASETWGFFLLVNHGIPTDVLDEMIEGVRRFNEQPNE 270
           P+IDL+  + D A+R ++++ VR ASETWGFF +VNHGI   VL+EM +GVRRF EQ  E
Sbjct: 371 PVIDLQDMNTDPARRKEIVDMVRDASETWGFFNVVNHGISVTVLEEMKDGVRRFYEQDTE 430

Query: 271 VKSKYYTRDLTKKVVYNSNFDLYQAPATNWRDTIFFIMAPDHLNPEEL 414
           VK +YY+RDL +KVVYNSNFDLY+APA NWRDT +F+MAP   +P+EL
Sbjct: 431 VKKQYYSRDLERKVVYNSNFDLYKAPAANWRDTFYFLMAPQPPDPQEL 478


>ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 363

 Score =  171 bits (433), Expect = 6e-41
 Identities = 79/137 (57%), Positives = 101/137 (73%)
 Frame = +1

Query: 4   GVTKIPRIFVTPTDDLVTKPTSDDVQLKVPLIDLEGFDKDDAKRNKVIEEVRRASETWGF 183
           GV+K+PR+F+ P D+        + Q K P+IDL G D D  +R K++E VR ASETWG 
Sbjct: 36  GVSKVPRMFIRPPDN----SRDCNTQFKFPVIDLHGMDSDPIRRKKIVEMVREASETWGL 91

Query: 184 FLLVNHGIPTDVLDEMIEGVRRFNEQPNEVKSKYYTRDLTKKVVYNSNFDLYQAPATNWR 363
           F +VNHGIP  VL+EM++GV RF EQ NEVK ++YTRDLT+KV+YNSNFDLY + A NWR
Sbjct: 92  FTVVNHGIPVSVLEEMMDGVHRFYEQDNEVKKEFYTRDLTRKVIYNSNFDLYVSKAANWR 151

Query: 364 DTIFFIMAPDHLNPEEL 414
           DT + +MAP  LNP+EL
Sbjct: 152 DTFYCLMAPHPLNPQEL 168


>ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera] gi|147807864|emb|CAN66433.1|
           hypothetical protein VITISV_027452 [Vitis vinifera]
          Length = 365

 Score =  168 bits (426), Expect = 4e-40
 Identities = 81/138 (58%), Positives = 103/138 (74%), Gaps = 1/138 (0%)
 Frame = +1

Query: 4   GVTKIPRIFVTPTDDLVTKPTSDDVQLKVPLIDLEGFDKDDAKRNKVIEEVRRASETWGF 183
           GV+K+PR+F+ P D+L T  T    Q   P++DL+G D D  +RNK+++ V+ ASETWGF
Sbjct: 37  GVSKVPRMFIQPPDNLRTYTT----QFNFPVVDLQGMDNDPIRRNKIVDMVKDASETWGF 92

Query: 184 FLLVNHGIPTDVLDEMIEGVRRFNEQPNEVKSKYYTRDLT-KKVVYNSNFDLYQAPATNW 360
           F +VNHGIP  VL+EM+EGV RF EQ  EVK ++YTRD + KK+VYNSNFDLY APA NW
Sbjct: 93  FNVVNHGIPVSVLEEMMEGVLRFYEQDTEVKKQFYTRDASRKKMVYNSNFDLYTAPAANW 152

Query: 361 RDTIFFIMAPDHLNPEEL 414
           RDT + +MAP   NPEEL
Sbjct: 153 RDTFYCLMAPHPPNPEEL 170


>emb|CAN62402.1| hypothetical protein VITISV_000986 [Vitis vinifera]
          Length = 367

 Score =  167 bits (424), Expect = 6e-40
 Identities = 78/137 (56%), Positives = 103/137 (75%)
 Frame = +1

Query: 4   GVTKIPRIFVTPTDDLVTKPTSDDVQLKVPLIDLEGFDKDDAKRNKVIEEVRRASETWGF 183
           GV+++PRIF+ P DD     T+ D +   P+IDL+  + D A+R ++++ VR ASETWGF
Sbjct: 40  GVSQVPRIFIQPPDDF----TTGDTKFSFPVIDLQDMNTDPARRKEIVDMVRDASETWGF 95

Query: 184 FLLVNHGIPTDVLDEMIEGVRRFNEQPNEVKSKYYTRDLTKKVVYNSNFDLYQAPATNWR 363
           F +VNHGI   VL+EM +GVRRF EQ  EVK +YY+RDL +KVVYNSNFDLY+APA NWR
Sbjct: 96  FNVVNHGISVTVLEEMKDGVRRFYEQDTEVKKQYYSRDLERKVVYNSNFDLYKAPAANWR 155

Query: 364 DTIFFIMAPDHLNPEEL 414
           DT +F+MAP   +P+EL
Sbjct: 156 DTFYFLMAPQPPDPQEL 172


>ref|XP_002280862.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
           [Vitis vinifera]
          Length = 319

 Score =  166 bits (421), Expect = 1e-39
 Identities = 81/137 (59%), Positives = 102/137 (74%)
 Frame = +1

Query: 4   GVTKIPRIFVTPTDDLVTKPTSDDVQLKVPLIDLEGFDKDDAKRNKVIEEVRRASETWGF 183
           GV+K+PR+F+ P D+L T  T    Q   P+IDL G D D  +R +++E VR ASETW F
Sbjct: 36  GVSKVPRMFIQPPDNLRTCNT----QFNFPVIDLHGMDNDPIRRKEIVEMVREASETWCF 91

Query: 184 FLLVNHGIPTDVLDEMIEGVRRFNEQPNEVKSKYYTRDLTKKVVYNSNFDLYQAPATNWR 363
           F +VNHGIP  VL+EM++G RRF EQ NEVK ++YTRD T+KVVYNSNFDLY + ATNWR
Sbjct: 92  FTVVNHGIPVSVLEEMMDGARRFYEQDNEVK-EFYTRDRTRKVVYNSNFDLYVSKATNWR 150

Query: 364 DTIFFIMAPDHLNPEEL 414
           DT + +MAP  LNP+EL
Sbjct: 151 DTFYCVMAPHPLNPQEL 167


Top