BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015626
         (974 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631864.1| PREDICTED: riboflavin biosynthesis protein R...   479   e-133
emb|CAN60371.1| hypothetical protein VITISV_041263 [Vitis vinifera]   474   e-131
ref|XP_002325472.1| predicted protein [Populus trichocarpa] gi|2...   456   e-126
ref|XP_003624183.1| Swarming motility protein ybiA [Medicago tru...   452   e-125
ref|XP_002514838.1| riboflavin-specific deaminase, putative [Ric...   451   e-124

>ref|XP_003631864.1| PREDICTED: riboflavin biosynthesis protein RibD-like [Vitis
           vinifera] gi|297735254|emb|CBI17616.3| unnamed protein
           product [Vitis vinifera]
          Length = 586

 Score =  479 bits (1233), Expect = e-133
 Identities = 236/296 (79%), Positives = 267/296 (90%), Gaps = 4/296 (1%)
 Frame = +1

Query: 94  CKA--NNNH--TLEANYIKRAAEIADKSAGFTSPHPNFGCVIAVGNNVVGEGFLYAQGTK 261
           CKA  NNNH   L++ +++RAAEIADKSAGFTSPHPNFGCVIA    VVGEG+LYAQGTK
Sbjct: 11  CKATTNNNHPHALDSFHVRRAAEIADKSAGFTSPHPNFGCVIATAGKVVGEGYLYAQGTK 70

Query: 262 CAELQAVEEGGELCRGATAYLNMEPGDCHGDQTSVSSLIKAGISRVVVGVRHPLQHLRGK 441
            AE+QAVE  GELCRGATAYLNMEPGDCHGD+T+VS+L+KAGI+R VVG+RHPLQHLR  
Sbjct: 71  PAEVQAVEAAGELCRGATAYLNMEPGDCHGDRTAVSALVKAGITRAVVGIRHPLQHLRSH 130

Query: 442 GILSLRHQGLRVDVAGEDLQSKAIQEALKSCFLVNAPLLYRAASRVPFSVLKYAMTLDGK 621
            + ++R +GL+VDV GEDL+SK ++EALKSC +VNAPL+YRAASRVPFSVLKYAMTLDGK
Sbjct: 131 ALRAMRSEGLQVDVLGEDLKSKIVEEALKSCLIVNAPLIYRAASRVPFSVLKYAMTLDGK 190

Query: 622 IAASSGHASWISSKQSRNRVFELRGRSDAVIVGGNTVRRDDPRLTARHGGGHFPVRIVMS 801
           IAASSGHASWISSK+SR RVFELRGRSDA++VGGNTVR+D+PRLTARHGGGH P+RIVMS
Sbjct: 191 IAASSGHASWISSKESRYRVFELRGRSDAIVVGGNTVRKDNPRLTARHGGGHVPIRIVMS 250

Query: 802 QTLNLPEVANLWDVSEARTIVVTQRGARRSFQKLLASKGVEVVEFDILNPRDVMEY 969
           +TLNLPEVANLWDVS   TIVVTQRGAR+SFQK LASKGVEVVEFDILN RDVMEY
Sbjct: 251 RTLNLPEVANLWDVSSVPTIVVTQRGARKSFQKFLASKGVEVVEFDILNTRDVMEY 306


>emb|CAN60371.1| hypothetical protein VITISV_041263 [Vitis vinifera]
          Length = 587

 Score =  474 bits (1221), Expect = e-131
 Identities = 234/296 (79%), Positives = 266/296 (89%), Gaps = 4/296 (1%)
 Frame = +1

Query: 94  CKA--NNNH--TLEANYIKRAAEIADKSAGFTSPHPNFGCVIAVGNNVVGEGFLYAQGTK 261
           CKA  NNNH   L++ +++RAAEIADKSAGFTSPHPNFGCVIA    VVGEG+LYAQGTK
Sbjct: 11  CKATTNNNHPHALDSFHVRRAAEIADKSAGFTSPHPNFGCVIATAGKVVGEGYLYAQGTK 70

Query: 262 CAELQAVEEGGELCRGATAYLNMEPGDCHGDQTSVSSLIKAGISRVVVGVRHPLQHLRGK 441
            AE+QAVE  GELCRGATAYLNMEPGDCHGD+T+VS+L+KAGI+R VVG+RHPLQHLR  
Sbjct: 71  PAEVQAVEAAGELCRGATAYLNMEPGDCHGDRTAVSALVKAGITRXVVGIRHPLQHLRSH 130

