BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015588
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323442.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
ref|XP_002273989.2| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32
emb|CBI32643.3| unnamed protein product [Vitis vinifera]              142   3e-32
ref|XP_002525213.1| pentatricopeptide repeat-containing protein,...   140   1e-31
ref|XP_003624377.1| Pentatricopeptide repeat-containing protein ...   128   6e-28

>ref|XP_002323442.1| predicted protein [Populus trichocarpa] gi|222868072|gb|EEF05203.1|
           predicted protein [Populus trichocarpa]
          Length = 526

 Score =  145 bits (365), Expect = 4e-33
 Identities = 72/105 (68%), Positives = 80/105 (76%)
 Frame = +1

Query: 1   GEVLIGIEAAENRLLLVPSCTATHVQLVNLYANAGRWEQVARVRKLMKDRGLKTYPGCSW 180
           G V IGI+AAEN LLL P C ATHVQL NLYA+ G W+Q ARVRKLMKDR LKT PGCSW
Sbjct: 411 GSVWIGIQAAENTLLLEPECAATHVQLANLYASVGFWDQAARVRKLMKDRRLKTNPGCSW 470

Query: 181 IEIKNEVYKFRAEDRSNARVDEILAVVDSLIDNMRRFSHVPEVHE 315
           IEIKNEVY+FRAED SN RV EI  V+D L+D+M      PE+ E
Sbjct: 471 IEIKNEVYRFRAEDCSNTRVSEIHDVLDWLVDHMITLGRAPEMQE 515


>ref|XP_002273989.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37320-like [Vitis vinifera]
          Length = 510

 Score =  142 bits (358), Expect = 3e-32
 Identities = 69/109 (63%), Positives = 85/109 (77%)
 Frame = +1

Query: 1   GEVLIGIEAAENRLLLVPSCTATHVQLVNLYANAGRWEQVARVRKLMKDRGLKTYPGCSW 180
           G V +GIEAAENRLLL P C ATH+QL +LYA+ G W+Q ARVRKLMK +GLKT PGCSW
Sbjct: 396 GSVWLGIEAAENRLLLEPECAATHLQLASLYASVGCWDQAARVRKLMKGKGLKTEPGCSW 455

Query: 181 IEIKNEVYKFRAEDRSNARVDEILAVVDSLIDNMRRFSHVPEVHEEGLD 327
           IE++NE+Y+FRAE+ SN  + EI AVVDSL D+MR   +  ++HEE  D
Sbjct: 456 IEVRNEIYRFRAEEWSNGGLTEISAVVDSLADHMRSLGY--DMHEEEAD 502


>emb|CBI32643.3| unnamed protein product [Vitis vinifera]
          Length = 1400

 Score =  142 bits (358), Expect = 3e-32
 Identities = 69/109 (63%), Positives = 85/109 (77%)
 Frame = +1

Query: 1    GEVLIGIEAAENRLLLVPSCTATHVQLVNLYANAGRWEQVARVRKLMKDRGLKTYPGCSW 180
            G V +GIEAAENRLLL P C ATH+QL +LYA+ G W+Q ARVRKLMK +GLKT PGCSW
Sbjct: 1257 GSVWLGIEAAENRLLLEPECAATHLQLASLYASVGCWDQAARVRKLMKGKGLKTEPGCSW 1316

Query: 181  IEIKNEVYKFRAEDRSNARVDEILAVVDSLIDNMRRFSHVPEVHEEGLD 327
            IE++NE+Y+FRAE+ SN  + EI AVVDSL D+MR   +  ++HEE  D
Sbjct: 1317 IEVRNEIYRFRAEEWSNGGLTEISAVVDSLADHMRSLGY--DMHEEEAD 1363


>ref|XP_002525213.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535510|gb|EEF37179.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 501

 Score =  140 bits (352), Expect = 1e-31
 Identities = 68/106 (64%), Positives = 84/106 (79%)
 Frame = +1

Query: 1   GEVLIGIEAAENRLLLVPSCTATHVQLVNLYANAGRWEQVARVRKLMKDRGLKTYPGCSW 180
           G V IGI+AAE RLLL P+C ATHVQL NLYA+   W++ A+VRK+MKD GLKT PG SW
Sbjct: 389 GSVWIGIQAAEQRLLLEPACAATHVQLANLYASVRYWDKAAKVRKVMKDTGLKTNPGYSW 448

Query: 181 IEIKNEVYKFRAEDRSNARVDEILAVVDSLIDNMRRFSHVPEVHEE 318
           IEIKN+V++FRAEDRSN RV EIL V+D L+D+M    +VPE+ +E
Sbjct: 449 IEIKNKVHRFRAEDRSNTRVGEILTVLDCLLDHMMILGYVPELIKE 494


>ref|XP_003624377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499392|gb|AES80595.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 487

 Score =  128 bits (321), Expect = 6e-28
 Identities = 60/106 (56%), Positives = 83/106 (78%)
 Frame = +1

Query: 1   GEVLIGIEAAENRLLLVPSCTATHVQLVNLYANAGRWEQVARVRKLMKDRGLKTYPGCSW 180
           G V IGI AAE+RL L P C++T +QL NLYA+ G W QVARVR+LMKD+GLK  PGCSW
Sbjct: 375 GNVWIGIRAAESRLSLEPGCSSTLLQLANLYASVGWWNQVARVRQLMKDKGLKPNPGCSW 434

Query: 181 IEIKNEVYKFRAEDRSNARVDEILAVVDSLIDNMRRFSHVPEVHEE 318
           IE+KN+V++F ++D+SN+R++ IL ++DSL+D+M   S   ++ EE
Sbjct: 435 IEVKNKVHRFESQDKSNSRMNGILLIMDSLVDHMSGLSLQFQISEE 480