BLASTX nr result

ID: Coptis25_contig00015585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015585
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277747.2| PREDICTED: zinc finger CCCH domain-containin...    39   1e-06

>ref|XP_002277747.2| PREDICTED: zinc finger CCCH domain-containing protein 30-like
           [Vitis vinifera]
          Length = 703

 Score = 39.3 bits (90), Expect(2) = 1e-06
 Identities = 20/25 (80%), Positives = 23/25 (92%), Gaps = 1/25 (4%)
 Frame = -1

Query: 82  PQSMEPISPMSSRA-VFSQREKLQQ 11
           P+SMEPISPMSSRA +F+QREK QQ
Sbjct: 550 PRSMEPISPMSSRASMFAQREKQQQ 574



 Score = 37.7 bits (86), Expect(2) = 1e-06
 Identities = 19/20 (95%), Positives = 19/20 (95%)
 Frame = -2

Query: 135 QFQQQQSMLSPINTNVFSPK 76
           QFQQQQSMLSPINTN FSPK
Sbjct: 513 QFQQQQSMLSPINTN-FSPK 531


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