Query: 442 GILSLRHQGLRVDVAGEDLQSKAIQEALKSCFLVNAPLLYRAASRVPFSVLKYAMTLDGK 621
            + ++R +GL+VDV GEDL+SK ++EALKSC +VNAPL+YRAASRVPFSVLKYAMTLDGK
Sbjct: 131 ALRAMRSEGLQVDVLGEDLKSKIVEEALKSCLIVNAPLIYRAASRVPFSVLKYAMTLDGK 190

Query: 622 IAASSGHASWISSKQSRNRVFELRGRSDAVIVGGNTVRRDDPRLTARHGGGHFPVRIVMS 801
           IAASSGHASWISSK+SR RVFELRGRSDA++VGGNTVR+D+P+LTARHGGGH P+RIVMS
Sbjct: 191 IAASSGHASWISSKESRYRVFELRGRSDAIVVGGNTVRKDNPQLTARHGGGHVPIRIVMS 250

Query: 802 QTLNLPEVANLWDVSEARTIVVTQRGARRSFQKLLASKGVEVVEFDILNPRDVMEY 969
           +TLNLPEVANLWDVS   TIVVTQR AR+SFQK LASKGVEVVEFDILN RDVMEY
Sbjct: 251 RTLNLPEVANLWDVSSVPTIVVTQRXARKSFQKFLASKGVEVVEFDILNTRDVMEY 306


>ref|XP_002325472.1| predicted protein [Populus trichocarpa] gi|222862347|gb|EEE99853.1|
           predicted protein [Populus trichocarpa]
          Length = 592

 Score =  456 bits (1174), Expect = e-126
 Identities = 223/287 (77%), Positives = 258/287 (89%), Gaps = 1/287 (0%)
 Frame = +1

Query: 112 HTLEANYIKRAAEIADKSAGFTSPHPNFGCVIAVGNNVV-GEGFLYAQGTKCAELQAVEE 288
           H+L+A YIKRAA+IAD SAGF+SPHPNFGCVIA  + +V GEG+LYAQGTK AE+ AVE 
Sbjct: 32  HSLDAAYIKRAAQIADNSAGFSSPHPNFGCVIATTSGIVAGEGYLYAQGTKAAEVLAVEA 91

Query: 289 GGELCRGATAYLNMEPGDCHGDQTSVSSLIKAGISRVVVGVRHPLQHLRGKGILSLRHQG 468
            G   +G+TAYLNMEPGDCHGDQ++VS+L++AGI+RVVVG+RHPLQHL G  I SLR QG
Sbjct: 92  AGGFSKGSTAYLNMEPGDCHGDQSAVSALVQAGITRVVVGIRHPLQHLHGNAIRSLRGQG 151

Query: 469 LRVDVAGEDLQSKAIQEALKSCFLVNAPLLYRAASRVPFSVLKYAMTLDGKIAASSGHAS 648
           L+VDV GEDL+SK ++EA KSC LVNAPL++RA S+VPFSVLKYAMTLDGKIA +SGHA+
Sbjct: 152 LQVDVVGEDLKSKIMEEARKSCLLVNAPLIHRATSQVPFSVLKYAMTLDGKIATTSGHAT 211

Query: 649 WISSKQSRNRVFELRGRSDAVIVGGNTVRRDDPRLTARHGGGHFPVRIVMSQTLNLPEVA 828
           WISSK+SRNRVFELRGRSDA+IVGGNTVR+D+PRLTARHGGGH P+RIVM+QT NLPE A
Sbjct: 212 WISSKKSRNRVFELRGRSDAIIVGGNTVRKDNPRLTARHGGGHTPIRIVMTQTFNLPEEA 271

Query: 829 NLWDVSEARTIVVTQRGARRSFQKLLASKGVEVVEFDILNPRDVMEY 969
           NLWD+S+  TIVVTQRGARRSFQKLLASKGVEVVEFDILNPR+VMEY
Sbjct: 272 NLWDISDVSTIVVTQRGARRSFQKLLASKGVEVVEFDILNPREVMEY 318


>ref|XP_003624183.1| Swarming motility protein ybiA [Medicago truncatula]
           gi|355499198|gb|AES80401.1| Swarming motility protein
           ybiA [Medicago truncatula]
          Length = 1648

 Score =  452 bits (1164), Expect = e-125
 Identities = 226/296 (76%), Positives = 254/296 (85%), Gaps = 4/296 (1%)
 Frame = +1

Query: 94  CKANN---NHTLEANYIKRAAEIADKSAGFTSPHPNFGCVIAV-GNNVVGEGFLYAQGTK 261
           CKA+N   NH L+A YI+RAA IADKSAGFTSPHPNFGCVIA    +V GEG+LYAQGT 
Sbjct: 20  CKASNDTHNHALDAGYIRRAALIADKSAGFTSPHPNFGCVIATPSGDVAGEGYLYAQGTS 79

Query: 262 CAELQAVEEGGELCRGATAYLNMEPGDCHGDQTSVSSLIKAGISRVVVGVRHPLQHLRGK 441
            AE+QAV   GE CRGATAYLNMEPGDC GD T+VS+L++ G+ RVV+G+RHPLQH RG 
Sbjct: 80  PAEVQAVTSAGERCRGATAYLNMEPGDCDGDNTAVSALLQGGVKRVVIGMRHPLQHFRGN 139

Query: 442 GILSLRHQGLRVDVAGEDLQSKAIQEALKSCFLVNAPLLYRAASRVPFSVLKYAMTLDGK 621
            + +LR QGL+VD+ GEDL SK I++A K C LVNAPL+ RA+SRVPFSVLKYAMTLDGK
Sbjct: 140 AVRALRSQGLQVDLLGEDLTSKIIEDAQKECLLVNAPLICRASSRVPFSVLKYAMTLDGK 199

Query: 622 IAASSGHASWISSKQSRNRVFELRGRSDAVIVGGNTVRRDDPRLTARHGGGHFPVRIVMS 801
           IAAS+GHA WIS KQSRN VFELR RSDA+IVGGNTVRRD+PRLTARHGGGH P+RIVMS
Sbjct: 200 IAASTGHAWWISCKQSRNLVFELRARSDAIIVGGNTVRRDNPRLTARHGGGHMPIRIVMS 259

Query: 802 QTLNLPEVANLWDVSEARTIVVTQRGARRSFQKLLASKGVEVVEFDILNPRDVMEY 969
           Q+L+LPE ANLWD+SE  TIVVTQRGARRS QKLLASKGVEVVEFDILNPRDVMEY
Sbjct: 260 QSLDLPEEANLWDMSEVSTIVVTQRGARRSLQKLLASKGVEVVEFDILNPRDVMEY 315


>ref|XP_002514838.1| riboflavin-specific deaminase, putative [Ricinus communis]
           gi|223545889|gb|EEF47392.1| riboflavin-specific
           deaminase, putative [Ricinus communis]
          Length = 600

 Score =  451 bits (1160), Expect = e-124
 Identities = 222/290 (76%), Positives = 259/290 (89%), Gaps = 1/290 (0%)
 Frame = +1

Query: 103 NNNHTLEANYIKRAAEIADKSAGFTSPHPNFGCVIAVGN-NVVGEGFLYAQGTKCAELQA 279
           N++H  +A +IKRAAE+ADKSAG TSPHPNFGCVIA    NV GEG+LYAQGTK AE+QA
Sbjct: 31  NHSHCSDAAFIKRAAELADKSAGCTSPHPNFGCVIATATGNVAGEGYLYAQGTKPAEVQA 90

Query: 280 VEEGGELCRGATAYLNMEPGDCHGDQTSVSSLIKAGISRVVVGVRHPLQHLRGKGILSLR 459
           VE  GE  +GATAYLN+EPGDCHGD T+VSSL++AGI+RVVVG+RHPL+HL+G  + +LR
Sbjct: 91  VEAAGEWSKGATAYLNLEPGDCHGDHTAVSSLVQAGITRVVVGIRHPLRHLQGNAVHALR 150

Query: 460 HQGLRVDVAGEDLQSKAIQEALKSCFLVNAPLLYRAASRVPFSVLKYAMTLDGKIAASSG 639
           + GL+V+V GEDLQSK I++A KSC LVNAPL++RA SRVPFSVLKYAMTLDGKIAASSG
Sbjct: 151 NHGLQVEVLGEDLQSKIIEDARKSCLLVNAPLIHRATSRVPFSVLKYAMTLDGKIAASSG 210

Query: 640 HASWISSKQSRNRVFELRGRSDAVIVGGNTVRRDDPRLTARHGGGHFPVRIVMSQTLNLP 819
           HA+W+SS++SRNRVFELR RSDA+IVGGNTVRRD+PRLTARHGG + P+RIVMSQTL+LP
Sbjct: 211 HAAWVSSRKSRNRVFELRSRSDAIIVGGNTVRRDNPRLTARHGGEYMPMRIVMSQTLDLP 270

Query: 820 EVANLWDVSEARTIVVTQRGARRSFQKLLASKGVEVVEFDILNPRDVMEY 969
           E ANLWDV +  TIVVTQRGARRSFQKLLASKGVEVVEF+ILNPR+VMEY
Sbjct: 271 EEANLWDVCDVSTIVVTQRGARRSFQKLLASKGVEVVEFEILNPREVMEY 320